BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg332796
Length=1413
Score E
Sequences producing significant alignments: (Bits) Value
AT5G65800.1 | Symbols: ACS5, CIN5, ETO2, ATACS5 | ACC synthase ... 2410 0.0
AT3G49700.1 | Symbols: ETO3, ACS9, AtACS9 | 1-aminocyclopropane... 1408 0.0
AT2G22810.1 | Symbols: ACS4, ACC4, ATACS4 | 1-aminocyclopropane... 536 2e-151
> AT5G65800.1 | Symbols: ACS5, CIN5, ETO2, ATACS5 | ACC synthase
5 | chr5:26330746-26332812 REVERSE LENGTH=1877
Length=1877
Score = 2410 bits (1305), Expect = 0.0
Identities = 1377/1413 (97%), Gaps = 0/1413 (0%)
Strand=Plus/Plus
Query 1 ATGAAACAGCTTTCAACAAAAGTGACAAGCAATGGTCATGGACAAGACTCATCCTACTTC 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 115 ATGAAACAGCTTTCGACAAAAGTGACAAGCAATGGTCATGGACAAGACTCATCCTACTTC 174
Query 61 TTGGGATGGGAAGAGTACGAGAAGAATCCTTACGATGAGATCAAGAACCCTAATGGGATG 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 175 TTGGGATGGGAAGAGTACGAGAAGAATCCTTATGATGAGATCAAGAACCCTAATGGGATG 234
Query 121 ATCCAGATGGGTCTTGCCGAAAACCAGCTATGTTTCGATCTAATCGAGTCATGGTTAGTT 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct 235 ATCCAGATGGGTCTAGCCGAAAACCAGCTATGTTTCGATCTAATCGAGTCATGGTTAACT 294
Query 181 AAGAACCCAGATGCAGCTAGTCTCAAGAGGAACGGTCAATCCATTTTCAGAGAGCTTGCT 240
||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 295 AAGAACCCAGACGCGGCAAGTCTCAAGAGGAACGGTCAATCCATTTTCAGAGAGCTTGCT 354
Query 241 CTCTTTCAAGACTATCATGGCATGCCTGAATTCAAAAAAGCTATGGCTGAGTTTATGGAA 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 355 CTATTTCAAGACTATCATGGCATGCCTGAATTCAAAAAAGCTATGGCTGAGTTTATGGAA 414
Query 301 GAGATAAGAGGAAACCGTGTCACGTTCGATCCAAAAAATATTGTTTTAGCCGCTGGTTCG 360
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 415 GAGATAAGAGGAAACCGTGTCACGTTCGATCCAAAAAAGATTGTTTTAGCGGCTGGTTCG 474
Query 361 ACCTCTGCGAACGAGACTCTCATGTTTTGTCTTGCAGAGCCTGGTGATGCTTTCCTTTTG 420
|| |||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 475 ACATCTGCGAATGAGACTCTCATGTTTTGCCTTGCAGAGCCTGGCGATGCTTTCCTTTTG 534
Query 421 CCTACTCCTTACTATCCTGGATTTGATAGAGATCTTAAATGGAGAACCGGAGCAGAGATA 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 535 CCTACTCCTTACTATCCTGGATTTGATAGAGATCTTAAATGGAGAACCGGAGCAGAGATA 594
Query 481 GTACCCATTCACTGCTCAAGCTCTAATGGCTTCCAAATCACGGAATCAGCTCTGCAACAA 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 595 GTACCCATTCACTGCTCAAGCTCTAATGGCTTCCAAATCACGGAATCAGCTCTGCAACAA 654
Query 541 GCTTACCAACAAGCCGAGAAACTTGATCTTAAAGTCAAAGGAGTTCTTGTCACGAATCCA 600
||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 655 GCTTACCAACAAGCCCAGAAACTTGATCTCAAAGTCAAAGGAGTTCTTGTCACGAATCCA 714
Query 601 TCTAACCCACTTGGCACTGCGTTGACCAGACGTGAGCTTAACCTTCTCGTTGACTTCATC 660
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 715 TCTAACCCACTTGGCACTGCGTTGACCAGACGTGAACTTAACCTTCTCGTTGACTTCATC 774
Query 661 ACTTCCAAGAACATTCATCTCATTAGCGACGAGATCTATTCAGGCACTATGTTCGGGTTT 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 775 ACTTCCAAGAACATTCATCTCATTAGCGACGAGATCTATTCAGGCACTATGTTCGGGTTT 834
Query 721 GAACAGTTCATAAGCGTAATGGATGTCTTGAAAGACAAGAAACTCGAAAACACCGAGGTT 780
