BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg331481 Length=555 Score E Sequences producing significant alignments: (Bits) Value AT5G50930.1 | Symbols: | Histone superfamily protein | chr5:20... 754 0.0 > AT5G50930.1 | Symbols: | Histone superfamily protein | chr5:20722069-20724440 FORWARD LENGTH=852 Length=852 Score = 754 bits (408), Expect = 0.0 Identities = 450/470 (96%), Gaps = 3/470 (1%) Strand=Plus/Plus Query 87 ACACAGGCGAAGAAAACCTAGCTCTTGCTTCGCCATGGACGTCGGAGGAGAAGACATAAG 146 |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 262 ACACAGGCGAAG-AAACCTAGCTATTGCTTCGCCATGGACGTCGGAGGAGAAGACATAAG 320 Query 147 CGATCTCCAGGTAGACCAAATCGTTGAAGAAGATTCCATGGATGATCTCATTAGAGACCG 206 ||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||| Sbjct 321 CGATCTCCAGGTAGACCAAATCGTTGAAGAATATTCTATGGACGATCTCATTAGAGACCG 380 Query 207 ATTCAGACTCTCCGCGATCTCTATCGCCGAAGCCGAGGCGAAGAAAAATGGAATGGAAAT 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 381 ATTCAGACTCTCCGCGATCTCTATCGCCGAAGCCGAGGCGAAGAAAAATGGAATGGAAAT 440 Query 267 AGGAGGACCTGTTGTGGCATGTGTGGCGGATTTAGCCTTCAAATATGCAGAAAATGTTGC 326 ||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct 441 AGGTGGACCTGTTGTGGCATGTGTGGCAGATTTAGCCTTCAAATATGCAGAAAACGTTGC 500 Query 327 AAAGGA-CGTTGAACTATTTGCTCATCATGCTGGACGCAAAGTTGTGAACATGGACGATG 385 |||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 501 AAAGGATC-TTGAACTATTCGCTCATCATGCTGGACGCAAAGTTGTGAACATGGACGATG 559 Query 386 TTGTTCTCTCCGCTCATAGAAACGATAACTTAGCTGCGTCTTTGAGGTCATTGTGCAATG 445 ||||||||||||| |||||||||||||||||||| || |||||||||||| | ||||||| Sbjct 560 TTGTTCTCTCCGCGCATAGAAACGATAACTTAGCAGCATCTTTGAGGTCACTATGCAATG 619 Query 446 AGTTAAAGGCAAAAGAGCCACAATCGGATAGGAAACGCAAGAAAGGATCAGCCAAGAAAG 505 || |||||||||| ||||||||||| || ||||||||||||||||||||||||||||||| Sbjct 620 AGCTAAAGGCAAAGGAGCCACAATCTGAGAGGAAACGCAAGAAAGGATCAGCCAAGAAAG 679 Query 506 AAGACAAAGCCAGTAGTAGCAATGCCGTTCGCATCACGACCGATCTGTAA 555 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 680 AAGACAAAGCCAGTAGTAGCAATGCCGTTCGCATCACGACCGATCTGTAA 729 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 26624097910 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5