BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg331073 Length=1542 Score E Sequences producing significant alignments: (Bits) Value AT5G43240.1 | Symbols: | Protein of unknown function (DUF674) ... 1637 0.0 AT5G01120.1 | Symbols: | Protein of unknown function (DUF674) ... 1386 0.0 > AT5G43240.1 | Symbols: | Protein of unknown function (DUF674) | chr5:17352986-17355122 REVERSE LENGTH=1671 Length=1671 Score = 1637 bits (886), Expect = 0.0 Identities = 1350/1568 (86%), Gaps = 55/1568 (4%) Strand=Plus/Plus Query 1 ATGTCAGATGCTTTGAAGAATCCGGTGATTAAGTTGAAACTACTCATAGATGAAGAGAAA 60 ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 42 ATGTCAGCTACTTTGAAGAATCCGGTGATTAAGTTGAAACTACTCATAGATGAAGAGAAA 101 Query 61 AACAAGGTTGTATTCGCTGAGACGGGTAAAGATTTTGTCGATATACTCTTTAGTTTTATG 120 ||||| |||||||| | |||| |||||||||||||||||||| |||||||||||||| | Sbjct 102 AACAAAGTTGTATTTGTTGAGGCGGGTAAAGATTTTGTCGATTTACTCTTTAGTTTTTTT 161 Query 121 ACGTTGCCAATGGGAAAGATTGTTAGATTGATGGAGATGCATCAGAAGTCACA-ATCAAT 179 || ||||||||||||| ||||||||||||| |||||||| || |||||||||| | ||| Sbjct 162 ACTTTGCCAATGGGAACGATTGTTAGATTGCTGGAGATGTATAAGAAGTCACAGAA-AAT 220 Query 180 ATCAATAGGCTGTTTCAACAATATCTATGGAAGTGTTTTGAGTATGGGCAT-GAAGCATT 238 | ||||||||||||||| |||||| |||| ||||||| ||||||||||||| || ||||| Sbjct 221 AGCAATAGGCTGTTTCAGCAATATATATGCAAGTGTTGTGAGTATGGGCATTGA-GCATT 279 Query 239 TCAGGACTGAAGCTTGTAAGCAAATGCTTTTGTATCCGGGCAGTTTGAATCAGGAGAAAT 298 || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 280 TCTTGACTGAAGCTTGTAAGCAAATGCTTTTGTATCCGGGCAGTTTGAATCATGAGAAAT 339 Query 299 GTCGAAACCTCAAGATAAGGATAGATGATTCTGAG-CGTACAAAGTGTTTCATATGCCCT 357 |||||||||| ||| | ||| |||||||||| ||| | ||| |||| |||| | || ||| Sbjct 340 GTCGAAACCTTAAGCTGAGGGTAGATGATTCCGAGGC-TACCAAGTATTTCGTGTGTCCT 398 Query 358 ATGTTTGAGCGAAGCG-G-GCAATGT--TGTAAATGGTATAGCAATTTTAATACATCGAG 413 | ||||| | ||| || | ||||||| || ||| | || |||||||||||||| ||||| Sbjct 399 AAGTTTGTG-GAA-CGTGAGCAATGTACTG-AAA-GTTACAGCAATTTTAATACCTCGAG 454 Query 414 ATGTAGCTGTGG-GAATTTGATGGATGAAGTGATTCAGTTTCAAGGA-GAGGGAGTTGGA 471 |||||||||||| | ||||||| ||||||||| |||| || | ||| |||| || | Sbjct 455 ATGTAGCTGTGGTGT-TTTGATGAATGAAGTGACTCAGCTTGATGGAAGAGG-AGGCCTA 512 Query 472 GCTACAGT--AGGAAATGGTGCTGAAGGTGGAGTATTTGTGAGGAGTGATCATACTTCAT 529 || |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct 513 GC--CAGTGCAGGAAATGGTGTTGAAGGTGGAGTATTTGTTAGGAGTGATCATACTTCAT 570 Query 530 