BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg331112 Length=2280 Score E Sequences producing significant alignments: (Bits) Value AT5G42880.1 | Symbols: | Plant protein of unknown function (DU... 3197 0.0 > AT5G42880.1 | Symbols: | Plant protein of unknown function (DUF827) | chr5:17191577-17194131 FORWARD LENGTH=2364 Length=2364 Score = 3197 bits (1731), Expect = 0.0 Identities = 2105/2284 (92%), Gaps = 32/2284 (1%) Strand=Plus/Plus Query 1 ATGTTGGGCGATGACAAAGATTCAGACGACCTTAATTTATTTCTCAATGCCATTGGTGAA 60 |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct 69 ATGTTGGGCGATGATAAAGATTCAGACGACCTTAATTTATTTCTCAACGCCATTGGTGAA 128 Query 61 ACTGGAGATGAACAAGGTCCAACGAGAATCTCCACGTCTTTCAATGATATAGACTTCTTG 120 |||| |||| || | || | | || | |||||||||||||| || ||||||||| Sbjct 129 GCTGGTGATG---AA-G---AA-G-G--TC-CAACGTCTTTCAATGACATCGACTTCTTG 176 Query 121 ACATTCGACGATGATGATTTACATAATCCATTTCAAGATTGTGATTCAAGTCCAATCAAC 180 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||| Sbjct 177 ACATTCGACGATGAAGATTTACATAATCCATTTCAAGATTGTGAGACAAGTCCTATCAAC 236 Query 181 GAACCTTCTAGGGTTTATGTTGCACCAAGGGTGATGATAAGTCATCAAGATTCGTTTTCT 240 |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 237 GAACCTCCTAAGGTTTATGTTGCACCAAGGGTGATGATAAGTCATCAAGATTCGTTTTCT 296 Query 241 GAAGATTCAAGAATCGATGTTATTGAAGATGCTAGGATTTTGCCTGCTTCCCCTCGTCTT 300 ||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct 297 GAAGATTCAAGAACCGATGTTATCGAAGATGCTAGGATTTTGCCTGCTTCTCCTCGTCTT 356 Query 301 AGAGTTCCTGCTTCTCCTCGAGCTTTTGTGTATCCAAGATCTGTTGAATCGCCTCGTTTC 360 ||||||||||||||||||||||| ||||||||||| |||||||| ||||| |||||||| Sbjct 357 AGAGTTCCTGCTTCTCCTCGAGCATTTGTGTATCCGAGATCTGTCGAATCACCTCGTTTT 416 Query 361 GGTTCTCCGAGATCTGTCGAATCACCTAGTTTCGGGTCTCCTATTGGTGTTATCGATACA 420 ||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||| Sbjct 417 GGTTCTCCGAGATCTGTCGAATCGCCTTGTTTCGGGTCTCCGATTGGTGTTATCGATACA 476 Query 421 GCTTCGCCTTTCGAATCGGTTAAAGAAGCAGTTTCTAAGTTTGGTGGGATCACAGATTGG 480 ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 477 GCTTCACCTTTCGAATCGGTTAGAGAAGCAGTTTCTAAGTTTGGTGGGATCACAGATTGG 536 Query 481 AAAGCTCATAAGATTCAGACAATAGAGAGACGGAAGATGGTAGATGAAGAGCTTGAGAAG 540 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 537 AAAGCTCATAAGATTCAGACTATAGAGAGACGGAAGATGGTAGATGAAGAGCTTGAGAAG 596 Query 541 ATACAAGAAGCAATGCCTGAGTTCAAGAGAGAAGCTGAGTTAGCTGAAGAGGCGAAACAC 600 |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| || Sbjct 597 ATACAAGAAGCAATGCCTGAGTACAAGAGAGAAGCTGAGTTAGCTGAAGAAGCGAAATAC 656 Query 601 GATGCGTTGAAGGAGCTAGAGAACACAAAGGGACTGATTGAGGAGCTAAAACTCGAGTTG 660 ||||||||| ||||| ||||||||||||||||||| || |||||||| ||||| || ||| Sbjct 657 GATGCGTTGGAGGAGTTAGAGAACACAAAGGGACTCATCGAGGAGCTGAAACTAGAATTG 716 Query 661 GAGAAAGCAGAAAAGGAAGAGCAACAGGCGAAACAGGACTCGGATCTTGCGCAGATGCGT 720 |||||||| ||||||||||||||||| ||||||||||| || || || |||||||||||| Sbjct 717 