BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg331076 Length=696 Score E Sequences producing significant alignments: (Bits) Value AT2G27490.1 | Symbols: ATCOAE | dephospho-CoA kinase family | c... 446 2e-124 > AT2G27490.1 | Symbols: ATCOAE | dephospho-CoA kinase family | chr2:11748015-11750182 REVERSE LENGTH=1061 Length=1061 Score = 446 bits (241), Expect = 2e-124 Identities = 263/274 (96%), Gaps = 0/274 (0%) Strand=Plus/Plus Query 423 ACTGATGGAGAGAGATGGATTGAGTGAGGAAGATGCAAGAAATAGAGTGATGGCTCAGAT 482 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 716 ACTGATGGAGAGAGATGGATTGAGTGAGGAAGATGCAAGAAACAGAGTGATGGCTCAGAT 775 Query 483 GCTTTTGGATTCGAAAAGAAGCAAAGCTGATGTTGTGATCGATAATAATGGCTCTCTCGA 542 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 776 GCCGTTGGATTCGAAAAGAAGCAAAGCTGATGTTGTGATCGATAATAATGGCTCTCTTGA 835 Query 543 CGACCTCCACCAACAGTTCGACAATGTTTTGTTTGAAATTAGAAAACCCTTGACGTGGAT 602 |||||| |||||||||||||| || |||||| |||||||||||| ||| ||||||||||| Sbjct 836 CGACCTTCACCAACAGTTCGAGAAGGTTTTGATTGAAATTAGAAGACCATTGACGTGGAT 895 Query 603 CGAGTTTTGGCGTTCAAGGCAAGGAGCCTTCTCGGTCCTTGGTTCGGTGATTTTAGGATT 662 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 896 CGAGTTTTGGCGTTCAAGGCAAGGAGCCTTCTCGGTCCTTGGTTCAGTGATTTTAGGATT 955 Query 663 ATCTGTTTGCAAACAGCTCAAAATTGGCTCTTAA 696 |||||||||||||||||||||||||||||||||| Sbjct 956 ATCTGTTTGCAAACAGCTCAAAATTGGCTCTTAA 989 Score = 390 bits (211), Expect = 8e-108 Identities = 237/250 (95%), Gaps = 0/250 (0%) Strand=Plus/Plus Query 1 ATGAGAATAGTCGGGCTAACGGGAGGCATATCGTCTGGGAAGAGTACAGTCTCCAACCTC 60 ||||||||||||||| |||||||||||||| ||||||||||||||||||| || |||||| Sbjct 291 ATGAGAATAGTCGGGTTAACGGGAGGCATAGCGTCTGGGAAGAGTACAGTGTCTAACCTC 350 Query 61 TTCAAGGCTAGTGGCATTCCCGTTGTTGACGCTGATGTTGTTGCTCGAGATGTATTGAAG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 351 TTCAAGGCTAGTGGCATTCCCGTTGTTGACGCTGATGTTGTTGCTCGAGATGTATTGAAG 410 Query 121 AAAGGAAGCAGTGGATGGAAAAGAGTAGTTGCAGCTTTCGGGGAGGAGATTCTGCTTCCT 180 ||||||||| |||||||||||||||| ||||||||||| || |||||||||||||||||| Sbjct 411 AAAGGAAGCGGTGGATGGAAAAGAGTCGTTGCAGCTTTTGGTGAGGAGATTCTGCTTCCT 470 Query 181 AGTAGAGAAGTGGATCGGCCGAAACTCGGTCAGATTGTGTTCTCATCTGATTCCAAACGC 240 ||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||| || Sbjct 471 AGTGGAGAAGTGGATCGGCCAAAACTCGGTCAGATTGTGTTCTCGTCTGATTCCAAGCGT 530 Query 241 CAACTTCTAA 250 |||||||||| Sbjct 531 CAACTTCTAA 540 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 33707112637 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5