TCGTAATCACCGATGATTTGAAAGTGGAAGTTAGCTCTGTTGAG-TTAACACTTAACGTT 588 || | ||||| |||||||||||||||||| ||| ||||||| || || |||||||| ||| Sbjct 571 TCATGATCACTGATGATTTGAAAGTGGAAATTACCTCTGTT-AGGTTGACACTTAATGTT 629 Query 589 CTTAAAGATCTTGGCTACACT-GATTGT-AATAAGTTGGTTGAGATGATTTACAACTTTA 646 |||||||||||||||||| | |||||| || ||||||| ||||| |||| | || ||| Sbjct 630 CTTAAAGATCTTGGCTACG-TAGATTGTGAA-AAGTTGGATGAGAAGATTCATGACGTTA 687 Query 647 A-CTTCGAAGAGGTAGCAACTTTGTTGGAGTGCTTAT-TCACATCGGATACTCCATTGAC 704 | || |||||||||| | |||||| ||||||| || | | |||||||||| ||||||||| Sbjct 688 ATCT-CGAAGAGGTACCGACTTTGCTGGAGTGTTTGTCT-ACATCGGATAATCCATTGAC 745 Query 705 CGATACATTTCTGAAAAAGAAAAGCTCATATGGCATGAAGAGAATTCACAAACCGCTGAG 764 |||||||||||||||||||||||| |||||| | | ||||| ||||| ||| || ||| Sbjct 746 CGATACATTTCTGAAAAAGAAAAGTTCATATAGTACAAAGAGGATTCAGAAATTGCCGAG 805 Query 765 TCCTGCCCTCCGTGAAGAAAGAGAGGAATCAAAAGCTGATCAAACGATTACGCTAAATGC 824 ||||| |||| ||||||| ||||||||||||| | |||| ||||||||||| ||||||| Sbjct 806 TCCTGGCCTCTGTGAAGATAGAGAGGAATCAACACCTGACCAAACGATTACACTAAATG- 864 Query 825 CTATGTTAGGAAGAAGGAAGGGAACATTCTGTTTGTTGAATGTGGCGAAGATTTTGTTGA 884 | ||| | ||||||||||| ||||||||||||||||||||||| || || |||||||| Sbjct 865 -T-TGT-A--AAGAAGGAAGGAAACATTCTGTTTGTTGAATGTGGTGATGACTTTGTTGA 919 Query 885 TCTTCTCTTTACTTTTCTTGCTATGCCTCTAGAATCTGTATGGGGAATAGCTGGCAATGG 944 ||||||||| |||||||||||||| ||||||||||||| |||||||||||||||| |||| Sbjct 920 TCTTCTCTTCACTTTTCTTGCTATACCTCTAGAATCTGCATGGGGAATAGCTGGCGATGG 979 Query 945 AATCATCTTTGGATGCATTGGAAACTTGTGCAGAAGCTTTAAGGATTTAAGTATTGTTTC 1004 ||||||| |||||||||||||||||||| ||| |||||||||||| |||||| ||| | | Sbjct 980 AATCATCATTGGATGCATTGGAAACTTGAGCAAAAGCTTTAAGGACTTAAGTGTTGATCC 1039 Query 1005 TAGTA-GAGAAGCTAAATGTGTACTTCCTCACTACTACAAGTGTCATAAGCAGCTTCTTG 1063 | | |||||||||||||||| |||||||| |||||||||||||| |||||||| |||| Sbjct 1040 CGG-ACGAGAAGCTAAATGTGTTCTTCCTCATTACTACAAGTGTCAGAAGCAGCTACTTG 1098 Query 1064 ATGTTGTCAC-ACCCCATGAGCCACCAACTTACTACA-GTTATGTTTCCTTC-TC-CGTG 1119 ||| |||||| |||| || ||||||| |||| |||| || |||| |||| | | | | Sbjct 1099 ATGCTGTCACCACCC-ATAAGCCACCGACTTTCTACTTGT-ATGTGTCCTCCATGGCTTC 1156 Query 1120 GA-TCATTTTAGAGAGTACAATTTGTCTGAAAACTCT-GATAAGCCACTTGTTTATGAGT 1177 || |||| ||||||||||| |||||| ||| |||| | |||||||||||||||| | Sbjct 1157 GAATCATATTAGAGAGTACCGTTTGTCAGAAGACTCCAG-TAAGCCACTTGTTTATTTTT 1215 Query 1178 GGGATAAACTTGTGCCCGTGATTTCGATAGATCCAAAATCTGAAGGT-GATGGTAACACT 