BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg331445
Length=1848
Score E
Sequences producing significant alignments: (Bits) Value
AT5G50400.1 | Symbols: ATPAP27, PAP27 | purple acid phosphatase... 2765 0.0
AT4G24890.1 | Symbols: ATPAP24, PAP24 | purple acid phosphatase... 1507 0.0
> AT5G50400.1 | Symbols: ATPAP27, PAP27 | purple acid phosphatase
27 | chr5:20523575-20526469 REVERSE LENGTH=2074
Length=2074
Score = 2765 bits (1497), Expect = 0.0
Identities = 1737/1852 (94%), Gaps = 20/1852 (1%)
Strand=Plus/Plus
Query 1 ATGGCTAGGAATTTTTTGTTTGTGCTTCTGTGGTTCATCGTACAGGTGGCTTCAAGCTTG 60
|||||||||||||| ||||| |||||||| ||||||||||||||||| | | |
Sbjct 239 ATGGCTAGGAATTTCTTGTTAGTGCTTCTATGGTTCATCGTACAGGT-G--T----C--- 288
Query 61 TGTTCAAGTCAAGAAAATGGACGTGGTGATCAAGCACTGTCTCAAATTGATATTTACACC 120
||||||||| |||||||||||||| |||||||||||||||||||||||||| ||| ||
Sbjct 289 --TTCAAGTCACGAAAATGGACGTGGAGATCAAGCACTGTCTCAAATTGATATATACGCC 346
Query 121 ATAAATTTTGCTCTGTATCACTCTGCTTCCATTCACGCTTCCCCTCTTGTTCTTGGTTCC 180
|||||||| |||| | |||||||||||| ||||||| ||||||||||||||||||||||
Sbjct 347 ATAAATTTAGCTCAGCATCACTCTGCTTTTATTCACGTTTCCCCTCTTGTTCTTGGTTCC 406
Query 181 CAGGGTGAGGACACAGAATGGGTAAATGTTGATATTTCAAATCCGGAGCCTTCTTCAGAC 240
|||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct 407 CAGGGTCAGGACACAGAATGGGTAAATGTTGTTATCTCAAATCCGGAGCCTTCTTCAGAC 466
Query 241 GATTGGGTTGGAGTCTTCTCACCGGCAAACTTCGACTCATCTTCTTGTGCTCCAACAGAT 300
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 467 GATTGGGTTGGAGTCTTCTCACCAGCAAAATTCGACTCATCTTCTTGTGCTCCAACAGAT 526
Query 301 GGCAAAGAGATAGCACCTTTTATTTGCTCAGCTCCTA-TCAAGTACATGTATGCCAAGTC 359
| |||||||||||| |||||||||||||||||||| | ||||||| ||||||||||||||
Sbjct 527 GACAAAGAGATAGCTCCTTTTATTTGCTCAGCTCC-AGTCAAGTATATGTATGCCAAGTC 585
Query 360 CAACCCTGACTTTATGAAGACCGGGAATGCGGTTTTGAAGTTCATGCTTATAAACCAGAG 419
|| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 586 CAGTCCTGACTATATGAAGACTGGGAATGCGGTTTTGAAGTTCATGCTTATAAACCAGAG 645
Query 420 AGCTGATTTCTCCTTTGCCCTCTTCACAGGGGGACTCTCAAATCCAACTCTTGTCGCGAT 479
||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || |
Sbjct 646 AGCTGATTTCTCCTTTGCCCTCTTCACTGGGGGACTCTCAAATCCAACACTTGTCTCGGT 705
Query 480 TTCAAATCATGTATCATTTGTCAATCCTAAAGCTCCTGTTTATCCGCGTCTTGCTTTAGG 539
||||||||||||||| ||| ||||||||||||||||||| ||||| ||||||||||||||
