BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg331870
Length=2142
Score E
Sequences producing significant alignments: (Bits) Value
AT5G55400.1 | Symbols: | Actin binding Calponin homology (CH) ... 3504 0.0
AT4G26700.1 | Symbols: ATFIM1, FIM1 | fimbrin 1 | chr4:13463544... 1724 0.0
> AT5G55400.1 | Symbols: | Actin binding Calponin homology (CH)
domain-containing protein | chr5:22455535-22458950 REVERSE
LENGTH=2145
Length=2145
Score = 3504 bits (1897), Expect = 0.0
Identities = 2057/2135 (96%), Gaps = 7/2135 (0%)
Strand=Plus/Plus
Query 1 ATGACTGGTTTTGTGGGTGTTATTGTTTCGGATCCATGGTTACAAAGTCAGCTTACACAA 60
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGTCTGGTTTTGTGGGTGTTATTGTTTCGGATCCATGGTTACAAAGTCAGCTTACACAA 60
Query 61 GTCGAGCTTCGGAGTCTTAATGCCAAGTTTGTTTCGTTGAAGAATCAGAGTGGTAAGGTT 120
|| ||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 61 GTTGAGCTAAGGAGTCTTAATTCCAAGTTTGTTGCGTTGAAGAATCAGAGTGGTAAGGTT 120
Query 121 ACATTAGAGGATCTTCCGTCTGTGTTGGTCAAGGTGAAGTCACTTAGTTCAGCATTTAAG 180
||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct 121 ACATTAGAGGATCTTCCATCTGTGTTGGTCAAGGTGAAGTCACTTAGTTCATCATTTAAG 180
Query 181 GAGAAAGAAATCAGAGAAATCTTGGGAGGTTTGGGTTCTGATTATGAAAGTGATGATGAT 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 GAGAAAGAAATCAAAGAAATCTTGGGAGGTTTGGGTTCTGATTATGAAAGTGATGATGAT 240
Query 241 CTTGATTTCGAATCGTTTCTCAAGGTATATCTAAACTTGCGAGATAAAGCTGCTGATAAA 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 CTTGATTTCGAATCGTTTCTCAAGGTATATCTAAACTTGCGAGATAAAGCTGCTGATAAA 300
Query 301 --T-CTGGTGGTCTTAAGCATTCATCTTCATTTCTTAAAGCCGGCACAACGACTCTTCAT 357
| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 301 GCTGGTGGTGGTCTTAAGCATTCATCTTCATTTCTTAAAGCCGGCACTACGACTCTTCAT 360
Query 358 ACCATAAACCAGTCAGAGAAGGGTTCCTTTGTTCTTCACATTAACAGATATCTTGGGGAT 417
|||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||
Sbjct 361 ACCATAAACCAGTCAGAGAAGGGTTCTTTTGTTCTTCACATCAATAGATATCTTGGGGAT 420
Query 418 GACCCGTTTTTGATGCAGTTTCTTCCTTTAGATCCGGATTCAAATGACTTGTATGAACTT 477
||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 421 GACCCGTTTTTGAAGCAATTTCTTCCTTTAGATCCGGATTCAAATGATTTGTATGAACTT 480
Query 478 GTGAAAGATGGTGTGCTTTTATGTAAGCTTATTAATATAGCAGTTCCTGGGACAATAGAT 537
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 481 GTGAAAGATGGTGTGCTTTTATGTAAGCTTATAAATATAGCAGTTCCTGGGACAATAGAT 540
Query 538 GAACGAGCCATCAACACGAAAAGGGTACTTAACCCATGGGAGAGAAATGAGAATCACACG 597
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 GAACGAGCGATCAACACGAAAAGGGTACTTAACCCATGGGAGAGAAATGAGAATCACACG 600