GAGAAAGCGGAAAAGGAAGAGCAACAAGCGAAACAGGATTCAGAGCTGGCGCAGATGCGT 776 Query 721 GTGGAAGAGATGGCGAGAGGTGTAGCTAATGAGGCAAGTGTTGCTGTTAAAGCACAGCTC 780 || || ||||||| || |||||||||||||||||||||||||||||||||| |||||||| Sbjct 777 GTTGAGGAGATGGAGAAAGGTGTAGCTAATGAGGCAAGTGTTGCTGTTAAAACACAGCTC 836 Query 781 GAGGTAGCGAAAGCGAGGCAAGTCTCGGCTACTTGTGAGCTACGGTCTGTGAGAGAAGAG 840 |||||||| ||||||||||||||||||||||||| |||| |||||||||| ||||||||| Sbjct 837 GAGGTAGCTAAAGCGAGGCAAGTCTCGGCTACTTCTGAGTTACGGTCTGTTAGAGAAGAG 896 Query 841 ATTGAAATGGTTAGTAATGAATATGAAGATATGTTGAGGGAAAAAGAATTAGCT-AAGGA 899 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| | || Sbjct 897 ATTGAAATGGTTAGTAATGAATATAAAGATATGTTGAGGGAAAAAGAATTAGCTGCA-GA 955 Query 900 GAGAGCTGATATTGCTGTTATGGAAGCTAAAGAGATTGAGAGAACAATGGATGGTTTGAG 959 ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| Sbjct 956 GAGAGCTGATATTGCTGTTTTGGAAGCTAAAGAGATTGAGAGAACGATGGATGGTTTGAG 1015 Query 960 TATAGAGCTGATTGCCACCAAGGAGTTGTTGGAATCTGTGCACACGGCTCATCTCGAAGC 1019 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1016 TATAGAGCTGATTGCCACCAAGGAGTTGTTGGAATCTGTGCACACGGCTCATCTCGAAGC 1075 Query 1020 GGAAGAGAAGAGATTCAGTGTGGCAATGGCTCGGGACCAAGATGTTTACAACTGGGAAAA 1079 ||||||||||||||||||||| ||||||||| |||||||||||||||| || |||||||| Sbjct 1076 GGAAGAGAAGAGATTCAGTGTAGCAATGGCTAGGGACCAAGATGTTTATAATTGGGAAAA 1135 Query 1080 GGAATTGAAGATGGTGGAAAATGATATCGAGAGGCTTAACCAAGAAGTTCGTGCGGCTGG 1139 ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||| Sbjct 1136 GGAATTGAAGATGGTCGAAAATGATATTGAGAGGCTTAACCAAGAGGTTCGTGCGGCTGA 1195 Query 1140 TGATGTGAAAACAAAGCTAGATACTGCTTCTGCTCTTCAGCATGATTTGAAGGCTGAATT 1199 |||||||||| | |||||||| |||||||||||||||||||||||||||||| | ||||| Sbjct 1196 TGATGTGAAAGCTAAGCTAGAGACTGCTTCTGCTCTTCAGCATGATTTGAAGACCGAATT 1255 Query 1200 AGCGGCTTTCACAGAAA-ATGCAAGCGGTGATCTGTTGACGGAAAAGAAGAGTAATAATG 1258 |||||||||||| || | || |||||||| |||||||| ||||||||| | | Sbjct 1256 AGCGGCTTTCACGGATATAT-CAAGCGGTAATCTGTTGTTGGAAAAGAA---T------G 1305 Query 1259 ACATACATGCGGCTGTTGATTCTGCGAGAAGAGAGCTTGAAGAAGTCAAAGCCAACATTG 1318 |||| ||||| || ||||| |||||||| ||||| || |||||||| ||||||||||| | Sbjct 1306 ACATTCATGCTGCGGTTGAGTCTGCGAGGAGAGAACTCGAAGAAGTAAAAGCCAACATAG 1365 Query 1319 AAAAAGCAGCTTCAGAGGTGAAAACATTGAAGATAATTGCTGGATCATTACAGTCCGAGC 1378 | |||||||||||||||||||||| |||||||||||| ||||| ||||||||||| |||| Sbjct 1366 AGAAAGCAGCTTCAGAGGTGAAAAAATTGAAGATAATAGCTGGTTCATTACAGTCTGAGC 1425 Query 1379 TTGGAAGAGAGAGACAGGATCTAGCAGAAACTAAGCAGAGAGGAACTGTGGGTTCGGTTC 1438 |||||||||||||||||||||||| |||||||||||| | || || | ||||| || | Sbjct 1426 TTGGAAGAGAGAGACAGGATCTAGAAGAAACTAAGCAAAAAGAAAGTACGGGTTTGGCCC 1485 Query 1439 AGACAAAGGGTAAAGAATCAAGAGAGGAGTTAGAGGATACAGCAAAGAAGTTGGAGCAGG 1498 |||||| | |||||| || |||||||||| | || ||||| |||||||||||||||| Sbjct 1486 GGACAAACGATAAAGACGCAGGAGAGGAGTTGGTTGAAACAGCCAAGAAGTTGGAGCAGG 1545 Query 1499 