BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg331130 Length=636 Score E Sequences producing significant alignments: (Bits) Value AT5G42700.1 | Symbols: | AP2/B3-like transcriptional factor fa... 915 0.0 > AT5G42700.1 | Symbols: | AP2/B3-like transcriptional factor family protein | chr5:17122171-17124353 FORWARD LENGTH=812 Length=812 Score = 915 bits (495), Expect = 0.0 Identities = 593/640 (93%), Gaps = 8/640 (1%) Strand=Plus/Plus Query 1 ATGGTGGTCTCAAAGCAATCAAAATACGAAGAATTTCGTTTGAAAAGAGTGGAAGAGAAC 60 ||||||||| ||| ||| |||| |||||||||||||||||||||||||||||||||||| Sbjct 1 ATGGTGGTCGAAAAACAAACAAAGTACGAAGAATTTCGTTTGAAAAGAGTGGAAGAGAAC 60 Query 61 AAGAAACGAATGGAAGCTCTCAATCTTCAAAAACTCTCTCAAAATCTCAATTCCACTTCC 120 |||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||| Sbjct 61 AAGAAACGAATGGAAGCTCTGAATCTTCCAAAACTCTCTCAAATTCTCAATTCCACTTCC 120 Query 121 GTCAAAAATTCTCCGATGAAGAAGAGATCTATTCCTCGAACACCAGAGAAGCAGATGGTT 180 ||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 121 GTCAAGATTTCTCCGATGAAGAAGAGATCTATTCCTCGAACACCAGAGAAGAAGATGGTT 180 Query 181 GATG-TACAACGAATTCAGATACGGAGAAGGGG-GTTGAGTAA-AAGGAGAGATTTGTCG 237 |||| || ||||| | || |||| ||||||||| | || | || || ||||||||| | | Sbjct 181 GATGTTA-AACGAGTGCACATACAGAGAAGGGGAG-TGGGCAAGAA-GAGAGATTTATTG 237 Query 238 AATCGAGTTTATGTTTCTGAAGAAATCAGAGAAGAGG-CATTTTCAAGAGCTGAGAAATT 296 |||||||||||||||||||||||||||||||| |||| || ||||||||||| | ||||| Sbjct 238 AATCGAGTTTATGTTTCTGAAGAAATCAGAGATGAGGCCA-TTTCAAGAGCTAACAAATT 296 Query 297 CCAGGATGAATTGGGGAGTGGTCACCCAAGTTTTGTGAAATCTATGCTTCAATCACATGT 356 ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct 297 TCAGGATGAATTGGGGAGTGGTTATCCAAGTTTTGTGAAATCTATGCTTCAATCACATGT 356 Query 357 TTCTGGTGGCTTCTGGCTGGGACTTCCAGTTCAATTCTGTAGATCTCACCTCGGGAAACA 416 ||||||||||||||||||||| |||||||| ||||| || | ||||||||||||| ||| Sbjct 357 TTCTGGTGGCTTCTGGCTGGGTCTTCCAGTGCAATTTTGCAAATCTCACCTCGGGTTACA 416 Query 417 AGATGGTGTCATAACTTTGATAGATGAAGAAGGCGAGGAGTATGAGACTATCTACTTAGC 476 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 417 TGATGGTGTCATAACTTTGATAGATGAAGAAGGCGAGGAGTATGAGACTATCTACTTAGC 476 Query 477 GAGAAAGAATGGACTTAGTGGTGGATGGATGGGGTTTGCTATTGCTCACAATCTAGCATA 536 ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct 477 GAGAAAGAATGGACTTAGTGGTGGATGGATGGGATTTGCGGTTGCTCACAATCTAGCATA 536 Query 537 TGGGGATACTCTTGTTTTCGAGTTAGTTCGTCGTACCGCTTTCAAGATTTACATTACAAG 596 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 537 TGGGGATACTCTTGTTTTCGAGTTAGTTCGTCGTACCGCTTTCAAGGTTTACATTACAAG 596 Query 597 AGTTGGAAGTTCTGGAGAAAGCTCAAAAGATATGAGCTGA 636 ||||||||||| |||||||||||| ||||||||||||||| Sbjct 597 AGTTGGAAGTTGTGGAGAAAGCTCCAAAGATATGAGCTGA 636 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 30693063817 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5