BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg331461 Length=885 Score E Sequences producing significant alignments: (Bits) Value AT5G50690.1 | Symbols: AtHSD7, HSD7 | hydroxysteroid dehydrogen... 1315 0.0 AT5G50590.1 | Symbols: AtHSD4, HSD4 | hydroxysteroid dehydrogen... 1315 0.0 > AT5G50690.1 | Symbols: AtHSD7, HSD7 | hydroxysteroid dehydrogenase 7 | chr5:20621330-20622638 FORWARD LENGTH=900 Length=900 Score = 1315 bits (712), Expect = 0.0 Identities = 841/901 (93%), Gaps = 17/901 (2%) Strand=Plus/Plus Query 1 ATGGCTTTAATCAACAAGATCCTCAACATCCTTCTTCCTATTGTCACGGTTTCGTTTCTT 60 |||| ||||| |||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 1 ATGGATTTAAACAACAAGATCTTTAACATCCTTCTTCCTATTGTCACGGTTTCGTTTCTT 60 Query 61 TTAGTGTTCATGCCATTTTCAATATTCTTCAAGCTCCTCGGGTTCATAAGGAGATGCAAA 120 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct 61 TTAGTGTTCATGCCATTTTCAATATTCTTCAAGCTCCTCCAGTTCATAAGGGGATGCAAA 120 Query 121 GAGTCTGAGAAAGTCGACGGAAAAGTGGTCATCATCACCGGATCTTCCTCTGGAATTGGT 180 ||||| ||||||||| |||||||||| ||||||||||||||||||||||| |||||||| Sbjct 121 GAGTCCGAGAAAGTCAACGGAAAAGTCGTCATCATCACCGGATCTTCCTCAGGAATTGGC 180 Query 181 GAGCACCTCGCGTATGAGTATGCTCGTAGAGGAGCATACTTGACTCTAGTAGCTCGGAGA 240 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 GAGCACCTAGCGTATGAGTATGCTCGTAGAGGAGCATACTTGACTCTAGTAGCTCGGAGA 240 Query 241 GAGGATCGTCTCCAGGTGGTTGCTGACAGGTGCAGGAAGCTTGGTTCACCAGA-----C- 294 |||||||||||||||||||| |||||| ||||||||||||||||||||||||| | Sbjct 241 GAGGATCGTCTCCAGGTGGTGGCTGACCGGTGCAGGAAGCTTGGTTCACCAGACGTTGCT 300 Query 295 GT--TA--C----A-GTCTCAGTCAT-AGAAGACTGTAAACGTTTTGTTCAAGAAACCAT 344 || || | | ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct 301 GTGGTACGCGGTGATGTCTCAGTCATCA-AAGACTGTAAACGTTTTGTTCAAGAAACCAT 359 Query 345 CTCTCGGTTTGGAAGATTGGATCGCCTGGTGAACAATGCTGGAATTGCAGAGGCCAAATT 404 ||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||| Sbjct 360 CTCTCGGTTTGGAAGATTGGATCACTTGGTGAACAATGCTGGAATTGCGGAGGCCAAATT 419 Query 405 TTTCGATGACTATTCAGAAATTTCGGATGTTCTTCCCATTGTGAATACTAACTTTTGGGG 464 |||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct 420 TTTCGAGGACTATTCTGAAATTTCGGATGTTCTTCCCATTGTGAACACTAACTTTTGGGG 479 Query 465 ACCGGTTTACGCAACACATTTCGCTATACCACATATCAAGAAAACAAAAGGAAAGATCAT 524 |||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct 480 ACCGGTTTACGCGACACATTTCGCTATACCGCATCTCAAGAAAACAAAAGGAAAGATCAT 539 Query 525 AGCGGTTGCATCGCCCGCGGGATGGTCTGGAGTGCCAAGGATGAGCATATATGCTGCAAG 584 |||||||||||| || || |||||||||||||| |||||||||||||||||||||||||| Sbjct 540 AGCGGTTGCATCACCTGCTGGATGGTCTGGAGTACCAAGGATGAGCATATATGCTGCAAG 599 Query 585 CAAAGCAGCTATGATAAACTTCTACGAGACTCTTAGGATCGAGCTTCATCCAGAAGTTGG 644 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 600 CAAAGCAGCTATGATAAACTTCTACGAGACTCTTAGGATCGAGCTTCATCCAGAAGTTGG 659 Query 645 TGTGACAATCGTGTTTCCGGGTCTAATCGAAAACGGAAATACCAATTCGGACCTTTTGGC 704 |||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||| || Sbjct 660 TGTGACAATCGTGTTTCCTGGTCTAATCGAAAACGGAAATACTAATCCGGACCTTTTAGC 719 Query 705 TGAGAAACAAGAGTGGTCACAAGTTGTGGCCATCGAGTCAGCAGCGGTATGCGCCAAAGC 764 |||||||||||| ||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct 720 TGAGAAACAAGACTGGTCGCAAGTTGTGACCATCGAGTCAGCAGCGGAATGCGCCAAAGC 779 Query 765 GGTTGTTAACGGAATATGTAGGGGAAAAACCTTTGTGGCAGAGCCGTCTTGGGTTCGTGT 824 ||| ||||||||||| || || || ||||||||||||||||||||||| ||||||||||| Sbjct 780 GGTAGTTAACGGAATCTGCAGAGGCAAAACCTTTGTGGCAGAGCCGTCGTGGGTTCGTGT 839 Query 825 CCTGTTCTGGCTTAGTGCTATCTGCCCTGAGCTTCTGATCTCTAAGCCTAAAAGGAATTA 884 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 840 