CGACGAAAGAGGCAGAGGATGCAAAGGCATTTGCTACAGCTGCTAGAGACGAGCTTCGAA 1558 ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||| Sbjct 1546 CGACGAAAGAGGCAGAGGATGCAAAGGCATTGGCTACAGCTTCTAGAGACGAGCTTAGAA 1605 Query 1559 TGGCGAAGGAATTGTCTGAGCAAGCGAAAAGAGGAATGTCTACGATAGAGAGTAGGTTAA 1618 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1606 TGGCGAAGGAATTGTCTGAGCAAGCGAAAAGAGGAATGTCTACGATAGAGAGTCGGTTAG 1665 Query 1619 CT-GAGGCGAAAAAGGAAATGGAGGCTGCTAGGGCTTCAGAGAAGTTAGCCTTGGCTGCT 1677 | ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct 1666 -TAGAGGCGAAAAAGGAAATGGAGGCTGCTCGGGCGTCAGAGAAGTTAGCCTTGGCTGCT 1724 Query 1678 ATAAAAGCTTTACAAGAGACTGAATCTTCTCAGAGATTCGAGGAGATTAATAATTCACCA 1737 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1725 ATAAAAGCTCTGCAAGAGACTGAATCTTCTCAGAGATTCGAGGAGATTAATAATTCACCA 1784 Query 1738 AGAAGCATCATAATCTCTGTAGAGGAATACTACGAGCTAAGCAAGCAGGCACACGAGTCC 1797 |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1785 AGAAGCATTATAATCTCTGTAGAGGAATACTACGAGCTAAGCAAGCAGGCACTCGAGTCT 1844 Query 1798 GAGGAGGAGGCAAACACAAGACTATCAGAGATTGTCTCCCAAATAGAGGTGGCTAAAGAG 1857 |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct 1845 GAGGAGGAGGCAAACACAAGACTATCAGAGATTGTCTCTCAAATAGAGGTGGCGAAAGAG 1904 Query 1858 GAAGAGTCAAGAATCTTGGAGAAACTAGAGGAAGTGAATAGGGAAATGAGCCTAAGAAAA 1917 ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct 1905 GAAGAGTCAAGAATCTTGGAGAAACTAGAGGAAGTGAATAGAGAAATGAGTGTAAGAAAA 1964 Query 1918 GAAGAGCTTAAAGAGGCTAATGGAAAAGCCGAGAATGCTAGAGACGGGAAGTTGGGTATG 1977 | |||||||||||||||||||||||||||||| || |||||||| ||||||||||| ||| Sbjct 1965 GCAGAGCTTAAAGAGGCTAATGGAAAAGCCGAAAAGGCTAGAGATGGGAAGTTGGGAATG 2024 Query 1978 GAGCAAGAGTTAAGAAAATGGAGATCAGAAAATGGGAAAAGGAGAACAGACGAAAGCAGG 2037 ||||||||| | ||||||||||| || ||||||||||| ||||||||||||||| |||| Sbjct 2025 GAGCAAGAGCTGAGAAAATGGAGGTCGGAAAATGGGAAGAGGAGAACAGACGAAGGCAGA 2084 Query 2038 GAGCCTAAGAAAAGTCCGACGAGGTCAAGCACCGAGGGGAGAAATAAGGAGAACGGACTT 2097 |||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||| || Sbjct 2085 GAGCCTGAGAAAAGTCCGACGAGGTCAAGCACCGAGGGGAGAAACAAGGAGAATGGA-TT 2143 Query 2098 -GGGCAGTCAAAATCGTTTGCATTTGGTGATCAAGGAAGCAGCAGCAACTACACTGGAGG 2156 |||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct 2144 CGGGCAGTCGAAATCGTTTGCATTTGGTGAACAAGGAAGCAGCAGCAACAACACTGGAGG 2203 Query 2157 AGGTACTACTACTACTACCAATAATAATCTGACTCCTGAAACAaagaagaagaagaagaa 2216 | |||||||||||| || | ||||||||||||||||||||||||||||||||||||||| Sbjct 2204 AAGTACTACTACTAATA--A-TAATAATCTGACTCCTGAAACAAAGAAGAAGAAGAAGAA 2260 Query 2217 gCTTTCTTTGTTTCCAAAAGTTTTCATGTTCTTGTCAAGAAAGAAGTCTCACAGTCGCAA 2276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 2261 GCTTTCTTTGTTTCCAAAAGTTTTCATGTTCTTGTCAAGAAAGAAGTCTCACAGTCACAA 2320 Query 2277 GTGA 2280 |||| Sbjct 2321 GTGA 2324 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 113152028430 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5