BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg331346 Length=1380 Score E Sequences producing significant alignments: (Bits) Value AT5G49340.1 | Symbols: TBL4 | TRICHOME BIREFRINGENCE-LIKE 4 | c... 2156 0.0 > AT5G49340.1 | Symbols: TBL4 | TRICHOME BIREFRINGENCE-LIKE 4 | chr5:20007348-20009038 REVERSE LENGTH=1374 Length=1374 Score = 2156 bits (1167), Expect = 0.0 Identities = 1311/1381 (95%), Gaps = 8/1381 (1%) Strand=Plus/Plus Query 1 ATGGCGGATCTAAAGAATCTCTTCCTCATCACGAAACATCCATCAACAACACAAAtcttc 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1 ATGGCGGATCTAAAGAATCTCTTCCTCATCACGAAACATCCATCAACAACACAGATCTTC 60 Query 61 tttacgtctctcttcttcatctctctcttcctcctctcatcttcttctctatccgacttc 120 | ||||||||||||||| | ||||||||||||||||| ||||||||||| || || ||| Sbjct 61 CTAACGTCTCTCTTCTTCCTTTCTCTCTTCCTCCTCTCCTCTTCTTCTCTCTCAGATTTC 120 Query 121 tctccatcgctcatcgtctctagcttcacctctcgtcttctcacagcagcaaacttcttc 180 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 TCTCCATCACTCATCGTCTCTAGCTTCACCTCTCGTCTTCTCACAGCAGCAAACTTCTTC 180 Query 181 tcttctccttcttcttattcttcttcttcctctgcttcAGACACAACTATGTTTCTCTCC 240 ||||||||||||||||| | |||||||||||||||| ||||||||||||||||| Sbjct 181 TCTTCTCCTTCTTCTTA------TACTTCCTCTGCTTCAGATACAACTATGTTTCTCTCT 234 Query 241 TCTGTTTCTCCCAGAAGAATCAACGAGCCAAAGATTGATTCGGAGACTAAAGAACTCACT 300 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct 235 TCTGTTTCTCCCAGAAGAATCAACGAGCCAAAGATTGATTCGGAGACCAAAGAACTCGCT 294 Query 301 TCTTGCGACATTTTTGATGGAACTTGGGTCTTCGACGATTCTGAACCGGTTTATCTTCCT 360 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 295 TCTTGCGACATTTTTGATGGAACTTGGGTCTTTGACGATTCTGAACCGGTTTATCTTCCT 354 Query 361 GGTTATTGTCCTTTCATTGAAGATAAATTCAATTGCTTCAAAAATGGTCGACCTGATTCG 420 ||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||| Sbjct 355 GGTTATTGTCCTTTCGTTGAAGATAAATTCAACTGCTTCAAGAATGGTCGACCTGATTCG 414 Query 421 GGTTTTCTCCGTCATCGATGGCAACCTCATGGATGCTCGATTCCAAGATTCGATGGGAAG 480 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 415 GGGTTTCTCCGTCATCGATGGCAACCTCATGGATGCTCGATTCCAAGATTCGATGGGAAG 474 Query 481 AAGATGCTGAAGATTCTGAGAGGGAAAAGAGTTGTTTTTGTTGGAGATTCATTGAATAGA 540 |||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 475 AAGATGTTGAAGATGCTGAGAGGGAAAAGAGTTGTTTTTGTTGGTGATTCATTGAATAGA 534 Query 541 AACATGTGGGAGTCTCTGGTTTGTTCACTTAGGTCAACATTGGAAGACAAAAACAGAGTT 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 535 AACATGTGGGAGTCTCTGGTTTGTTCACTTAGGTCAACATTGGAAGACAAAAACAGAGTT 594 Query 601 TCTAGGGTT-TCTGGAAAACAGAGTAATCTTCATAACGAAGGCTTTTACGGTTTCAGATT 659 |||| | || | |||||||||||||||||||| |||||||||||||||||||||||| || Sbjct 595 TCTAAGATTAT-TGGAAAACAGAGTAATCTTCCTAACGAAGGCTTTTACGGTTTCAGGTT 