BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg331707 Length=762 Score E Sequences producing significant alignments: (Bits) Value AT2G05914.1 | Symbols: | Potential natural antisense gene, loc... 176 3e-43 > AT2G05914.1 | Symbols: | Potential natural antisense gene, locus overlaps with AT2G05915 | chr2:2263151-2264542 REVERSE LENGTH=1392 Length=1392 Score = 176 bits (95), Expect = 3e-43 Identities = 140/161 (87%), Gaps = 5/161 (3%) Strand=Plus/Plus Query 584 TGACCATGACCAATCTGTCGTCCTTCGAATCCCTCGAGGATGATCTCTCGATTCACCGTG 643 |||||||||| |||||| |||||||||||||| ||||||||| | ||||||||||||||| Sbjct 1154 TGACCATGACTAATCTGGCGTCCTTCGAATCCTTCGAGGATGCTTTCTCGATTCACCGTG 1213 Query 644 ATCTCACATGTCTCAATGTGCTTCCAAGTCCT-T-GCCTCAAAGCTCTCATGGATTTAAA 701 ||||||| ||| |||||| ||||||||| || | | |||||||||||||||||||||| Sbjct 1214 ATCTCACTTGTTTCAATGCGCTTCCAAG--CTATGGTTTCAAAGCTCTCATGGATTTAAA 1271 Query 702 ATCGATGAACCTTATCTATCTTTTTATGGCATTGGG-AATG 741 ||||||| | | ||||| || ||||||| ||||||| |||| Sbjct 1272 ATCGATGTATCGTATCTTTCATTTTATGACATTGGGGAATG 1312 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 37022566339 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5