1236 ||||| |||| ||||| ||||||||||||||||||||||| ||||| | | ||||||| Sbjct 1216 GGGATGAACTCATGCCCATGATTTCGATAGATCCAAAATCTAAAGGTAG-TACTAACACT 1274 Query 1237 AGTGATGAGTCAACAACATCTAGTGGTGGATTTATGAAGAGAGGGACAAAGTTTATGGTG 1296 | |||||||||||||| | | |||||||| ||||||||||||||||||||||||||| | Sbjct 1275 ACTGATGAGTCAACAATACCCAGTGGTGGCTTTATGAAGAGAGGGACAAAGTTTATGATA 1334 Query 1297 ACAGATGATTTGATCATTACACCTTCAAATTCAACCTCAACCATTGGACTGCTAAAGGAA 1356 ||||||||||||||||| ||||||| ||||||||||||||||||||| || |||| ||| Sbjct 1335 ACAGATGATTTGATCATCACACCTTTGAATTCAACCTCAACCATTGGATTGGTAAAAGAA 1394 Query 1357 AAACAGGTCCGGTTAGACGATGTTGAGATTCAAGTGATCACCATTAGGAAAGAAGAGGCC 1416 |||||| |||| ||||| ||||| ||| |||||| ||||| |||||| |||||||||||| Sbjct 1395 AAACAGATCCGATTAGATGATGTCGAGGTTCAAGAGATCATCATTAGAAAAGAAGAGGCC 1454 Query 1417 ATTAGGTTATTAGAAGCTTCATTGGTGACATTTTCTGCCTTAAGCACTAGTCTTCTAGCT 1476 |||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||| Sbjct 1455 ATTAGGTTATTACAAGCTTCATTGGTGACATGTTCTGCCTTAAGCACTGGTCTTCTAGCT 1514 Query 1477 ATGGAAATT-GCTTCAACAAGTGTTCCTCAAAGC-CGACTTTTTAAGAAGCCAAAGATTG 1534 || ||| | |||||||||||||||||||||||| | | ||| |||||||||||||||| Sbjct 1515 ATAGAA-TCAGCTTCAACAAGTGTTCCTCAAAGCGCAAATTTG-AAGAAGCCAAAGATTG 1572 Query 1535 AGACTTGA 1542 |||||||| Sbjct 1573 AGACTTGA 1580 > AT5G01120.1 | Symbols: | Protein of unknown function (DUF674) | chr5:44813-47127 FORWARD LENGTH=1758 Length=1758 Score = 1386 bits (750), Expect = 0.0 Identities = 1310/1570 (83%), Gaps = 79/1570 (5%) Strand=Plus/Plus Query 1 ATGTCAGATGCTTT-GAAGAATCCGGTGATTAAGTTGAAACTACTCATAGATGAAGAGAA 59 |||||||| | ||| | ||||| ||||||| || ||||| || ||||||||||||||||| Sbjct 85 ATGTCAGACGATTTCG-AGAATTCGGTGATAAACTTGAAGCTGCTCATAGATGAAGAGAA 143 Query 60 AAACAAGGTTGTATTCGCTGAGACGGGTAAAGATTTTGTCGATATACTCTTTAG-TTTTA 118 |||||| ||||||||||||||| |||||| |||||||||||||||||||||||| |||| Sbjct 144 AAACAAAGTTGTATTCGCTGAGGCGGGTACAGATTTTGTCGATATACTCTTTAGCTTTT- 202 Query 119 TGACGTTGCCAATGGGAA-AGATTGTTAGATTGATGGAGATGCATCAGAAGTCACAATCA 177 ||| ||||| ||||||| | |||||||||||| ||||||||||||| ||||||| ||| Sbjct 203 CGACTTTGCCTATGGGAACA-ATTGTTAGATTGCTGGAGATGCATCACAAGTCACGCTCA 261 Query 178 ATATCAATAGGCTGTTTCAACAATATCTATGGAAGTGTTTTGAGTATGGGCATGAAGCAT 237 ||| | || || ||||||||||| ||||||| ||||||| |||||||||| ||||||||| Sbjct 262 ATAGCCATTGGTTGTTTCAACAACATCTATGCAAGTGTTGTGAGTATGGGAATGAAGCAT 321 Query 238 TTCAGGACTGAAGCTTGTAAGCAAATGCTTTTGTATCC-GGGCAGTTTGAATCAGGAGAA 