BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg332462 Length=708 Score E Sequences producing significant alignments: (Bits) Value AT5G62280.1 | Symbols: | Protein of unknown function (DUF1442)... 1066 0.0 > AT5G62280.1 | Symbols: | Protein of unknown function (DUF1442) | chr5:25017073-25018246 FORWARD LENGTH=1064 Length=1064 Score = 1066 bits (577), Expect = 0.0 Identities = 668/712 (94%), Gaps = 5/712 (1%) Strand=Plus/Plus Query 1 ATGGCTTTTTGGTCTGCTGAGAATGCTACAAAAGCCTATCTTAGTACATTGAAAACGGAT 60 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 93 ATGGCTTTTTGGTCTGCTGAGAATGCTACTAAAGCCTATCTTAGTACATTGAAAACGGAT 152 Query 61 CAAAGGACAAAAGAACCAAACGTGGCCGAATTCATATCAGCCCTAGCGGCCGGCAATAGC 120 ||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||| Sbjct 153 CAAAGGACAAAAGAACCAAACGTCGCCGAATTCATATCAGCCCTAGCCGCCGGAAATAGC 212 Query 121 GCCAGAAAAATTGCTGTGGCTTGCGCCGGAGCAGCAAACGCGGACATACTCGTTGCCCTA 180 || ||||| || || |||||||||||||||||||||||||| |||||||||||||| ||| Sbjct 213 GCTAGAAAGATAGCCGTGGCTTGCGCCGGAGCAGCAAACGCCGACATACTCGTTGCACTA 272 Query 181 ATCGCAGCAGCCAACCAAACTCGCGGTCAAGTTGTATGCGTTTTACGCGGCATTGAAGAA 240 |||||||| || |||||||| || ||||||||||||||||||||||| || || |||||| Sbjct 273 ATCGCAGCGGCTAACCAAACGCGTGGTCAAGTTGTATGCGTTTTACGTGGTATCGAAGAA 332 Query 241 CTAATCATAT-CCAAGAAAATGTTGGAACCATCAGAGATTCATCAGATACAATTCGTTGT 299 |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| || Sbjct 333 CTAATCATATCCCAA-AAAATGTTGGAACCATCAGAGATTCATCAGATACAATTCGTAGT 391 Query 300 CGGAGAATCTAACGACGACATTCTAATCAATGATCATTTCGGAGAAGCAGATTTCGTTCT 359 |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| || Sbjct 392 CGGAGAATCTAACGACGACACTCTAATCAATAATCATTTCGGAGAAGCAGATTTCGTCCT 451 Query 360 CGTGGATTGTAACCTCGAGAACCACCAAGAGATCGTTAGAAAGATCCTTAATCATCACGC 419 |||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||| Sbjct 452 CGTGGATTGTAACCTCGAAAACCACCAAGAGATCGTTGGAAAAATCCTTAATCATCACGA 511 Query 420 AGAAAACGCTAGAACCGGTGGTGGAAGCGGTATGGCGGTTGTGGTGGGTTATAACGCGTT 479 ||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||| Sbjct 512 AGAAAACGCAAGAACCGGGGGTGGAAGCGGTGTGGCGGTTGTGGTGGGTTATAACGCGTT 571 Query 480 TTCGAGAGGGTCGTGGAGGTTTAGCGATGGTAGGAAAACGCAGTTTTTGCCTATAGGAGA 539 |||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct 572 TTCGAGAGGGTCATGGAGGTTTAGCGATGGAAGGAAAACGCAGTTTTTACCTATAGGAGA 631 Query 540 AGGGTTGCTTGTGACGAGGGTCAACGATAATCAGAAGATGCCGATGAAAAATCACCATCG 599 |||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct 632 AGGGTTACTTGTGACGAGGGTCAATGATAATCAGAAGATGATGATGAAAAATCACCATCG 691 Query 600 TGAGCAA--G-TGAGGAAGAGTCGTTGGGTGGTGAAGGTTGATAAGTGCACTGGAGAGGA 656 ||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 692 TGACCAAGTGATGAGGAAGAGTCGTTGGGTGGTGAAGGTTGATAAGTGCACTGGAGAGGA 751 Query 657 ACATGTGTTTAGGGTTAGGGTTCCAAGAGGAGAAGCCATTATTGAGGCTTAA 708 |||||||||||||||||||||||| ||||||||||||||||||| |||||| Sbjct 752 ACATGTGTTTAGGGTTAGGGTTCCCCGAGGAGAAGCCATTATTGAAGCTTAA 803 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 34309922401 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5