Query 598 CTCTGTCTCAACTCTGCGAAAGCTGTTGGCTGCAGTGTGGTTAATATTGGGACTCAGGAC 657
|||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 601 CTCTGTCTTAACTCTGCAAAAGCTGTTGGCTGCAGTGTGGTTAATATCGGGACTCAGGAC 660
Query 658 CTGGCTGAAGGACGACCTCATCTGGTGCTTGGATTGATCTCACAACTCATAAAGATTCAA 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 CTGGCTGAAGGACGACCTCATCTGGTGCTTGGATTGATCTCACAACTCATAAAGATTCAA 720
Query 718 CTGCTCGCTGATCTTAGTTTGAAGAAGATGCCTCAACTTGTTGAGTTGGTGGAGGACAAC 777
||||| || ||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 721 CTGCTTGCCGATCTTAGTTTAAAGAAGATGCCTCAGCTTGTTGAGTTGGTGGAGGACAAC 780
Query 778 GAGGATATAGAAGAATTTCTGAGATTACCTCCTGAGAAAGTCTTACTCAAATGGATGAAC 837
||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||
Sbjct 781 GAGGATATAGAAGAATTTCTGAGATTACCCCCAGAGAAAGTCTTGCTCAAATGGATGAAC 840
Query 838 TTCCATCTCAAGAAAGGCGGTTACaaaaaaaCTGTTGGAAATTTTTCATCGGATCTGAAG 897
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 841 TTCCATCTCAAGAAAGGTGGTTACAAAAAAACTGTTGGAAATTTTTCATCGGATCTGAAG 900
Query 898 GATGCACAGGCCTATGCTTATCTTCTTAATGTTCTCGCACCAGAGCATTGTGATCCAGCT 957
|| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 901 GACGCACAGGCCTATGCTTACCTGCTTAATGTTCTCGCACCAGAGCATTGTGATCCAGCA 960
Query 958 ACACTAAATGCAGAGGATGATCTTGAAAGGGCTAACATGGTCCTCGAACACGCAGAGAGA 1017
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 961 ACTCTAAATGCAGAGGATGATCTTGAAAGGGCTAACATGGTCCTCGAACACGCAGAGAGA 1020
Query 1018 ATGAACTGCAAACGGTATTTGACTGCAGAGGA-ACTAGTTGAGGGGTCTTCGTATTTGAA 1076
|||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct 1021 ATGAACTGCAAACGGTATTTGACTGCAGAGGAGA-TAGTTGAGGGGTCTTCGTATTTGAA 1079
Query 1077 TCTCGCATTTGTGGCACAGATATTTCACGAAAGGAATGGCCTTAGCACTGATGGTAGGTT 1136
||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 1080 TCTAGCATTTGTGGCACAGATATTTCATGAAAGGAATGGCCTTAGCACTGATGGTAGATT 1139
Query 1137 CTCCTTTGCGGAGATGATGACTGAGGATTTACAGACTTGCAGAGATGAAAGATGTTACCG 1196
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1140 CTCCTTTGCGGAGATGATGACTGAGGATTTACAGACTTGCAGAGACGAAAGATGTTACCG 1199
Query 1197 GCTATGGATTAACAGCCTCGGGATTGAGAGTTACGTCAATAATGTGTTTGAAGATGTTAG 1256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1200 GCTATGGATTAACAGCCTCGGGATTGAGAGTTACGTCAATAATGTGTTTGAAGATGTTAG 1259
Query 1257 AAACGGATGGATTCTTCTGGAAGTTGTCGACAAGGTCTATCCAGGCTCAGTTAACTGGAA 1316
||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 1260 AAACGGATGGATTCTTCTGGAAGTTGTTGATAAGGTCTATCCAGGCTCAGTTAACTGGAA 1319
