BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg331073
Length=1542
Score E
Sequences producing significant alignments: (Bits) Value
AT5G43240.1 | Symbols: | Protein of unknown function (DUF674) ... 1637 0.0
AT5G01120.1 | Symbols: | Protein of unknown function (DUF674) ... 1386 0.0
> AT5G43240.1 | Symbols: | Protein of unknown function (DUF674)
| chr5:17352986-17355122 REVERSE LENGTH=1671
Length=1671
Score = 1637 bits (886), Expect = 0.0
Identities = 1350/1568 (86%), Gaps = 55/1568 (4%)
Strand=Plus/Plus
Query 1 ATGTCAGATGCTTTGAAGAATCCGGTGATTAAGTTGAAACTACTCATAGATGAAGAGAAA 60
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 42 ATGTCAGCTACTTTGAAGAATCCGGTGATTAAGTTGAAACTACTCATAGATGAAGAGAAA 101
Query 61 AACAAGGTTGTATTCGCTGAGACGGGTAAAGATTTTGTCGATATACTCTTTAGTTTTATG 120
||||| |||||||| | |||| |||||||||||||||||||| |||||||||||||| |
Sbjct 102 AACAAAGTTGTATTTGTTGAGGCGGGTAAAGATTTTGTCGATTTACTCTTTAGTTTTTTT 161
Query 121 ACGTTGCCAATGGGAAAGATTGTTAGATTGATGGAGATGCATCAGAAGTCACA-ATCAAT 179
|| ||||||||||||| ||||||||||||| |||||||| || |||||||||| | |||
Sbjct 162 ACTTTGCCAATGGGAACGATTGTTAGATTGCTGGAGATGTATAAGAAGTCACAGAA-AAT 220
Query 180 ATCAATAGGCTGTTTCAACAATATCTATGGAAGTGTTTTGAGTATGGGCAT-GAAGCATT 238
| ||||||||||||||| |||||| |||| ||||||| ||||||||||||| || |||||
Sbjct 221 AGCAATAGGCTGTTTCAGCAATATATATGCAAGTGTTGTGAGTATGGGCATTGA-GCATT 279
Query 239 TCAGGACTGAAGCTTGTAAGCAAATGCTTTTGTATCCGGGCAGTTTGAATCAGGAGAAAT 298
|| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 280 TCTTGACTGAAGCTTGTAAGCAAATGCTTTTGTATCCGGGCAGTTTGAATCATGAGAAAT 339
Query 299 GTCGAAACCTCAAGATAAGGATAGATGATTCTGAG-CGTACAAAGTGTTTCATATGCCCT 357
|||||||||| ||| | ||| |||||||||| ||| | ||| |||| |||| | || |||
Sbjct 340 GTCGAAACCTTAAGCTGAGGGTAGATGATTCCGAGGC-TACCAAGTATTTCGTGTGTCCT 398
Query 358 ATGTTTGAGCGAAGCG-G-GCAATGT--TGTAAATGGTATAGCAATTTTAATACATCGAG 413
| ||||| | ||| || | ||||||| || ||| | || |||||||||||||| |||||
Sbjct 399 AAGTTTGTG-GAA-CGTGAGCAATGTACTG-AAA-GTTACAGCAATTTTAATACCTCGAG 454
Query 414 ATGTAGCTGTGG-GAATTTGATGGATGAAGTGATTCAGTTTCAAGGA-GAGGGAGTTGGA 471
|||||||||||| | ||||||| ||||||||| |||| || | ||| |||| || |
Sbjct 455 ATGTAGCTGTGGTGT-TTTGATGAATGAAGTGACTCAGCTTGATGGAAGAGG-AGGCCTA 512
Query 472 GCTACAGT--AGGAAATGGTGCTGAAGGTGGAGTATTTGTGAGGAGTGATCATACTTCAT 529
|| |||| ||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct 513 GC--CAGTGCAGGAAATGGTGTTGAAGGTGGAGTATTTGTTAGGAGTGATCATACTTCAT 570