296 ||||| ||| ||||||| |||||||||||||||| ||| ||| |||||||||||||| || Sbjct 322 TTCAGTACTCAAGCTTGCAAGCAAATGCTTTTGTTTCCTGGG-AGTTTGAATCAGGACAA 380 Query 297 ATGTCGAAACCTCAAGAT-AAGGATAGATGATTCTGA-GCGTACAAAGTGTTTCATATGC 354 ||||| ||| | ||| | || |||||||||||| || || ||| ||||||||||| || Sbjct 381 ATGTCAAAATATGAAGCTGAA-GATAGATGATTCCGAGGC-TACCAAGTGTTTCATGTGT 438 Query 355 CCTATGTTTGAGCGAAGCGGGCAATGTTGTAAATGG-TATAGCAATTTTAATACATCGAG 413 |||||||||| ||||||||| ||||| | ||| || |||||||||||||| || || || Sbjct 439 CCTATGTTTGTGCGAAGCGGACAATGCAGCAAA-GGCTATAGCAATTTTAAGACCTCTAG 497 Query 414 ATGTAGCTGTGGGAATTTGATGGATGAAGTGATTCAGTTTCAAGGAGAGGGAGTTGGAGC 473 ||||||||||||||||| |||||||| |||||||||||||||||||| || | | || Sbjct 498 GTGTAGCTGTGGGAATTTCATGGATGAGGTGATTCAGTTTCAAGGAGA---AGGT-G-GC 552 Query 474 TACAGTAGGAAATGGTGCTGAAGGTGGAGTATTTGTGAGGAGTGATCATACTTCATTCGT 533 | | |||||||||| || ||| || ||||||||||||| ||| ||||||||||||| | Sbjct 553 --C-G-AGGAAATGGTTCTCAAGCTGAAGTATTTGTGAGGGGTGCTCATACTTCATTCAT 608 Query 534 AATCACCGATGATTTGAAAGTGGAAGTTAGCTCTGTTGAGTTAACACTTAACGTTCTTAA 593 |||||| ||||||||||||||| |||||| |||||||| || ||| ||||| |||||||| Sbjct 609 AATCACTGATGATTTGAAAGTGCAAGTTAACTCTGTTGGGTCAACGCTTAATGTTCTTAA 668 Query 594 AGATCTTGGCTACACTGATTGTAATAAGTTGGTTGAGATGATT-TACAACTTTAACT-TC 651 |||||||| ||| | ||||| ||||||||||||| |||||| | | | || | || Sbjct 669 AGATCTTGCCTATGCAGATTGCGATAAGTTGGTTGAAATGATTCT-TGAGGTGAA-TCTC 726 Query 652 GAAGAGGTAGCAACTTTGTTGGAGTGCTTATTCACATCGGATACTCCATTGACCGATACA 711 |||||||||| |||||| ||| ||| || |||||||||||||||||||||||||||||| Sbjct 727 CAAGAGGTAGCGACTTTGCTGGTGTGTTTGTTCACATCGGATACTCCATTGACCGATACA 786 Query 712 TTTCTGAAAAAGAAAAGCTCATATGGCATGAAGAGAATTCACAAACCGCTGAGTCCTGCC 771 ||||||||||||||||||||| |||| ||||| || ||||| ||| || ||||||| | Sbjct 787 TTTCTGAAAAAGAAAAGCTCACATGGTATGAACAGGATTCATAAAAGGCCGAGTCCTTCT 846 Query 772 CTCCGTGAAGAAAGAGAGGAATCAAAAGCTGATCAAACGATTACGCTAAATGCCTATGTT 831 ||| ||||||| ||||||||| ||||||||||||||||||| | ||| ||||| |||||| Sbjct 847 CTCAGTGAAGATAGAGAGGAAACAAAAGCTGATCAAACGATAATGCTCAATGCGTATGTT 906 Query 832 AGGAAGAAGGAAGGGAACATTCTGTTTGTTGAATGTGGCGAAGATTTTGTTGATCTTCTC 891 |||||| |||||||||||||||| | |||||||||||| || || |||||||||||||| Sbjct 907 AGGAAGGAGGAAGGGAACATTCTATATGTTGAATGTGGTGACGACTTTGTTGATCTTCT- 965 Query 892 TTTACT-TTTC-TTGCTATGCCTCTAGAATCTGTATGGGGA-ATAGCTGGCA-ATGGAAT 947 ||| || |||| ||||||||||||| ||||||||||||| | || | |||| | ||||| Sbjct 