Query 1317 GCAGGCTTCAAAACCACCAATTAAAATGCCTTTTAGAAAAGTAGAGAATTGCAATCAAGT 1376
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 1320 GCAGGCTTCAAAACCACCAATTAAGATGCCGTTTAGAAAAGTAGAGAATTGCAATCAAGT 1379
Query 1377 CGTGAAGATTGGGAAAGAGATGAGATTCTCGCTCGTAAATGTAGCTGGAAATGACATAGT 1436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1380 CGTGAAGATTGGGAAAGAGATGAGATTCTCGCTCGTAAATGTAGCTGGAAATGACATTGT 1439
Query 1437 TCAAGGGAATAAGAAGCTTATCCTCGGCTTCTTGTGGCAGTTGATGAGAACCCATATGCT 1496
|||||| ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 1440 TCAAGGAAATAAAAAGCTTATCCTCGGCTTCTTATGGCAGTTGATGAGAACACATATGCT 1499
Query 1497 CCAACTTCTCAAGAGTCTCAGATCTCGGACACGAGGAAAAGACATGACCGACTCAGAAAT 1556
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1500 CCAACTTCTCAAGAGTCTAAGATCTCGGACACGAGGAAAAGACATGACCGACTCAGAAAT 1559
Query 1557 CATAAGCTGGGCAAACAGAAAAGTCAGAATCATGGGGCGGAAATCGCAGATCGAAAGCTT 1616
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1560 CATAAGCTGGGCTAACAGGAAAGTCAGAATCATGGGGCGGAAATCGCAGATCGAAAGCTT 1619
Query 1617 CAAGGATAAGAGTCTATCCAGCGGATTATTCTTCCTCGATCTCCTATGGGCGGTTGAGCC 1676
||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 1620 CAAGGATAAAAGTCTATCGAGCGGATTATTCTTCCTCGATCTTCTATGGGCGGTTGAGCC 1679
Query 1677 AAGAGTTGTTAACTGGAATCTTGTCACCAAGGGTGAATCAGACGATGAGAAGAGATTGAA 1736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1680 AAGAGTTGTTAACTGGAATCTTGTCACCAAGGGTGAATCAGACGATGAGAAGAGATTGAA 1739
Query 1737 TGCTACATACATTGTCAGCGTAGCAAGAAAGCTTGGTTGCTCTGTCTTT-TTGTTGCCGG 1795
|||||||||||||||||||||||||||||||||||||||||| || ||| |||||||| |
Sbjct 1740 TGCTACATACATTGTCAGCGTAGCAAGAAAGCTTGGTTGCTCGGT-TTTCTTGTTGCCAG 1798
Query 1796 AAGATATAGTGGAGGTGAATCAGAAGATGATTCTAATCTTAACGGCAAGTATAATGTATT 1855
||||||| |||||||||||||| |||||||| |||||| |||||||||||||||||||||
Sbjct 1799 AAGATATCGTGGAGGTGAATCAAAAGATGATACTAATCCTAACGGCAAGTATAATGTATT 1858
Query 1856 GGAGCCTTCAGCAACAATCATCATCGTCAGAGAGTTCAAGTTCGAGTTCGGATTCATCAT 1915
|||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 1859 GGAGCCTTCAACAACAATCATCATCGTCAGAGAGTTCAAGTTCGAGTTCAGACTCATCAT 1918
Query 1916 CGACTCACAGCACGACTACGACATGCACTAGCACATGCACGAGCACTGATGCTTCACCAG 1975
| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1919 CAACTCATAGCACGACGACGACATGCACTAGCACATGCACGAGCACTGATGCTTCACCAG 1978
Query 1976 CTCCATCTGTCACGGGTGAAGACGAAGTTTCTTCTTTAAATGGCGAAGTCTCAAGCCTAA 2035
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1979 CTCCATCTGTCACGGGTGAAGACGAAGTCTCTTCTTTAAATGGCGAAGTCTCAAGCCTAA 2038
