BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg331037 Length=756 Score E Sequences producing significant alignments: (Bits) Value AT5G43680.1 | Symbols: | unknown protein; Has 30201 Blast hits... 1068 0.0 > AT5G43680.1 | Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:17544029-17545752 FORWARD LENGTH=1142 Length=1142 Score = 1068 bits (578), Expect = 0.0 Identities = 697/752 (93%), Gaps = 17/752 (2%) Strand=Plus/Plus Query 1 ATGCTTGGGCTTTCTTACGGTGAGCTCTTACTCATCATCGGTGCCACAGCTGCTGTTGTA 60 |||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||| Sbjct 46 ATGCTTGGGCTTTCTTACGGTGAGCTCTTACTCATCGTCGGCGCCACAGCTGCTCTTGTA 105 Query 61 GGACCCAAGGATCTTCCGATTATTGCTAGAGCAGGAGGAAGATTATTCGGACGAGCCATT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 106 GGACCCAAGGATCTTCCGATTATTGCTAGAGCAGGAGGAAGATTATTCGGACGAGCCATT 165 Query 121 GGTTACATCAATATGGCTCGTGGTCACTTGGATGGTGTCATGAAACAACCTCAGATGCAA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 166 GGTTACATCAATATGGCTCGTGGTCACTTGGATGGTGTCATGAAACAACCTCAGATGCAA 225 Query 181 GAGATATCGAAAGAAGTTCAAGATTTACGAGCACAAGTAGACGCGATTAGCCATGGAGCT 240 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 226 GAGATATCGAAAGAAGTTCAAGATTTACGAGCACAAGTAGATGCGATTAGCCATGGAGCA 285 Query 241 AGGTTTTCTTTATTTGATTCTAGTCCTTTGACTCGAAGAGTAGACAACCAAA---CTCCA 297 || |||||| ||||||||||||||||||||||||||||||| || ||||||| ||| | Sbjct 286 AGATTTTCTCTATTTGATTCTAGTCCTTTGACTCGAAGAGTGGATAACCAAAAAACTCAA 345 Query 298 GAACCTAGTCCAAGCACCACCAATGGGAATGTTACATCGGTTAATGTTGAAGAAAGACAG 357 |||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||| Sbjct 346 GAACCTAGTCCAAGCACCACCAATGGGATTGTTACATCCGTTAATGTTGAAGAAAAACAG 405 Query 358 AAGCCTGTAGATCATTATACAAAGGCGCAAGAATTTAGTGGCTCGTCTTCGGGTTCGGTT 417 |||||||||||||||||||||||||| |||||||||||||||||||| || | ||| ||| Sbjct 406 AAGCCTGTAGATCATTATACAAAGGCTCAAGAATTTAGTGGCTCGTCGTCAGCTTCTGTT 465 Query 418 AACCTGCACGCTCAAGCAACATCATTTGCACGATTATCTGAGACGGTCAGTGGAAAAAC- 476 |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| Sbjct 466 AACCTGCACGCTCAAGCAACATCATTTGCACGATTATCTGAGACAGTCAATGGAAAAACT 525 Query 477 CAACACTCTAATCAGCGATTCACCTGTTCTTCCTGTTTCAGCTGAGATGGCAAAGTTGCT 536 || || ||||| ||| ||||||||||||||||| || ||||||||||||||||||||||| Sbjct 526 CA-CAGTCTAAACAGTGATTCACCTGTTCTTCCAGTATCAGCTGAGATGGCAAAGTTGCT 584 Query 537 TCCTCAACGCAAAGAGAGTGCAAAAGGATCTGATTTAATGTTGGAGGCAGTTCTTGAAGC 596 ||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||| Sbjct 585 TCCTCAACGCAAAGAGAGTGCAAGAGGATCTGATTTAATGTTAGAGGCGGTTCTTGAAGC 644 Query 597 GGAAGTAGCACACAAGGCAAAAAGCTTTTTCGCACAAGCCGAAAAAGAAACTCCAGCTTT 656 |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct 645 GGAAGTAGCACACAAGGCGAAAAGCTTTTTCGCACAAGCCGAGAAAGAAACTCCAGCTTT 704 Query 657 AAAAGTGTTGCAGGGAAGTTTTTCAGTGACGGGAAAGGAGAAAGTTGAAGGCAA--GTTT 714 |||| | | | | ||||||||||||| |||||||||||| ||||| ||| |||| Sbjct 705 GAAAG-G--G-A---A-GTTTTTCAGTGACAGGAAAGGAGAAAATTGAACTCAAAAGTTT 756 Query 715 TGGGGATCTTCTCTTCGATCACAAGACACCGG 746 |||||| | || | ||||||||||||||||| Sbjct 757 TGGGGACCATCA-T-CGATCACAAGACACCGG 786 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 36721161457 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5