Sbjct 706 TTCAAATCATGTATCGTTTATCAATCCTAAAGCTCCTGTCTATCCACGTCTTGCTTTAGG 765
Query 540 GAAGAATTGGGACGAAATGAGCGTAACATGGACAAGCGGTTATAGCATAGGCGAAGCTGT 599
|||||| |||||||| |||| ||||||||||||||| ||||| | |||||| || |||||
Sbjct 766 GAAGAAATGGGACGAGATGACCGTAACATGGACAAGTGGTTACAACATAGGTGAGGCTGT 825
Query 600 TCCGTTTGTGGAATGGAGTCGGAAGGGAACTCAAAGTAGAAGATCACCAGCTGGTACCTT 659
||||||||||||||||||||| |||||||||| ||||||| |||| ||||||||||||||
Sbjct 826 TCCGTTTGTGGAATGGAGTCGTAAGGGAACTCGAAGTAGACGATCGCCAGCTGGTACCTT 885
Query 660 GACTTTTACCAGAAACAGCATGTGTGGTGCTCCTGCTCGTACTGTTGGTTGGCGCGATCC 719
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 886 GACTTTTACCAGGAACAGCATGTGTGGTGCTCCTGCTCGTACTGTTGGTTGGCGTGATCC 945
Query 720 GGGTTTCATCCACACTGCTTTC-TTGAAAGATCTTTGGCCAAACCTCGAGTACACATACA 778
||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||
Sbjct 946 AGGTTTCATCCACACTGC-TTCATTGAAAGATCTTTGGCCAAACCTCAAGTACACATACA 1004
Query 779 GGATGGGTCATGAGTTGATGAATGGATCGATAATTTGGAGCAAGAATTTCACCTTCAAGT 838
|||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||
Sbjct 1005 GGATGGGTCATGAGTTGATGAATGGATCAATAGTTTGGAGCAAGAATTTCACTTTCAAGT 1064
Query 839 CCTCTCCTTATCCTGGACAAGACTCGTTACAACGGGTCATAATCTTCGGGGACATGGGGA 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1065 CCTCTCCTTATCCTGGACAAGACTCGTTACAACGGGTCATAATCTTCGGGGACATGGGGA 1124
Query 899 AGGGAGAGCGGGATGGGTCAAACGAGTACAATGATTATCAGCCTGGTTCCCTCAACACCA 958
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1125 AGGGAGAGCGGGATGGTTCAAACGAGTACAATGATTATCAGCCTGGTTCTCTCAACACCA 1184
Query 959 CTGACCAACTCATCAAGGACTTGAAGAACATTGACATTGTTTTCCACATTGGAGATATCA 1018
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CTGATCAACTCATCAAGGACTTGAAGAACATTGACATTGTTTTCCACATTGGAGATATCA 1244
Query 1019 CTTACGCAAATGGTTACATCTCACAGTGGGATCAGTTCACAGCTCAAGTTGAACCTATTG 1078
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1245 CTTACGCAAATGGTTACATCTCGCAGTGGGATCAGTTCACAGCTCAAGTTGAACCTATTG 1304
Query 1079 CTTCTACTGTTCCATACATGATCGCAAGTGGAAACCATGAGCGGGATTGGCCAGACTCTG 1138
|||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||
Sbjct 1305 CTTCTACTGTTCCATACATGGTCGCAAGTGGCAACCACGAGCGGGATTGGCCAGACTCTG 1364
Query 1139 GATCTTTCTATGGCGGTAAAGACTCTGGAGGGGAGTGTGGGGTTCCTGCAGAAACAATGT 1198
|||| |||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 1365 GATCCTTCTATGGTGGTAAAGACTCTGGAGGGGAGTGTGGGGTTCCTGCGGAAACCATGT 1424