Query 2036 CCATCGAAGAAGACAATGAAGTCTCGAGCCTAACGATGGAAGAAGACAATGACGCAGAGA 2095
| || |||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct 2039 CGATAGAAGAAGACAATGAAGTCTCGAGCCTAACGATAGAAGAAGACAATGACGCAGACA 2098
Query 2096 TTTTGTCAGATATCACCTCCATCTCAGAGGAAGCA 2130
|||||||||||||||||||||||||||||||||||
Sbjct 2099 TTTTGTCAGATATCACCTCCATCTCAGAGGAAGCA 2133
> AT4G26700.1 | Symbols: ATFIM1, FIM1 | fimbrin 1 | chr4:13463544-13467599
FORWARD LENGTH=2453
Length=2453
Score = 1724 bits (933), Expect = 0.0
Identities = 1576/1883 (84%), Gaps = 58/1883 (3%)
Strand=Plus/Plus
Query 13 GTGGGTGTTATTGTTTCGGATCCATGGTTACAAAGTCAGCTT-ACACAAGTCGAGCTTCG 71
||||||||| | ||||| ||||||||| |||| || ||| || || |||||||| |||||
Sbjct 229 GTGGGTGTTGTCGTTTCTGATCCATGGCTACAGAGCCAG-TTCACTCAAGTCGAACTTCG 287
Query 72 GAGTCTTAATGCCAAGTTTGTTTCGTTGAAGAATCAGAGTGGTAAGGTTAC-ATTAGAGG 130
|| ||| ||| |||||| ||| ||| |||||||||||| ||| ||||| || ||| || |
Sbjct 288 GACTCTCAATTCCAAGTATGTGTCGGTGAAGAATCAGAATGGAAAGGTCACTATT-GAAG 346
Query 131 ATCTTCCGT-CTGTGTTGGTC-AAGGTGAAGTCACTTAGTTCAGCATTTAAGG-AGAAAG 187
||| ||| | || | || | | ||| ||||| |||||||| || ||||||||| || | |
Sbjct 347 ATC-TCCCTCCTCTATTTG-CAAAGCTGAAGGCACTTAGTGCAACATTTAAGGAAG-ACG 403
Query 188 AAATC-AGAGAAAT-CTTGGGAGGTTTGGGTTCTGATTATGAAAGTGATGATGATCTTGA 245
||||| || | || || ||| | ||||||||||| || ||| | |||| |||
Sbjct 404 AAATCAAG-GGTATGCTAGGG-GAATTGGGTTCTGA-TA--CAAG-CA--CTGAT-GTGA 454
Query 246 -TTTCGAATCGTTTCTCAAGGTATATCTAAACTTGC-GAGATAAAGCTGCTGATAAATCT 303
||| ||| |||||||||| ||||||| ||||| | || |||||| ||||| ||||||
Sbjct 455 GTTTTGAAGAGTTTCTCAAGATATATCTCAACTTACTAAG-TAAAGCAGCTGAGAAATCT 513
Query 304 GGTGGTC-T--TAAGCATTCATCTTCATTTCTTAAAGCCGGCACAACG--AC-TCTTCAT 357
||||||| | |||| | ||||| || ||||| ||||| | |||||| || ||||||
Sbjct 514 GGTGGTCATCATAAGAACTCATCCTCGTTTCTGAAAGCTTGTACAACGACACTTCTTCAC 573
Query 358 ACCATAAACCAGTCAGAGAAGGGTTCC-TTTGTTCTTCACATTAACAGATATCTTGGGGA 416
|| ||| | ||||| |||||||| ||| ||||||| ||||| || |||||||| |||||
Sbjct 574 ACTATATATCAGTCGGAGAAGGG-TCCTTTTGTTCAGCACATCAATAGATATCTAGGGGA 632
Query 417 TGACCCGTTTTTGATGCAGTTTCTTCCT-TTAGATCCGGATTCAAATGACTTGTATGAAC 475
|||||| ||||||| |||||| |||||| || || || |||| ||| | ||||||||||
Sbjct 633 TGACCCCTTTTTGAAGCAGTTCCTTCCTCTT-GACCCTCATTCTAATCAATTGTATGAAC 691
Query 476 TTGTGAAAGATGGTGTGCTTTTATGTAAGCTTATTAATATAGCAGTTCCTGGGACAATAG 535
|||||||||||||||| ||| ||||||||||||| ||| |||| ||||| |||||||| |
Sbjct 692 TTGTGAAAGATGGTGTCCTTCTATGTAAGCTTATAAATGTAGCTGTTCCCGGGACAATTG 751