Query 530 TCGTAATCACCGATGATTTGAAAGTGGAAGTTAGCTCTGTTGAG-TTAACACTTAACGTT 588
|| | ||||| |||||||||||||||||| ||| ||||||| || || |||||||| |||
Sbjct 571 TCATGATCACTGATGATTTGAAAGTGGAAATTACCTCTGTT-AGGTTGACACTTAATGTT 629
Query 589 CTTAAAGATCTTGGCTACACT-GATTGT-AATAAGTTGGTTGAGATGATTTACAACTTTA 646
|||||||||||||||||| | |||||| || ||||||| ||||| |||| | || |||
Sbjct 630 CTTAAAGATCTTGGCTACG-TAGATTGTGAA-AAGTTGGATGAGAAGATTCATGACGTTA 687
Query 647 A-CTTCGAAGAGGTAGCAACTTTGTTGGAGTGCTTAT-TCACATCGGATACTCCATTGAC 704
| || |||||||||| | |||||| ||||||| || | | |||||||||| |||||||||
Sbjct 688 ATCT-CGAAGAGGTACCGACTTTGCTGGAGTGTTTGTCT-ACATCGGATAATCCATTGAC 745
Query 705 CGATACATTTCTGAAAAAGAAAAGCTCATATGGCATGAAGAGAATTCACAAACCGCTGAG 764
|||||||||||||||||||||||| |||||| | | ||||| ||||| ||| || |||
Sbjct 746 CGATACATTTCTGAAAAAGAAAAGTTCATATAGTACAAAGAGGATTCAGAAATTGCCGAG 805
Query 765 TCCTGCCCTCCGTGAAGAAAGAGAGGAATCAAAAGCTGATCAAACGATTACGCTAAATGC 824
||||| |||| ||||||| ||||||||||||| | |||| ||||||||||| |||||||
Sbjct 806 TCCTGGCCTCTGTGAAGATAGAGAGGAATCAACACCTGACCAAACGATTACACTAAATG- 864
Query 825 CTATGTTAGGAAGAAGGAAGGGAACATTCTGTTTGTTGAATGTGGCGAAGATTTTGTTGA 884
| ||| | ||||||||||| ||||||||||||||||||||||| || || ||||||||
Sbjct 865 -T-TGT-A--AAGAAGGAAGGAAACATTCTGTTTGTTGAATGTGGTGATGACTTTGTTGA 919
Query 885 TCTTCTCTTTACTTTTCTTGCTATGCCTCTAGAATCTGTATGGGGAATAGCTGGCAATGG 944
||||||||| |||||||||||||| ||||||||||||| |||||||||||||||| ||||
Sbjct 920 TCTTCTCTTCACTTTTCTTGCTATACCTCTAGAATCTGCATGGGGAATAGCTGGCGATGG 979
Query 945 AATCATCTTTGGATGCATTGGAAACTTGTGCAGAAGCTTTAAGGATTTAAGTATTGTTTC 1004
||||||| |||||||||||||||||||| ||| |||||||||||| |||||| ||| | |
Sbjct 980 AATCATCATTGGATGCATTGGAAACTTGAGCAAAAGCTTTAAGGACTTAAGTGTTGATCC 1039
Query 1005 TAGTA-GAGAAGCTAAATGTGTACTTCCTCACTACTACAAGTGTCATAAGCAGCTTCTTG 1063
| | |||||||||||||||| |||||||| |||||||||||||| |||||||| ||||
Sbjct 1040 CGG-ACGAGAAGCTAAATGTGTTCTTCCTCATTACTACAAGTGTCAGAAGCAGCTACTTG 1098
Query 1064 ATGTTGTCAC-ACCCCATGAGCCACCAACTTACTACA-GTTATGTTTCCTTC-TC-CGTG 1119
||| |||||| |||| || ||||||| |||| |||| || |||| |||| | | | |
Sbjct 1099 ATGCTGTCACCACCC-ATAAGCCACCGACTTTCTACTTGT-ATGTGTCCTCCATGGCTTC 1156
Query 1120 GA-TCATTTTAGAGAGTACAATTTGTCTGAAAACTCT-GATAAGCCACTTGTTTATGAGT 1177
|| |||| ||||||||||| |||||| ||| |||| | |||||||||||||||| |
Sbjct 1157 GAATCATATTAGAGAGTACCGTTTGTCAGAAGACTCCAG-TAAGCCACTTGTTTATTTTT 1215
Query 1178 GGGATAAACTTGTGCCCGTGATTTCGATAGATCCAAAATCTGAAGGT-GATGGTAACACT 1236