966 TTT-CTCTTTCCTTGCTATGCCTCTGGAATCTGTATGGG-ACATCTCGGGCAGA-GGAAT 1022 Query 948 CATCTTTGGATGCATTGGAAACTTGTGCAGAAGCTTTAAGGATTTAAGTATTGTTTCT-- 1005 |||| |||||||||||||||||||||||| |||||| |||||||| |||| || ||| Sbjct 1023 CATCCTTGGATGCATTGGAAACTTGTGCAAAAGCTTCAAGGATTTGAGTAGTGCTTCCGC 1082 Query 1006 AG-TAGA-GA---AGCT---AAATGTGTACTTCCTCACTACTACAAGTGTCATAAGCAGC 1057 | | || | |||| |||||||| |||||||| ||||||||||| || ||||||| Sbjct 1083 AACT-GAAGCTTCAGCTTTTAAATGTGTTCTTCCTCATTACTACAAGTGCCAGAAGCAGC 1141 Query 1058 TTCT---TGATGTTGTCACACCCCATGAGCCACCAACTTACTACAGTTATGTTTCCTTCT 1114 | || ||||||||||||| ||||| ||||||||||||| ||| ||| ||| || |||| Sbjct 1142 TGCTAAATGATGTTGTCACAACCCATCAGCCACCAACTTATTACCGTTTTGTATCGTTCT 1201 Query 1115 CCGTGGATCATTTTAGAGAGTACAATTTGTCTGAAAACTCTGATAAGCCACTTGTTTATG 1174 | | |||||||||| |||||||| ||||||||||||||||| ||||| |||||| |||| Sbjct 1202 CTGCGGATCATTTTCGAGAGTACCGTTTGTCTGAAAACTCTGGTAAGCGACTTGTGTATG 1261 Query 1175 AGTGGGATAAACTTGTGCCCGTGATTTCGATAGATCC-AAAATCTGAAGGTGATGGTAAC 1233 | ||||||||||| ||||| |||| |||||||||||| |||| | ||||| | ||| Sbjct 1262 ACTGGGATAAACTCGTGCCTGTGACTTCGATAGATCCGAAAACC-GAAGGCAAC---AAC 1317 Query 1234 ACTAGTGATGAGTCAACAACATCTAGTGGTGGATTTATGAAGAGAGGGACAAAGTTTATG 1293 ||| | ||| ||||| |||| |||| ||||||||||||||||||| ||| Sbjct 1318 ACT-GC--TGA---AACAA------GTGG---ATTTGTGAAGAGAGGGACAAAGTTCATG 1362 Query 1294 GTGACAGATGATTTGATCATTACA-CCTTCAAATTCAACCTCAACCATTGGACTGCT-AA 1351 |||||||||||| ||||||||| | ||||| || |||||||||||||||||| | || || Sbjct 1363 GTGACAGATGATCTGATCATTA-ATCCTTCGAACTCAACCTCAACCATTGGATT-CTTAA 1420 Query 1352 AGGAAAAACAGG-TCCGGTTAGACGATGTTGAGATTCAAGTGATCACCATTAGGAAAGAA 1410 |||| |||||| || | |||| || ||||| |||| |||||||| || | |||||| Sbjct 1421 AGGAGAAACAGACTC-GACTAGATGAAGTTGAAATTCGAGTGATCAATATGACAAAAGAA 1479 Query 1411 GAGGCCATTAGGTTATTAGAAGCTTCATTGGTGACATTTTCTGCCTTAAGCACTAGTCTT 1470 |||||||| || ||||| | ||||||| ||||||||| ||||||||||||||| |||| Sbjct 1480 GAGGCCATCAGATTATTGGGAGCTTCAATGGTGACATCCTCTGCCTTAAGCACTGGTCTG 1539 Query 1471 CTAGCTATGGAAATT-GCTTCAACAAGTGTTCCTCAAA-GCCGACTTTTTAAGAAGCCAA 1528 |||||||||||| | ||||||||||||| |||| ||| |||| ||||||||||||| | Sbjct 1540 CTAGCTATGGAA-TCAGCTTCAACAAGTGATCCT-AAATGCCGGTTTTTTAAGAAGCCGA 1597 Query 1529 AGATTGAGAC 1538 |||||||||| Sbjct 1598 AGATTGAGAC 1607 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 76104026220 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5