Query 536 ATGAACGAGCCATCAACACGAAAAGGGTACTTAACCCATGGGAGAGAAATGAGAATCACA 595
|||||||||| |||||||| || ||||||||||| || ||||||||||||||||||||||
Sbjct 752 ATGAACGAGCGATCAACACTAAGAGGGTACTTAATCCGTGGGAGAGAAATGAGAATCACA 811
Query 596 CGCTCTGTCTCAACTCTGCGAAAGCTGTTGGCTGCAGTGTGGTTAATATTGGGACTCAGG 655
|||| |||||||||||||| ||||||||||| ||| ||| ||||||||||| || || |
Sbjct 812 CGCTTTGTCTCAACTCTGCTAAAGCTGTTGGATGCTCTGTTGTTAATATTGGCACACAAG 871
Query 656 ACCTGGCTGAAGGACGACCTCATCTGGTGCTTGGATTGATCTCACAACTCATAAAGATTC 715
||||||| |||||||| ||||| |||||||| |||||||| |||||||||||||||||||
Sbjct 872 ACCTGGCCGAAGGACGGCCTCACCTGGTGCTCGGATTGATTTCACAACTCATAAAGATTC 931
Query 716 AACTGCTCGCTGATCTTAGTTTGAAGAAGATGCCTCAACTTGTTGAGTTGGTGGAGGACA 775
|| | || |||||||| | ||| ||||||| |||||| |||||||||||| | |||||||
Sbjct 932 AAGTACTTGCTGATCTCAATTTAAAGAAGACGCCTCAGCTTGTTGAGTTGCTTGAGGACA 991
Query 776 ACGAGGATATAGAAGAATTTCTGAGATTACCTCCTGAGAAAGTCTTACTCAAATGGATGA 835
||| ||| | || || || ||||||||||| ||||||||||||||||| ||||||||||
Sbjct 992 GCGATGATGTCGAGGAGTTGCTGAGATTACCCCCTGAGAAAGTCTTACTGAAATGGATGA 1051
Query 836 ACTTCCATCTCAAGAAAGGCGGTTACaaaaaaaCTGT-TGGAAATTTTTCATCGGATCTG 894
|||||||||| |||||||| |||||||| ||||| || | ||| ||||| | ||| ||
Sbjct 1052 ACTTCCATCTTAAGAAAGGGGGTTACAAGAAAACCGTCT-CAAACTTTTCCGCAGATTTG 1110
Query 895 AAGGATGCACAGGCCTATG-CTTATCTTCTTAATGTTCTCGCACCAGAGCATTGTGATCC 953
||||||||||| || |||| ||| ||| || |||||||||||||| || || ||||| ||
Sbjct 1111 AAGGATGCACAAGCGTATGCCTT-TCTGCTCAATGTTCTCGCACCTGAACACTGTGACCC 1169
Query 954 AGCTACACTAAATGCAGAGGATGATCTTGAAAGGGCT-AACATGGTCCTCGA-ACACGCA 1011
||||||||| ||||| ||||| ||||||||| ||| || |||| ||| | || |||
Sbjct 1170 GGCTACACTAGATGCAAAGGATCCTCTTGAAAGAGCTGAA-TTGGTTCTC-AGTCATGCA 1227
Query 1012 GAGAGAATGAACTGCAAACGGTATTTGACTGCAGAGGA-ACTAGTTGAGGGGTCTTCGTA 1070
||||||||||||||||| || || |||||||||||||| | | ||||| || ||||| |
Sbjct 1228 GAGAGAATGAACTGCAAGCGATACTTGACTGCAGAGGAGA-TCGTTGAAGGATCTTC-AA 1285
Query 1071 -TTTGAATCTCGCATTTGTGGCACAGATATTTCACGAAAGGAATGGCCTTAGCACTGATG 1129
||||||||| || ||||||||||| || || || ||||||||||| || | || ||||
Sbjct 1286 CTTTGAATCTTGCCTTTGTGGCACAAATCTTCCATGAAAGGAATGGTCTAAACAAGGATG 1345
Query 1130 GTAGGTTCT-CCTTTGCGGAGATGATGACTGAGGATTTACAGACTTGCAGAGATGAAAGA 1188
||| | | | | ||||||||||||||||| || || || ||||||| ||||||||| ||
Sbjct 1346 GTAAG-TATGCATTTGCGGAGATGATGACCGAAGACGTAGAGACTTGTAGAGATGAACGA 1404
Query 1189 TGTTACCGGCTATGGATTAACAGCCTCGGGATTGAGAGTTACGTCAATAATGTGTTTGAA 1248
|| |||||||||||||| ||||||||||||||||| ||||| ||||||||||| ||||||