||||| |||| ||||| ||||||||||||||||||||||| ||||| | | |||||||
Sbjct 1216 GGGATGAACTCATGCCCATGATTTCGATAGATCCAAAATCTAAAGGTAG-TACTAACACT 1274
Query 1237 AGTGATGAGTCAACAACATCTAGTGGTGGATTTATGAAGAGAGGGACAAAGTTTATGGTG 1296
| |||||||||||||| | | |||||||| ||||||||||||||||||||||||||| |
Sbjct 1275 ACTGATGAGTCAACAATACCCAGTGGTGGCTTTATGAAGAGAGGGACAAAGTTTATGATA 1334
Query 1297 ACAGATGATTTGATCATTACACCTTCAAATTCAACCTCAACCATTGGACTGCTAAAGGAA 1356
||||||||||||||||| ||||||| ||||||||||||||||||||| || |||| |||
Sbjct 1335 ACAGATGATTTGATCATCACACCTTTGAATTCAACCTCAACCATTGGATTGGTAAAAGAA 1394
Query 1357 AAACAGGTCCGGTTAGACGATGTTGAGATTCAAGTGATCACCATTAGGAAAGAAGAGGCC 1416
|||||| |||| ||||| ||||| ||| |||||| ||||| |||||| ||||||||||||
Sbjct 1395 AAACAGATCCGATTAGATGATGTCGAGGTTCAAGAGATCATCATTAGAAAAGAAGAGGCC 1454
Query 1417 ATTAGGTTATTAGAAGCTTCATTGGTGACATTTTCTGCCTTAAGCACTAGTCTTCTAGCT 1476
|||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct 1455 ATTAGGTTATTACAAGCTTCATTGGTGACATGTTCTGCCTTAAGCACTGGTCTTCTAGCT 1514
Query 1477 ATGGAAATT-GCTTCAACAAGTGTTCCTCAAAGC-CGACTTTTTAAGAAGCCAAAGATTG 1534
|| ||| | |||||||||||||||||||||||| | | ||| ||||||||||||||||
Sbjct 1515 ATAGAA-TCAGCTTCAACAAGTGTTCCTCAAAGCGCAAATTTG-AAGAAGCCAAAGATTG 1572
Query 1535 AGACTTGA 1542
||||||||
Sbjct 1573 AGACTTGA 1580
> AT5G01120.1 | Symbols: | Protein of unknown function (DUF674)
| chr5:44813-47127 FORWARD LENGTH=1758
Length=1758
Score = 1386 bits (750), Expect = 0.0
Identities = 1310/1570 (83%), Gaps = 79/1570 (5%)
Strand=Plus/Plus
Query 1 ATGTCAGATGCTTT-GAAGAATCCGGTGATTAAGTTGAAACTACTCATAGATGAAGAGAA 59
|||||||| | ||| | ||||| ||||||| || ||||| || |||||||||||||||||
Sbjct 85 ATGTCAGACGATTTCG-AGAATTCGGTGATAAACTTGAAGCTGCTCATAGATGAAGAGAA 143
Query 60 AAACAAGGTTGTATTCGCTGAGACGGGTAAAGATTTTGTCGATATACTCTTTAG-TTTTA 118
|||||| ||||||||||||||| |||||| |||||||||||||||||||||||| ||||
Sbjct 144 AAACAAAGTTGTATTCGCTGAGGCGGGTACAGATTTTGTCGATATACTCTTTAGCTTTT- 202
Query 119 TGACGTTGCCAATGGGAA-AGATTGTTAGATTGATGGAGATGCATCAGAAGTCACAATCA 177
||| ||||| ||||||| | |||||||||||| ||||||||||||| ||||||| |||
Sbjct 203 CGACTTTGCCTATGGGAACA-ATTGTTAGATTGCTGGAGATGCATCACAAGTCACGCTCA 261
Query 178 ATATCAATAGGCTGTTTCAACAATATCTATGGAAGTGTTTTGAGTATGGGCATGAAGCAT 237
||| | || || ||||||||||| ||||||| ||||||| |||||||||| |||||||||
Sbjct 262 ATAGCCATTGGTTGTTTCAACAACATCTATGCAAGTGTTGTGAGTATGGGAATGAAGCAT 321
Query 238 TTCAGGACTGAAGCTTGTAAGCAAATGCTTTTGTATCC-GGGCAGTTTGAATCAGGAGAA 296