653 Query 660 CAAAGACTTTGAATGCTCTATTGACTTCATCAAATCACCATTCCTCGTTCAAGAATCAGA 719 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 654 CAATGACTTTGAATGCTCTATTGACTTCATCAAATCACCATTCCTCGTTCAAGAATCAGA 713 Query 720 AGTTTTAGATGTATACGGCAAGAGAAGAGAGACACTGAGACTCGATATGATTCAACGATC 779 |||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct 714 AGTTGTAGATGTATACGGGAAGAGAAGAGAGACACTGAGACTCGATATGATTCAAAGATC 773 Query 780 GATTAAGAAGATACACAAAAACGCAGACATTGTTATATTTAACACTGGTCACTGGTGGAC 839 ||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 774 GATGACGAAGATATACAAAAACGCAGACATTGTTATATTTAACACTGGTCACTGGTGGAC 833 Query 840 TCACCAGAAAACCTATGAAGGGAAAGGTTATTTCCAGGAAGGAAATCGAGTTTACGAAAG 899 ||||||||||||||| |||||||||||||||| ||||||||||||| | ||||||||||| Sbjct 834 TCACCAGAAAACCTACGAAGGGAAAGGTTATTACCAGGAAGGAAATAGGGTTTACGAAAG 893 Query 900 ATTAGAAGTGAAAGAAGCTTACACAAAAGCTCTTCATACATGGGCTGATTGGGTTGATTC 959 ||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||| Sbjct 894 ATTAGAAGTGAAAGAAGCTTATACAAAAGCTATTCATACATGGGCTGACTGGGTTGATTC 953 Query 960 CAGTATCAACAGTACTAAAACCAGAGTCTTCTTCGTTGGTTATTCCTCTTCACATTTTAG 1019 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 954 CAATATCAACAGTACTAAAACCAGAGTCTTCTTCGTTGGTTATTCCTCTTCACATTTTAG 1013 Query 1020 AAAAGGGGCGTGGAACAACGGAGGACAATGCGATGGAGAAACAAGACCGATACAGAACGA 1079 ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct 1014 AAAAGGGGCGTGGAATAGCGGAGGACAATGCGATGGAGAAACAAGACCGATACAGAACGA 1073 Query 1080 GACGTACACCGGAGTGTATCCATGGATGATGAAAGTTGTGGAATCGGTGATCTCGGATAT 1139 |||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||| || Sbjct 1074 AACGTACACAGGAGTGTATCCATGGATGATGAAAGTTGTAGAATCTGTGATCTCGGAAAT 1133 Query 1140 GAAAACGCCTGTGTTTTACATGAATATTACGAAGATGACTTGGTACAGAACCGATGGTCA 1199 |||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||| Sbjct 1134 GAAAACGCCTGTGTTTTACATGAACATTACGAAGATGACTTGGTACCGAACAGATGGTCA 1193 Query 1200 TCCGTCGATTTACAGACAACCTGCCGACCCCCGAGGAAGTACTCCTGCAGCTGGAATGTT 1259 ||||||| |||||||||| || |||||||||||||||| | |||||||||| ||||||| Sbjct 1194 TCCGTCGGTTTACAGACAGCCCGCCGACCCCCGAGGAACTTCTCCTGCAGCGGGAATGTA 1253 Query 1260 CCAAGATTGTAGCCATTGGTGCTTACCTGGAGTTCCTGATTCATGGAATCAGCTTCTCTA 1319 |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1254 CCAAGATTGTAGTCATTGGTGCTTACCTGGAGTTCCTGATTCATGGAACCAGCTTCTCTA 1313 Query 1320 CGCTACTTTGCTAGTTTCACATGGTTCCTTGCCTGACAAGTCACTTGGAAGTCTCTTGTA 1379 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1314 CGCTACTCTGCTAGTTTCACATGGTTCCTTGCCTGACAAGTCACTTGGAAGTCTCTTGTA 1373 Query 1380 A 1380 | Sbjct 1374 A 1374 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 67971537930 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5