Sbjct 1405 TGCTACCGGCTATGGATCAACAGCCTCGGGATTGACAGTTATGTCAATAATGTATTTGAA 1464
Query 1249 GATGTTAGAAACGGATGGATTCTTCTGGAAGTTGTCGACAAGGTCTAT-CCAGGCTCAGT 1307
||||||||||| |||||||||||||| || ||| | |||||||||| | ||| | |||||
Sbjct 1465 GATGTTAGAAATGGATGGATTCTTCTTGAGGTTCTTGACAAGGTCTCTCCCA-GTTCAGT 1523
Query 1308 TAACTGGAAGCAGGCTTCAAAACCACCAATTAAAATGCCTTTTAGAAAAGTAGAGAATTG 1367
||||||||||| ||||| |||||||| ||||| ||||| ||||||||||||||||| ||
Sbjct 1524 CAACTGGAAGCATGCTTCCAAACCACCGATTAAGATGCCGTTTAGAAAAGTAGAGAACTG 1583
Query 1368 CAATCAAGTCGTGAAGATTGGGAAAGAGATGAGATTCTCGCTCGTAAATGTAGCTGGAAA 1427
|||||||||| | ||||| |||||| || | | |||||| || |||||||||||||||||
Sbjct 1584 CAATCAAGTCATAAAGATCGGGAAACAGCTAAAATTCTCACTTGTAAATGTAGCTGGAAA 1643
Query 1428 TGACATAGTTCAAGGGAATAAGAAGCTTATCCTCGG-CTTCTTGTGGCAGTTGATGAGAA 1486
||||||||||||||||||||||||||| || || || || ||| |||||||||||||||
Sbjct 1644 TGACATAGTTCAAGGGAATAAGAAGCTCATTCTTGGTCT-CTTATGGCAGTTGATGAGAT 1702
Query 1487 CCCATATGCTCCAACTTCTCAAGAGTCTCAGATCTCGGACACGAGGAAAAGACATGACCG 1546
||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||| |
Sbjct 1703 TCCATATGCTCCAACTTCTCAAGAGTCTCAGATCTCGGACACTAGGTAAAGAGATGACTG 1762
Query 1547 ACT-CAGAAATCATAAGCTGGGCAAACAGAAAAGTCAGAATCA-TGGGGCGGAAATCGCA 1604
| | |||| ||| | |||||||| ||||| ||||| |||| || |||| || |||| |||
Sbjct 1763 A-TGCAGATATCCTCAGCTGGGCCAACAGGAAAGTAAGAA-CAATGGGACGAAAATTGCA 1820
Query 1605 GATCGAAAGCTTCAAGGATAAGAGTCTATCCAGCGGATTATTCTTCCTCGATCTCCTATG 1664
||||| || |||||||| ||||||||||| || || |||||||||||| | || |||||
Sbjct 1821 AATCGAGAGTTTCAAGGACAAGAGTCTATCGAGTGGGTTATTCTTCCTCAACCTTCTATG 1880
Query 1665 GGCGGTTGAGCCAAGAGTTGTTAACTGGAATCTTGTCACCAAGGGTGAATCAGACGATGA 1724
||||||||| ||||||||||| ||||||||||||||||||||||||||| |||| |||||
Sbjct 1881 GGCGGTTGAACCAAGAGTTGTGAACTGGAATCTTGTCACCAAGGGTGAAACAGATGATGA 1940
Query 1725 GAAGAGATTGAATGCTACATACATTGTCAGCGTAGCAAGAAAGCTTGGTTGCTCTGTCTT 1784
|||||| ||||||||||||||||| || || || ||||||||||| ||||| || || ||
Sbjct 1941 GAAGAGGTTGAATGCTACATACATAGTTAGTGTCGCAAGAAAGCTCGGTTGTTCGGT-TT 1999
Query 1785 T-TTGTTGCCGGAAGATATAGTGGAGGTGAATCAGAAGATGATTCTAATCTTAACGGCAA 1843
| ||||| || |||||||| ||||||||||||||||||||||| ||||| ||||||||||
Sbjct 2000 TCTTGTTACCTGAAGATATCGTGGAGGTGAATCAGAAGATGATCCTAATTTTAACGGCAA 2059
Query 1844 GTATAATGTATTGGAGCCTTCAG 1866
|||||||||| ||||| ||||||
Sbjct 2060 GTATAATGTACTGGAGTCTTCAG 2082
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 106224353220
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5