BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg331954 Length=351 Score E Sequences producing significant alignments: (Bits) Value AT5G56480.1 | Symbols: | Bifunctional inhibitor/lipid-transfer... 494 3e-139 > AT5G56480.1 | Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr5:22870326-22870817 REVERSE LENGTH=342 Length=342 Score = 494 bits (267), Expect = 3e-139 Identities = 316/340 (93%), Gaps = 2/340 (1%) Strand=Plus/Plus Query 1 ATGAAAGAACAGATCTTTTACCAGTTTCTAGTCGTAATCATGTTGTTGTCATCATCTCAA 60 |||||||||||||| |||| |||||| |||||||||| ||||||||||||||||||||| Sbjct 1 ATGAAAGAACAGATATTTTGTCAGTTTTTAGTCGTAATGATGTTGTTGTCATCATCTCAA 60 Query 61 ATTCAGGGGGAGAGATGTGATGATTCAGGCATAGAATTTCTGAGGGGATGTCCAGATTCT 120 |||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||| Sbjct 61 ATTCAGGGGGAGAGATGTAATGATTCAGGCATCGAAGTTCTGAGGGGATGTCCAGATTCT 120 Query 121 ATCGACAAGGAGCTGCCAACTCCACCAAGACCATCCCAAGATTGTTGCACTCTTGTCCGA 180 ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| Sbjct 121 ATCGACAAGGAGCTGCCAACTCCGCCAAGACCATCCCAAGGTTGTTGCACTCTTGTCCGA 180 Query 181 ATCATCGGGATGAAATGCATATGCGAAGTCATCAATAAGAGAA-TCGAAGCCGTCATTGA 239 |||||||||||| |||| |||||||||||||||||||| ||| ||||||||| |||||| Sbjct 181 ATCATCGGGATGGAATGTGTATGCGAAGTCATCAATAAG-GAAATCGAAGCCGCCATTGA 239 Query 240 TATGCAAAAGCTAGTCAATGTCGCGGCTGCTTGTGGCAGCCCTCTTGCTCCTGGTTCACA 299 ||||||||||||||||||||||||||||||||||||| | || ||||||||||| ||||| Sbjct 240 TATGCAAAAGCTAGTCAATGTCGCGGCTGCTTGTGGCCGTCCACTTGCTCCTGGCTCACA 299 Query 300 TTGCGGAAGCTACCTAGTTCCCGGTGGCATGGTGAGACAT 339 |||||||| ||||||||||||||||||||| | |||||| Sbjct 300 ATGCGGAAGTTACCTAGTTCCCGGTGGCATGATTAGACAT 339 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 16437553923 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5