||||| ||| ||||||| |||||||||||||||| ||| ||| |||||||||||||| ||
Sbjct 322 TTCAGTACTCAAGCTTGCAAGCAAATGCTTTTGTTTCCTGGG-AGTTTGAATCAGGACAA 380
Query 297 ATGTCGAAACCTCAAGAT-AAGGATAGATGATTCTGA-GCGTACAAAGTGTTTCATATGC 354
||||| ||| | ||| | || |||||||||||| || || ||| ||||||||||| ||
Sbjct 381 ATGTCAAAATATGAAGCTGAA-GATAGATGATTCCGAGGC-TACCAAGTGTTTCATGTGT 438
Query 355 CCTATGTTTGAGCGAAGCGGGCAATGTTGTAAATGG-TATAGCAATTTTAATACATCGAG 413
|||||||||| ||||||||| ||||| | ||| || |||||||||||||| || || ||
Sbjct 439 CCTATGTTTGTGCGAAGCGGACAATGCAGCAAA-GGCTATAGCAATTTTAAGACCTCTAG 497
Query 414 ATGTAGCTGTGGGAATTTGATGGATGAAGTGATTCAGTTTCAAGGAGAGGGAGTTGGAGC 473
||||||||||||||||| |||||||| |||||||||||||||||||| || | | ||
Sbjct 498 GTGTAGCTGTGGGAATTTCATGGATGAGGTGATTCAGTTTCAAGGAGA---AGGT-G-GC 552
Query 474 TACAGTAGGAAATGGTGCTGAAGGTGGAGTATTTGTGAGGAGTGATCATACTTCATTCGT 533
| | |||||||||| || ||| || ||||||||||||| ||| ||||||||||||| |
Sbjct 553 --C-G-AGGAAATGGTTCTCAAGCTGAAGTATTTGTGAGGGGTGCTCATACTTCATTCAT 608
Query 534 AATCACCGATGATTTGAAAGTGGAAGTTAGCTCTGTTGAGTTAACACTTAACGTTCTTAA 593
|||||| ||||||||||||||| |||||| |||||||| || ||| ||||| ||||||||
Sbjct 609 AATCACTGATGATTTGAAAGTGCAAGTTAACTCTGTTGGGTCAACGCTTAATGTTCTTAA 668
Query 594 AGATCTTGGCTACACTGATTGTAATAAGTTGGTTGAGATGATT-TACAACTTTAACT-TC 651
|||||||| ||| | ||||| ||||||||||||| |||||| | | | || | ||
Sbjct 669 AGATCTTGCCTATGCAGATTGCGATAAGTTGGTTGAAATGATTCT-TGAGGTGAA-TCTC 726
Query 652 GAAGAGGTAGCAACTTTGTTGGAGTGCTTATTCACATCGGATACTCCATTGACCGATACA 711
|||||||||| |||||| ||| ||| || ||||||||||||||||||||||||||||||
Sbjct 727 CAAGAGGTAGCGACTTTGCTGGTGTGTTTGTTCACATCGGATACTCCATTGACCGATACA 786
Query 712 TTTCTGAAAAAGAAAAGCTCATATGGCATGAAGAGAATTCACAAACCGCTGAGTCCTGCC 771
||||||||||||||||||||| |||| ||||| || ||||| ||| || ||||||| |
Sbjct 787 TTTCTGAAAAAGAAAAGCTCACATGGTATGAACAGGATTCATAAAAGGCCGAGTCCTTCT 846
Query 772 CTCCGTGAAGAAAGAGAGGAATCAAAAGCTGATCAAACGATTACGCTAAATGCCTATGTT 831
||| ||||||| ||||||||| ||||||||||||||||||| | ||| ||||| ||||||
Sbjct 847 CTCAGTGAAGATAGAGAGGAAACAAAAGCTGATCAAACGATAATGCTCAATGCGTATGTT 906
Query 832 AGGAAGAAGGAAGGGAACATTCTGTTTGTTGAATGTGGCGAAGATTTTGTTGATCTTCTC 891
|||||| |||||||||||||||| | |||||||||||| || || ||||||||||||||
Sbjct 907 AGGAAGGAGGAAGGGAACATTCTATATGTTGAATGTGGTGACGACTTTGTTGATCTTCT- 965
Query 892 TTTACT-TTTC-TTGCTATGCCTCTAGAATCTGTATGGGGA-ATAGCTGGCA-ATGGAAT 947
||| || |||| ||||||||||||| ||||||||||||| | || | |||| | |||||