Query 1199 TTGATTTTCCTGCTGAGAATAAAGCTAAGTTCTGGTACTCTGCGGATTATGGAATGTTTC 1258
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1425 TTGATTTTCCTGCTGAGAACAAAGCTAAGTTCTGGTACTCTGCGGATTATGGAATGTTTC 1484
Query 1259 GGTTCTGTGTAGCGGACACAGAACATGATTGGAGAGAAGGGTCGGAGCAATACCGATTCA 1318
||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||
Sbjct 1485 GGTTCTGTGTAGCGGACACTGAACATGATTGGAGAGAAGGGTCAGAGCAATACCAATTCA 1544
Query 1319 TAGAGCGTTGTCTTGCCTCTGTAGACAGAAAGACTCAGCCTTGGTTGATTTTTACTGCTC 1378
|||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||
Sbjct 1545 TAGAGCGTTGTCTTGCCTCTGTAGACAGAAGGGCTCAGCCTTGGTTGATTTTTATTGCTC 1604
Query 1379 ATCGTGTCCTCGGTTATTCCACAAATGATTGGTATGGCCAAGAAGGTTCCTTTGAAGAGC 1438
||||||| ||||||||||| ||||| ||||||||||| |||||||||||||||||||| |
Sbjct 1605 ATCGTGTTCTCGGTTATTCAACAAACGATTGGTATGGTCAAGAAGGTTCCTTTGAAGAAC 1664
Query 1439 CTATGGGAAGAGAGAGCTTGCAAAAGCTGTGGCAGAAGTATAAAGTAGACATTGCGTTCT 1498
|||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 1665 CTATGGGAAGAGAGAGCTTGCAAAAGCTCTGGCAGAAGTATAAAGTAGACATCGCGTTCT 1724
Query 1499 ACGGCCATGTCCATAACTACGAAAGAACCTGCCCCATTTACCAGAACCAATGTATGGACA 1558
|||| ||||| |||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct 1725 ACGGTCATGTTCATAACTATGAAAGAACATGCCCCATTTACCAGAACCAATGTATGGACA 1784
Query 1559 ATGC-AAAGAGTGGCTACTCAGGAGCCTTCAAAGGAACTATACACGTAGTTGTTGGTGGT 1617
||| ||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1785 ATGAGAAA-AGTCACTACTCAGGAGCCTTCAAAGGAACTATACACGTGGTTGTTGGTGGT 1843
Query 1618 GCAGGAAGTCACTTGTCTCCGTTCAGCTTGCTGAAACCCAACTGGAGTATCTTCAGAGAC 1677
|||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||
Sbjct 1844 GCAGGAAGTCACTTGTCTTCGTTCAGCTCGCTGAAACCCAAGTGGAGTATCTTCAGAGAC 1903
Query 1678 TATGATTACGGGTTTGTGAAGTTGACGGCTTTCGATCACTCCTCCCTTCTCTTCGAATAC 1737
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 1904 TATGATTACGGGTTTGTGAAGTTGACGGCTTTTGATCACTCCTCTCTTCTCTTCGAATAC 1963
Query 1738 AA-AAAGAGCAGCAACGGAGCTGTGCATGACTCCTTCACTATCTTTAGAGAATACAGAGA 1796
|| ||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1964 AAGAAA-AGCAGCAATGGAGCTGTACATGACTCCTTCACTATCTTTAGAGAATACAGAGA 2022
Query 1797 TGTCCTGGCTTGTGTTCGAGATAGCTGCGAACCAACCACTTTAGCTTCATGA 1848
|||| ||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 2023 TGTCTTGGCTTGTGTTCGAGATAGCTGCGAGCCAACCACATTAGCTTCATGA 2074
> AT4G24890.1 | Symbols: ATPAP24, PAP24 | purple acid phosphatase
