BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg331771 Length=963 Score E Sequences producing significant alignments: (Bits) Value AT5G54230.1 | Symbols: MYB49, AtMYB49 | myb domain protein 49 |... 1509 0.0 > AT5G54230.1 | Symbols: MYB49, AtMYB49 | myb domain protein 49 | chr5:22016250-22017933 REVERSE LENGTH=1155 Length=1155 Score = 1509 bits (817), Expect = 0.0 Identities = 917/965 (95%), Gaps = 7/965 (1%) Strand=Plus/Plus Query 1 ATGGGAAAATCCTCAAGTTCGGAGGAAAGTGAAGTGAAGAAAGGGCCATGGACTCCGGAG 60 ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 89 ATGGGAAAATCTTCAAGCTCGGAGGAAAGTGAAGTGAAGAAAGGGCCATGGACTCCGGAG 148 Query 61 GAAGACGAGAAGCTCGTCGGCTATATTCAAACGCACGGTCCCGGAAAATGGCGAACCCTT 120 ||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||| Sbjct 149 GAAGACGAGAAGCTCGTAGGCTATATTCAAACGCACGGTCCCGGCAAATGGCGTACCCTT 208 Query 121 CCCAAGAACGCCGGGTTAAAAAGGTGCGGAAAGAGTTGTAGATTGCGATGGACGAATTAT 180 ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct 209 CCCAAGAACGCCGGGTTAAAAAGATGCGGGAAGAGTTGTAGATTGCGATGGACGAATTAT 268 Query 181 CTAAGACCCGATATCAAGAGAGGAGAGTTCTCTCTTCAAGAGGAAGAAACCATCATTCAA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 269 CTAAGACCCGATATCAAGAGAGGAGAGTTCTCTCTTCAAGAGGAAGAAACCATCATTCAA 328 Query 241 CTTCATCGTCTTCTTGGAAACAAATGGTCCGCAATTGCCATTCACTTGCCGGGAAGAACA 300 |||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||| Sbjct 329 CTTCATCGTCTTCTTGGAAACAAATGGTCCGCAATTGCTATTCACTTACCAGGAAGAACA 388 Query 301 GATAATGAAATCAAAAACTATTGGAACACTCATATAAAAAAGAAACTCTTACGAATGGGG 360 ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| Sbjct 389 GATAATGAAATCAAAAACTATTGGAACACACATATTAAAAAGAAACTCTTACGAATGGGG 448 Query 361 ATTGATCCGGTGACTCATTGTCCCCGAATCAATCTTCTCCAGCTCTCTTCGTTTCTCACC 420 |||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||| Sbjct 449 ATTGATCCGGTGACTCATTGTCCCCGCATTAATCTTCTCCAGCTCTCTTCGTTTCTTACC 508 Query 421 TCATCATTGTTTAAATCTATGTCACAACCGATGAATACTCCATTTGATCTCACTACTTCA 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 509 TCATCATTGTTTAAATCTATGTCACAACCGATGAATACTCCATTTGATCTCACTACTTCA 568 Query 481 AGTATTAATCCTGATATCTTGAATCACCTCACTGCCTCTCTCAACAACGTTCAGACCGAA 540 | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 569 AATATTAATCCTGATATCTTGAATCATCTCACTGCCTCTCTCAACAACGTTCAGACCGAA 628 Query 541 TCATACCAACCAAACCAACAGCTTCAAAACGACCTAAACAATGATCAAACCACTTTCACC 600 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct 629 TCATACCAACCAAACCAACAGCTTCAAAACGACCTAAACACTGACCAAACCACTTTCACC 688 Query 601 GGTTTGCTCAACTCATCAACACCACCGGTTCAATGGCAAAACAATGGAGAATACTTGGGA 660 ||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||| Sbjct 689 GGTTTGCTCAACTCA--A-CACCACCCGTTCAATGGCAAAACAATGGAGAATACTTGGGA 745 Query 661 GATTATCTCAGTTATAACGGTTCAGGTGATCCATCTA-TGAACCAAGTCCCTCAAACCGG 719 ||||||| |||||||| |||| ||||||||||||||| | ||| ||||||||||| |||| Sbjct 746 GATTATCACAGTTATACCGGTACAGGTGATCCATCTAAT-AACAAAGTCCCTCAAGCCGG 804 Query 720 AAACTACTCATCGGCCGCATTTGTATCCGATCAAATTAACGACGGTGAAAATTTTAAGGC 779 |||||||||||| ||||||||||||||||| || ||||| || ||||| ||||||||||| Sbjct 805 AAACTACTCATCAGCCGCATTTGTATCCGACCACATTAATGATGGTGAGAATTTTAAGGC 864 Query 780 CGGATGGAATTTCAGCTCATCAATGCTA-CATGGAACTTCGTCAAGCAGCTCGACACCGT 838 ||||||||||||||| |||||||||||| | |||||||| || |||||||||||||||| Sbjct 865 CGGATGGAATTTCAGTTCATCAATGCTAGCG-GGAACTTCATCGAGCAGCTCGACACCGT 923 Query 839 TGGATTCGTCTTCCAATTTTTATGTCAATGGTGGAAGCGAAGATGATAGAGAGAGTTACG 898 || |||||||||| | ||||||||||||||||||||||||||||||||||||||||| | Sbjct 924 TGAATTCGTCTTCGACTTTTTATGTCAATGGTGGAAGCGAAGATGATAGAGAGAGTTTTG 983 Query 899 GTAGCGACATGTTGATGTTTCATCATCATCATGATCAGAATAATAATGCTTTGAATCTAT 958 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 984 GTAGCGACATGTTGATGTTTCATCATCATCATGATCATAATAATAATGCTTTGAATCTAT 1043 Query 959 CATAA 963 ||||| Sbjct 1044 CATAA 1048 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 47119629886 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5