BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg332523

Length=396
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT5G62980.1 | Symbols: FOLB2 | Dihydroneopterin aldolase | chr5...   599    7e-171


> AT5G62980.1 | Symbols: FOLB2 | Dihydroneopterin aldolase | chr5:25276034-25277266 
FORWARD LENGTH=634
Length=634

 Score =  599 bits (324),  Expect = 7e-171
 Identities = 372/396 (94%), Gaps = 0/396 (0%)
 Strand=Plus/Plus

Query  1    ATGGAGAAAGACATGGCATTGATGGGAGACAAACTGATACTGAGAGGTTTGAAATTTTAC  60
            |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| 
Sbjct  56   ATGGAGAAAGACATGGCAATGATGGGAGACAAACTGATACTGAGAGGCTTGAAATTTTAT  115

Query  61   GGTTTCCATGGAGCTATTTCTGAAGAGAAGACGCTTGGCCAGATGTTTATGCTTGATATA  120
            |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || 
Sbjct  116  GGTTTCCATGGAGCTATTCCTGAAGAGAAGACGCTTGGCCAGATGTTTATGCTTGACATC  175

Query  121  GATGCTTGGATGTGTCTCAAAAAGGCCGGTCTATCAGACAACTTAGCTGATTCAATCAGC  180
            |||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||
Sbjct  176  GATGCTTGGATGTGTCTCAAAAAGGCTGGTCTATCAGACAACTTAGCTGATTCTGTCAGC  235

Query  181  TATGTCGACATTTACAACTTGGCAAAGGAAGTTGTAGAAGGATCATCAAGAAACCTTCTG  240
            |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct  236  TATGTCGACATTTACAACGTGGCAAAGGAAGTTGTAGAAGGGTCATCAAGAAACCTTCTG  295

Query  241  GAGAGAGTTGCAGGACTTATAGCTTCCAAAACTCTGGAAACATTCCCTCAGATTACCGCT  300
            |||||||||||||||||||||||||||||||||||||||| || ||||| ||| || |||
Sbjct  296  GAGAGAGTTGCAGGACTTATAGCTTCCAAAACTCTGGAAATATCCCCTCGGATAACAGCT  355

Query  301  GTTCGAGTGAAGCTATGGAAGCCAAATGTTCCGCTTATTCAAAGCGGTCTCGATTATTTA  360
            |||||||||||||||||||||||||||||| ||||||||||||||  | |||||||||||
Sbjct  356  GTTCGAGTGAAGCTATGGAAGCCAAATGTTGCGCTTATTCAAAGCACTATCGATTATTTA  415

Query  361  GGGGTTGAAATTTTCAGAAATCGCGCAACTGAATAA  396
            || || || ||||||||| |||||||||||||||||
Sbjct  416  GGTGTCGAGATTTTCAGAGATCGCGCAACTGAATAA  451



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 18699602628


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5