24 | chr4:12811479-12814449 REVERSE LENGTH=1888
Length=1888
Score = 1507 bits (816), Expect = 0.0
Identities = 1540/1882 (82%), Gaps = 80/1882 (4%)
Strand=Plus/Plus
Query 1 ATGGCTAGGAATTTTTTGTTTGTGCTTCTGTGGTTCA-TCGTACAGGT-GGCTTCAAGCT 58
||||||| | | |||| | ||||||||||| ||| | ||| || | | || || ||||
Sbjct 10 ATGGCTA-G-AGTTTTAG-GTGTGCTTCTGT-GTTTACTCGCACTGTTCAGC-TCGAGCT 64
Query 59 TGTG-TTCAAGTCAAGAAAATGGACGTGGTGATCAAGCAC-TGTCTCAAATTGATATTTA 116
| || || | ||| | ||||| ||||| |||||||||| || |||||||| || ||||
Sbjct 65 TATGTTTGGA-TCATGCCAATGGTCGTGGAGATCAAGCACTTG-CTCAAATTAATGTTTA 122
Query 117 C-ACCATAAATTTTGCTCT-GTATCA-CTCTGCTTC-CA-TTCACGCTTCCCCTCTTGTT 171
| | | || | ||||| | | || | |||| || | |||||||||| |||| |||
Sbjct 123 CGA-AACAAGTCTTGCTTTAG-AT-AGTTCTG--TCAAACTTCACGCTTCGCCTCAAGTT 177
Query 172 CTTGGTTCCCAGGGTGAGGACACAGAATGGGTAAATGTTGATATTTCAAATCCGGAGCCT 231
||||||||||||||||| || ||||||||||||||| ||| ||| || || || ||||
Sbjct 178 CTTGGTTCCCAGGGTGAAGATACAGAATGGGTAAATCTTGCTATCTCCAACCCCAAGCCC 237
Query 232 TCTTCAGACGATTGGGTTGGAGTCTTCTCACCGGCAAACTTCGACTCATCT-TCTTG-TG 289
||||||| |||||| | ||||| ||||| || ||||| ||||| || | | || ||
Sbjct 238 ACTTCAGATGATTGGATAGGAGTTTTCTCTCCAGCAAAATTCGATTCGGGTAAC-TGTTG 296
Query 290 CTCCAAC-A--GATGGCAAAGAGATAGCACCTTTTATTTGCTCAGCTCCTATCAAGTACA 346
||||| | | ||||||||||| | | |||| || ||||| |||| ||||||||||
Sbjct 297 -GCCAACAAGTGGTGGCAAAGAGAAAACTCCTTACATATGCTCTTCTCCCATCAAGTACA 355
Query 347 TGTA-TGCCAAGTC-CAACCCTGACTT-TATGAAGACCGGGAATGCGGTTTTGAAGTT-C 402
|||| || || || | | || || || |||||| ||||||||| | | | ||||| |
Sbjct 356 TGTATTG-TAATTCTC-ATCCAGA-TTACATGAAGTCCGGGAATGTGACTCTCAAGTTCC 412
Query 403 ATGCTTATAAACCAGAGAGCTGATTTCTCCTTTGC-C-CTCTTCACAGGGGGACTCTCAA 460
| | ||||||| |||||||||||| |||||||||| | | ||| || ||| | ||||
Sbjct 413 A-GATTATAAATCAGAGAGCTGATGTCTCCTTTGCACTGTTTTC-CA-ATGGAGT-TCAA 468
Query 461 -ATCCA-ACTCTTGTCGCGATTTCAAATCATGTATCATTT-GTCAATCCTAAAGCTCCTG 517
| ||| || ||| ||| | |||| |||| |||| | ||| ||||||||||||| ||||
Sbjct 469 GAGCCACAC-CTTCTCGGGGTTTCGAATCCTGTAGC-TTTCTTCAATCCTAAAGCACCTG 526
Query 518 TTTATCCGCGTCTTGCTTTAGGGAAGAATTGGGACGAAATGAGCGTAACATGGACAAGCG 577
| |||||||||||||| ||||||||||||||||||||||||| ||| |||||||| || |
Sbjct 527 TCTATCCGCGTCTTGCATTAGGGAAGAATTGGGACGAAATGACCGTGACATGGACTAGTG 586
Query 578 GTTATAGCATAGGCGAAGCTGTTCCGTTT-GTGGAATGGAGTCG-GAAGGGAAC-TCAAA 634