Sbjct 966 TTT-CTCTTTCCTTGCTATGCCTCTGGAATCTGTATGGG-ACATCTCGGGCAGA-GGAAT 1022
Query 948 CATCTTTGGATGCATTGGAAACTTGTGCAGAAGCTTTAAGGATTTAAGTATTGTTTCT-- 1005
|||| |||||||||||||||||||||||| |||||| |||||||| |||| || |||
Sbjct 1023 CATCCTTGGATGCATTGGAAACTTGTGCAAAAGCTTCAAGGATTTGAGTAGTGCTTCCGC 1082
Query 1006 AG-TAGA-GA---AGCT---AAATGTGTACTTCCTCACTACTACAAGTGTCATAAGCAGC 1057
| | || | |||| |||||||| |||||||| ||||||||||| || |||||||
Sbjct 1083 AACT-GAAGCTTCAGCTTTTAAATGTGTTCTTCCTCATTACTACAAGTGCCAGAAGCAGC 1141
Query 1058 TTCT---TGATGTTGTCACACCCCATGAGCCACCAACTTACTACAGTTATGTTTCCTTCT 1114
| || ||||||||||||| ||||| ||||||||||||| ||| ||| ||| || ||||
Sbjct 1142 TGCTAAATGATGTTGTCACAACCCATCAGCCACCAACTTATTACCGTTTTGTATCGTTCT 1201
Query 1115 CCGTGGATCATTTTAGAGAGTACAATTTGTCTGAAAACTCTGATAAGCCACTTGTTTATG 1174
| | |||||||||| |||||||| ||||||||||||||||| ||||| |||||| ||||
Sbjct 1202 CTGCGGATCATTTTCGAGAGTACCGTTTGTCTGAAAACTCTGGTAAGCGACTTGTGTATG 1261
Query 1175 AGTGGGATAAACTTGTGCCCGTGATTTCGATAGATCC-AAAATCTGAAGGTGATGGTAAC 1233
| ||||||||||| ||||| |||| |||||||||||| |||| | ||||| | |||
Sbjct 1262 ACTGGGATAAACTCGTGCCTGTGACTTCGATAGATCCGAAAACC-GAAGGCAAC---AAC 1317
Query 1234 ACTAGTGATGAGTCAACAACATCTAGTGGTGGATTTATGAAGAGAGGGACAAAGTTTATG 1293
||| | ||| ||||| |||| |||| ||||||||||||||||||| |||
Sbjct 1318 ACT-GC--TGA---AACAA------GTGG---ATTTGTGAAGAGAGGGACAAAGTTCATG 1362
Query 1294 GTGACAGATGATTTGATCATTACA-CCTTCAAATTCAACCTCAACCATTGGACTGCT-AA 1351
|||||||||||| ||||||||| | ||||| || |||||||||||||||||| | || ||
Sbjct 1363 GTGACAGATGATCTGATCATTA-ATCCTTCGAACTCAACCTCAACCATTGGATT-CTTAA 1420
Query 1352 AGGAAAAACAGG-TCCGGTTAGACGATGTTGAGATTCAAGTGATCACCATTAGGAAAGAA 1410
|||| |||||| || | |||| || ||||| |||| |||||||| || | ||||||
Sbjct 1421 AGGAGAAACAGACTC-GACTAGATGAAGTTGAAATTCGAGTGATCAATATGACAAAAGAA 1479
Query 1411 GAGGCCATTAGGTTATTAGAAGCTTCATTGGTGACATTTTCTGCCTTAAGCACTAGTCTT 1470
|||||||| || ||||| | ||||||| ||||||||| ||||||||||||||| ||||
Sbjct 1480 GAGGCCATCAGATTATTGGGAGCTTCAATGGTGACATCCTCTGCCTTAAGCACTGGTCTG 1539
Query 1471 CTAGCTATGGAAATT-GCTTCAACAAGTGTTCCTCAAA-GCCGACTTTTTAAGAAGCCAA 1528
|||||||||||| | ||||||||||||| |||| ||| |||| ||||||||||||| |
Sbjct 1540 CTAGCTATGGAA-TCAGCTTCAACAAGTGATCCT-AAATGCCGGTTTTTTAAGAAGCCGA 1597
Query 1529 AGATTGAGAC 1538
||||||||||
Sbjct 1598 AGATTGAGAC 1607
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 76104026220
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5