CCTGTTCTGGCTTAGTGCTATATGCCCTGAGCTTCTGATCTCTAAGCCTAAAAGGAATTA 899 Query 885 A 885 | Sbjct 900 A 900 > AT5G50590.1 | Symbols: AtHSD4, HSD4 | hydroxysteroid dehydrogenase 4 | chr5:20587988-20589296 FORWARD LENGTH=900 Length=900 Score = 1315 bits (712), Expect = 0.0 Identities = 841/901 (93%), Gaps = 17/901 (2%) Strand=Plus/Plus Query 1 ATGGCTTTAATCAACAAGATCCTCAACATCCTTCTTCCTATTGTCACGGTTTCGTTTCTT 60 |||| ||||| |||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 1 ATGGATTTAAACAACAAGATCTTTAACATCCTTCTTCCTATTGTCACGGTTTCGTTTCTT 60 Query 61 TTAGTGTTCATGCCATTTTCAATATTCTTCAAGCTCCTCGGGTTCATAAGGAGATGCAAA 120 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct 61 TTAGTGTTCATGCCATTTTCAATATTCTTCAAGCTCCTCCAGTTCATAAGGGGATGCAAA 120 Query 121 GAGTCTGAGAAAGTCGACGGAAAAGTGGTCATCATCACCGGATCTTCCTCTGGAATTGGT 180 ||||| ||||||||| |||||||||| ||||||||||||||||||||||| |||||||| Sbjct 121 GAGTCCGAGAAAGTCAACGGAAAAGTCGTCATCATCACCGGATCTTCCTCAGGAATTGGC 180 Query 181 GAGCACCTCGCGTATGAGTATGCTCGTAGAGGAGCATACTTGACTCTAGTAGCTCGGAGA 240 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 GAGCACCTAGCGTATGAGTATGCTCGTAGAGGAGCATACTTGACTCTAGTAGCTCGGAGA 240 Query 241 GAGGATCGTCTCCAGGTGGTTGCTGACAGGTGCAGGAAGCTTGGTTCACCAGA-----C- 294 |||||||||||||||||||| |||||| ||||||||||||||||||||||||| | Sbjct 241 GAGGATCGTCTCCAGGTGGTGGCTGACCGGTGCAGGAAGCTTGGTTCACCAGACGTTGCT 300 Query 295 GT--TA--C----A-GTCTCAGTCAT-AGAAGACTGTAAACGTTTTGTTCAAGAAACCAT 344 || || | | ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct 301 GTGGTACGCGGTGATGTCTCAGTCATCA-AAGACTGTAAACGTTTTGTTCAAGAAACCAT 359 Query 345 CTCTCGGTTTGGAAGATTGGATCGCCTGGTGAACAATGCTGGAATTGCAGAGGCCAAATT 404 ||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||| Sbjct 360 CTCTCGGTTTGGAAGATTGGATCACTTGGTGAACAATGCTGGAATTGCGGAGGCCAAATT 419 Query 405 TTTCGATGACTATTCAGAAATTTCGGATGTTCTTCCCATTGTGAATACTAACTTTTGGGG 464 |||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct 420 TTTCGAGGACTATTCTGAAATTTCGGATGTTCTTCCCATTGTGAACACTAACTTTTGGGG 479 Query 465 ACCGGTTTACGCAACACATTTCGCTATACCACATATCAAGAAAACAAAAGGAAAGATCAT 524 |||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct 480 ACCGGTTTACGCGACACATTTCGCTATACCGCATCTCAAGAAAACAAAAGGAAAGATCAT 539 Query 525 AGCGGTTGCATCGCCCGCGGGATGGTCTGGAGTGCCAAGGATGAGCATATATGCTGCAAG 584 |||||||||||| || || |||||||||||||| |||||||||||||||||||||||||| Sbjct 540 AGCGGTTGCATCACCTGCTGGATGGTCTGGAGTACCAAGGATGAGCATATATGCTGCAAG 599 Query 585 CAAAGCAGCTATGATAAACTTCTACGAGACTCTTAGGATCGAGCTTCATCCAGAAGTTGG 644 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 600 CAAAGCAGCTATGATAAACTTCTACGAGACTCTTAGGATCGAGCTTCATCCAGAAGTTGG 659 Query 645 TGTGACAATCGTGTTTCCGGGTCTAATCGAAAACGGAAATACCAATTCGGACCTTTTGGC 704 |||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||| || Sbjct 660 TGTGACAATCGTGTTTCCTGGTCTAATCGAAAACGGAAATACTAATCCGGACCTTTTAGC 719 Query 705 TGAGAAACAAGAGTGGTCACAAGTTGTGGCCATCGAGTCAGCAGCGGTATGCGCCAAAGC 764 |||||||||||| ||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct 720 TGAGAAACAAGACTGGTCGCAAGTTGTGACCATCGAGTCAGCAGCGGAATGCGCCAAAGC 779 Query 765 GGTTGTTAACGGAATATGTAGGGGAAAAACCTTTGTGGCAGAGCCGTCTTGGGTTCGTGT 824 ||| ||||||||||| || || || ||||||||||||||||||||||| ||||||||||| Sbjct 780 GGTAGTTAACGGAATCTGCAGAGGCAAAACCTTTGTGGCAGAGCCGTCGTGGGTTCGTGT 839 Query 825 CCTGTTCTGGCTTAGTGCTATCTGCCCTGAGCTTCTGATCTCTAAGCCTAAAAGGAATTA 884 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 840 CCTGTTCTGGCTTAGTGCTATATGCCCTGAGCTTCTGATCTCTAAGCCTAAAAGGAATTA 899 Query 885 A 885 | Sbjct 900 A 900 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 43201366420 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5