| || | ||||| || |||||||| ||| | ||||||||| | ||||| || || |
Sbjct 587 GGTACAACATAGATGAGGCTGTTCC-TTTCATTGAATGGAGT-GCAAAGGG-ACTTC-CA 642
Query 635 G-TAGAAGATCACCAGCTGGTACCTTGACTTTTACCAGAAACAGCATGTGTGGTGCTCCT 693
| |||||||||||||||||| || ||||| |||| ||||||||||||||||||| ||||
Sbjct 643 GCTAGAAGATCACCAGCTGGAACATTGACCTTTAACAGAAACAGCATGTGTGGTAATCCT 702
Query 694 GCTCG-TACTGTTGGTTGGCGCGATCCGGGTTTCATCCACACTGCTTTCTTGAAAGATCT 752
||||| | ||||||||||| ||||| |||||| |||| ||| ||||||||||||| ||
Sbjct 703 GCTCGCGGC-GTTGGTTGGCGTGATCCTGGTTTCTTCCATACTTCTTTCTTGAAAGAACT 761
Query 753 TTGGCCAAACCTCGAGTACACATACAGGATGGGTCATGAGTTGATGAATGGATCGATAAT 812
||||||||||| ||| |||| ||||||| | || ||||| ||| | ||||| || | |||
Sbjct 762 TTGGCCAAACCGCGAATACATATACAGGCTAGGCCATGACTTGGTCAATGGTTCCACAAT 821
Query 813 TTGGAGCAAGAATTTCACCTTCAAGTCCTCTCCTTATCCTGGACAAGACTCGTTACAACG 872
|||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||
Sbjct 822 TTGGAGCAAGAATTACACCTTTGTGTCCTCTCCTTATCCTGGACAAGACTCGAAACAACG 881
Query 873 GGTCATAATCTTCGGGGACATGGGGAAGGGAGAGCGGGATGGGTCAAACGAGTACAATGA 932
||||||||| || || |||||||| ||||| ||||| ||||| || || |||||||||||
Sbjct 882 GGTCATAATATTTGGTGACATGGGAAAGGGTGAGCGAGATGGCTCGAATGAGTACAATGA 941
Query 933 TTATCAGCCTGGTTCCCTCAACACCACTGACCAACTCATCAAGGACTTGAAGAACATTGA 992
||| |||||||||||||||||||| || |||||| ||||||||||||||||| |||||||
Sbjct 942 TTACCAGCCTGGTTCCCTCAACACAACAGACCAAGTCATCAAGGACTTGAAGGACATTGA 1001
Query 993 CATTGTTTTCCACATTGGAGATATCACTTACGCAAATGGTTA-CATCTCACAGTGGGATC 1051
|||||||||||||||||||||| ||||||| | ||||| || | |||| ||||||||||
Sbjct 1002 CATTGTTTTCCACATTGGAGATCTCACTTATTCCAATGGGTATC-TCTCCCAGTGGGATC 1060
Query 1052 AGTTCACAGCTCAAGTTGAACCTATTGCTTCTACTGTTCCATACATGATCGCAAGTGGAA 1111
|||||||||||||||| | || |||||||||||||| || ||||||||||| ||||| |
Sbjct 1061 AGTTCACAGCTCAAGTCCAGCCCATTGCTTCTACTGTACCCTACATGATCGCCAGTGGCA 1120
Query 1112 ACCATGAGCGGGATTGGCCAGACTCTGGATCTTTCTATGGCGGTAAAGACTCTGGAGGGG 1171
|||||||||| |||||||||||| |||||||||| |||| ||||| |||||| ||||| |
Sbjct 1121 ACCATGAGCGTGATTGGCCAGACACTGGATCTTTTTATGCCGGTACAGACTCCGGAGGAG 1180
Query 1172 AGTGTGGGGTTCCTGCAGAAACAATGTT-TGATTTTCCTGCTGAGAATAAAGCTAAGTTC 1230
||||||| ||||||||||| || ||||| | | |||||||||||||| | |||||| |||
Sbjct 1181 AGTGTGGTGTTCCTGCAGAGACCATGTTCT-ACTTTCCTGCTGAGAACAGAGCTAAATTC 1239
