BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg332725 Length=1584 Score E Sequences producing significant alignments: (Bits) Value AT5G65090.1 | Symbols: MRH3, BST1, DER4 | DNAse I-like superfam... 2682 0.0 > AT5G65090.1 | Symbols: MRH3, BST1, DER4 | DNAse I-like superfamily protein | chr5:26004017-26006851 FORWARD LENGTH=1914 Length=1914 Score = 2682 bits (1452), Expect = 0.0 Identities = 1545/1590 (97%), Gaps = 6/1590 (0%) Strand=Plus/Plus Query 1 ATGAACAACAGAGGAGATAATGATGACC-A-A-GACCACTATCGAGTTTTCAATGATTTT 57 |||||||| |||||| |||||||||||| | | |||||||| ||||||||||||||||| Sbjct 130 ATGAACAATAGAGGAAATAATGATGACCTAGACCACCACTATGGAGTTTTCAATGATTTT 189 Query 58 GAGCGACGAATGGCTTCTCGAAAGAAATCGATTCTTGACAACACTTCTCCAATGATTTGG 117 |||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 190 GAGCGACGAATGACGTCTCGAAAGAAATCGGTTCTTGACAACACTTCTCCAATGATTTGG 249 Query 118 AAGACTGTTTCTGAGAGAAAGTCAAGTCCTGGAATTGAAGGCTTGAATCTGTCGAGTTTC 177 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 250 AAGACTGTTTCTGAGAGAAAGTCAAGTCCTGGAATTGAAGGCTTGAATCTATCGAGTTTT 309 Query 178 GATAGGCCTATGGCACCAACAACAGAGATTCGTGAACTCAGGGTGTTTCTAGCTACGTGG 237 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 310 GATAGGCCTATGGCACCAACTACAGAGATTCGTGAACTCAGGGTGTTTCTAGCTACGTGG 369 Query 238 AACGTAGGAGGAAGAACACCAAACAATGATCTTAACCTCGAAGACTTCTTACTCGTTGAA 297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 370 AACGTAGGAGGAAGAACACCAAACAATGATCTTAACCTCGAAGACTTCTTACTCGTTGAA 429 Query 298 GGCACAGCAGATTTATATATCTGTGGGTTTCAAGAGATTGTTCCTCTAAGTGCAGGAAAC 357 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 430 GGCACAGCAGATTTATATATCTGTGGCTTTCAAGAGATTGTTCCTCTAAGTGCAGGAAAC 489 Query 358 GTATTAGTAGTTGAGGATAACGAGCCTGCAGCTAAATGGTTAGCTCTAATAAGTCAAGCT 417 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 490 GTATTAGTAGTTGAGGATAACGAGCCAGCAGCTAAGTGGTTAGCTCTAATAAGTCAAGCT 549 Query 418 TTAAACAAACCGAAACAAGAATCTGTTTATTCGAATGCAGCTTTCTCTGCTTCAAGAACA 477 ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct 550 TTAAACAAACCGAAACAGGAATCTGTTTATTCGAATGCAGCTTACTCTGCTTCAAGAACA 609 Query 478 ACTACTTGTAGTAGTAGTAGTTGTGGTAGTGAAGAATCAAGAACACCAAGTAGTCTAAGT 537 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 610 ACTACTTGTAGTAGTAGTAGTTGTGGTAGTGAAGAATCAAGAGCACCAAGTAGTCTAAGT 669 Query 538 TTCTTTCAAAGACCAAATCTTAAAGTTTTGAGCAGAAACTATAGGGTTGATTCAAGTCTT 597 |||||||||||||| |||||||| || ||||||||||| ||||| || |||||||||||| Sbjct 670 TTCTTTCAAAGACCGAATCTTAAGGTCTTGAGCAGAAATTATAGAGTCGATTCAAGTCTT 729 Query 598 TTAAAGACTTGTAATTGTCCGGTTATCGATACTTCGGTTGGTTGGGAAGCGAGGAGATCG 657 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 730 TTAAAGACTTGTAATTGTCCGGTTATCGATACTTCGGTTGGTTGGGAAGCGAGGAGATCG 789 Query 658 AAAAGGTTTAGTGATCCTAGTACAGATAGTAGTAACAATGTGGAGCCTGAGAACTTTAGG 717 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 790 AAAAGGTTTAGTGATCCTAGTACAGATAGTAGTAACAATGTGGAGCCTGAGAACTTTAGG 849 Query 718 GTTCATGAGAATTTCTTATTTGATGATGTTCCTGCGACTACGAAGATGCCAGGACAAATG 777 ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct 850 GTTCATGAGAATTTCTTGTTTGATGATGTTCCTGCGACTACCAAGATGCCAGGACAAATG 909 Query 778 AGTTATCGATTGATCGCGAGTAAACAGATGGTTGGTTTGTTTTTGTCTGTTTGGGCTAGA 837 |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 910 AGTTATCGATTGATTGCGAGTAAACAAATGGTTGGTTTGTTTTTGTCTGTTTGGGCTAGA 969 Query 838 AGAGAGTTGATTCCACATATATCTCATCTTAGACTTGACTCTGTTGGGAGAGGAATCATG 897 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 970 AGAGAGTTGATTCCACATATATCTCATCTTAGACTTGATTCTGTTGGGAGAGGAATCATG 1029 Query 898 GGTCGCTTAGGGAACAAGGGATGTATTGCTATAAGCATGTCATTGCACCAAACGAGCTTT 957 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1030 GGTCGCTTAGGGAACAAGGGATGCATTGCTATAAGCATGTCATTGCACCAAACGAGCTTT 1089 Query 958 TGCTTTGTGTGTAGCCATTTGGCTTCTGGTGAGAAAGAAGGTGATGAGCTGAGAAGAAAC 1017 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1090 TGCTTTGTGTGTAGCCATTTGGCTTCTGGTGAGAAAGAAGGTGATGAGCTGAGAAGAAAC 1149 Query 1018 GCAGACGTAGCTGAGATTCTGAAACATACTCAATTCCCTAAACTCACCAAGAACCCTAAT 1077 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1150 GCAGACGTAGCTGAGATTCTGAAACATACTCAATTCCCTAAACTCACCAAGAACCCTAAT 1209 Query 1078 TGTCACGCACCCGAAAGAATCGTTGATCATGACCGAGTGCTTTGGCTTGGAGATTTGAAT 1137 ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| Sbjct 1210 TGTCACGCACCCGAAAGAATCATTGATCATGACCGAGTGCTTTGGCTAGGAGATTTGAAT 1269 Query 1138 TACAGAGTTGCATTAACCTATGAAGAGACGAGAGTATTACTAGAAGACAATGATTGGGAC 1197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1270 TACAGAGTTGCATTAACCTATGAAGAGACGAGAGTATTACTAGAAGACAATGATTGGGAC 1329 Query 1198 ACTCTTCTTGAGAGAGACCAGCTAAACATGGAAAGAGGAGCAGGAAGAGTCTTTTCAGGA 1257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1330 ACTCTTCTTGAGAGAGACCAGCTAAACATGGAAAGAGGAGCAGGAAGAGTCTTTTCAGGA 1389 Query 1258 TTTCAAGAAGGTCAAATCTTCTTTGCTCCAACCTATAAGTACTCTCAGAACTCAGATGCT 1317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1390 TTTCAAGAAGGTCAAATCTTCTTTGCTCCAACCTATAAGTACTCTCAGAACTCAGATGCT 1449 Query 1318 TACGCCGGAGAAATGACCAAGTCCAAGAAAAAACGCCGTACTCCTGCTTGGTGTGATCGG 1377 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || Sbjct 1450 TACGCCGGAGAAATGACCAAGTCCAAGAAAAAACGCCGTACTCCGGCTTGGTGTGATAGG 1509 Query 1378 ATTCTATGGAGAGGAGAAGGAATAGAACAGCTTTCATATATTCGAGGCGAATCGCGGTTT 1437 |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1510 ATTCTATGGAAAGGAGAAGGAATAGAACAGCTTTCATATATTCGCGGCGAATCGCGGTTT 1569 Query 1438 TCAGATCATAGACCGGTTTGCGCCATCTTTGCAGTAGAAGTTGATGTGAAGAGTCTGAAC 1497 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||| Sbjct 1570 TCAGATCATAGACCAGTTTGCGCGATCTTTGCAGTAGAAGTTGATGTGAAGAGTCTAAAC 1629 Query 1498 AAAGGTAGATTCAGGAAAGGTTATTCTTGTGCGGCTGCAAGACTGGTTGAAGAT-TG-C- 1554 ||||||||||||||||||||||||||||||||||||| |||| ||||||||||| || | Sbjct 1630 AAAGGTAGATTCAGGAAAGGTTATTCTTGTGCGGCTGTAAGATTGGTTGAAGATGTGGCT 1689 Query 1555 ATTCCACAAAGGCATAGTTTTTATGACTAA 1584 |||||||||||||||||||||||||||||| Sbjct 1690 ATTCCACAAAGGCATAGTTTTTATGACTAA 1719 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 78212449110 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5