Query 1231 TGGTACTCTGCGGATTATGGAATGTTTCGGTTCTGTGTAGCGGACACAGAACATGATTGG 1290
|||||| | ||||||||||||||||| ||||||||||| |||| ||||| ||||||
Sbjct 1240 TGGTACAAAACAGATTATGGAATGTTTCGCTTCTGTGTAGCAGACAGTGAACACGATTGG 1299
Query 1291 AGAGAAGGGTCGGAGCAATACCGATTCATAGAGCGTTGTCTTGCCTCTGTAGACAGAAAG 1350
|||||||| ||||||||||| |||||| ||| |||||||||| |||| || ||||||
Sbjct 1300 AGAGAAGGCACGGAGCAATACAAATTCATTGAGAATTGTCTTGCCACTGTTGATAGAAAG 1359
Query 1351 ACTCAGCCTTGGTTGATTTTTACT-GCTCATCGTGTCCTCGGTTATTCCACAAATGATTG 1409
|||||||||||| | ||||||| | |||||||||||||| ||||||||||| ||||||||
Sbjct 1360 ACTCAGCCTTGGCTCATTTTTA-TAGCTCATCGTGTCCTTGGTTATTCCACCAATGATTG 1418
Query 1410 GTATGGCCAAGAAGGTTCCTTTGAAGAGCCTATGGGAAGAGAGAGCTTGCAAAAGCTGTG 1469
||||||| ||||||| ||||||||||||||||||||||||| ||| | ||||| |||||
Sbjct 1419 GTATGGCAAAGAAGGAACCTTTGAAGAGCCTATGGGAAGAGAAAGCCTACAAAAACTGTG 1478
Query 1470 GCAGAAGTATAAAGTAGACATTGCGTTCTACGGCCATGTCCATAACTACGAAAGAACCTG 1529
||||||||| ||||||||| |||| ||||||||||||||||||||||| || |||||||
Sbjct 1479 GCAGAAGTACAAAGTAGACCTTGCTTTCTACGGCCATGTCCATAACTATGAGCGAACCTG 1538
Query 1530 CCCCATTTACCAGAACCAATGTATGGACAATGCA-AA-GAGTGGCTACTCA-GGAGCCTT 1586
|||||||||| ||| ||||||| || |||||| | || || | ||||||| ||| ||||
Sbjct 1539 CCCCATTTACGAGAGCCAATGTGTGAACAATG-ATAAGGA-TCACTACTCAGGGA-CCTT 1595
Query 1587 CAAAGGAACTATACACGTAGTTGTTGGTGGTGCAGGAAGTCACTTGTCTCCGTTCAGCTT 1646
|||||||| || || || |||||||||||||||||||||||||||||||| || ||||
Sbjct 1596 TAAAGGAACCATCCATGTTGTTGTTGGTGGTGCAGGAAGTCACTTGTCTCCCTTTAGCTC 1655
Query 1647 GCT-GAAACCCAACTGGAGTATCTTCAGAGACTATGA-TTACGGGTTTGTGAAGTTGACG 1704
|| | | ||||| |||||| | |||||||||| || || |||||||||||||||||
Sbjct 1656 ACTTGTA-CCCAAATGGAGTTTGGTCAGAGACTACGACTTT-GGGTTTGTGAAGTTGACT 1713
Query 1705 GCTTTCGATCACTCCTCCCTTCTCTTCGAATACAAAAAGAGCAGCAACGGAGCT--GTGC 1762
|||| ||||||||| || || ||||| || ||||| |||||||||| | | || |||
Sbjct 1714 GCTTCCGATCACTCATCACTGCTCTTTGAGTACAAGAAGAGCAGCA-CTG-GCCAAGTGT 1771
Query 1763 ATGACTCCTTCA-CTATCTTTAGAGAATACAGAGATGTCCTGGCTTGTGTTCGA-GATAG 1820
|||||||||||| | |||| |||||| ||||||||||| ||||||| || | |||||
Sbjct 1772 ATGACTCCTTCAAC-ATCTCTAGAGATTACAGAGATGTTTTGGCTTGCACTC-ACGATAG 1829
Query 1821 CTGCGAACCAACCACTTTAGCT 1842
|||||| || ||||| | ||||
Sbjct 1830 CTGCGAGCCCACCACATCAGCT 1851
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 91465392990
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5