|||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct 835 GAACAGTTCATAAGCGTAATGGATGTCTTGAAAGACAAGAAACTCGAAGACACGGAGGTT 894
Query 781 TCAAAACGAGTCCACGTCGTTTATAGCCTTTCCAAAGATTTGGGACTTCCTGGTTTCCGT 840
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct 895 TCAAAACGAGTCCACGTCGTTTATAGCCTTTCTAAAGATCTGGGACTTCCTGGTTTCCGT 954
Query 841 GTGGGAGCGATCTACTCCAACGAAGAAATGATCGTTTCGGCAGCTACAAAAATGTCAAGT 900
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 955 GTGGGAGCGATCTACTCCAACGACGAAATGATCGTTTCAGCAGCTACAAAAATGTCAAGT 1014
Query 901 TTTGGTCTTGTTTCTTCTCAGACACAATACCTTCTCTCTGCATTGCTCTCCGACAAGAAG 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1015 TTTGGTCTTGTTTCTTCTCAGACACAATACCTTCTCTCTGCATTGCTCTCCGACAAGAAG 1074
Query 961 TTCACAAGCCAATACCTCGAAGAGAATCAGAAACGACTCAAGTCCAGACAGAGACGTCTC 1020
||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 1075 TTCACTAGCCAATACCTCGAAGAGAACCAGAAACGACTCAAGTCCAGACAGAGACGCCTC 1134
Query 1021 GTGTCTGGTCTTGAGTCAGCGGGGATTACTTGCCTGAGAAGCAACGCGGGTTTGTTCTGT 1080
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 1135 GTGTCTGGTCTTGAGTCTGCAGGGATTACTTGCCTGAGAAGCAACGCGGGTTTGTTCTGT 1194
Query 1081 TGGGTCGACATGAGACACCTTTTGGACACAAACACATTTGAAGCAGAGCTTGATCTCTGG 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1195 TGGGTCGACATGAGACACCTTTTGGACACAAACACATTTGAAGCAGAGCTTGACCTCTGG 1254
Query 1141 AAAAAGATTGTTTACAACGTGAAACTAAACATCTCACCCGGTTCGTCATGTCACTGCACC 1200
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 1255 AAAAAGATTGTTTACAACGTGAAACTAAACATATCACCCGGTTCTTCATGTCACTGCACC 1314
Query 1201 GAACCGGGTTGGTTTAGGGTTTGTTTCGCTAATATGAGCGAGGATACACTCGATTTGGCC 1260
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1315 GAACCGGGTTGGTTTAGGGTTTGTTTCGCTAATATGAGCGAGGACACACTCGATTTGGCC 1374
Query 1261 TTGAAGAGGCTCAAAACTTTCGTCGAATCCACAGACTGTGGAAGAATGATTTCAAGAAGC 1320
||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||
Sbjct 1375 TTGAAGAGGCTCAAAACTTTCGTAGAATCCACAGACTGTGGACGAATGATATCAAGAAGC 1434
Query 1321 AGCCATGAAAGGCTCAAGAGTTTGAGGAAGAAGACAGTCTCTAACTGGGTTTTCCGGGTT 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1435 AGCCATGAAAGGCTCAAGAGTTTGAGGAAGAAGACAGTCTCTAACTGGGTTTTCCGGGTT 1494
Query 1381 TCATGGACCGATCGTGTACCTGATGAACGATGA 1413
|||||||||||||||||||||||||||||||||
Sbjct 1495 TCATGGACCGATCGTGTACCTGATGAACGATGA 1527
> AT3G49700.1 | Symbols: ETO3, ACS9, AtACS9 | 1-aminocyclopropane-1-carboxylate
synthase 9 | chr3:18434470-18436141 REVERSE
LENGTH=1413
Length=1413
Score = 1408 bits (762), Expect = 0.0
Identities = 1208/1425 (85%), Gaps = 24/1425 (2%)
Strand=Plus/Plus
Query 1 ATGAAACAGCTTTCAACAAAAGTGACAAGCAATGGTCATGGACAAGACTCATCCTACTTC 60
|||||||| || || | ||||||||||||||||| ||||||||||||||| |||||||||
Sbjct 1 ATGAAACAACTGTCGAGAAAAGTGACAAGCAATGCTCATGGACAAGACTCTTCCTACTTC 60
Query 61 TTGGGATGGGAAGAGTACGAGAAGAATCCTTACGATGAGATCAAGAACCCTAATGGGATG 120
|||||||||||||| ||||||||||| |||||||| || ||||||||||||||||||||
Sbjct 61 TTGGGATGGGAAGAATACGAGAAGAACCCTTACGACGAAATCAAGAACCCTAATGGGATT 120
Query 121 ATCCAGATGGGTCTTGCCGAAAACCAGCTATGTTTCGATCTAATCGAGTCATGGTTAGTT 180
|| || ||||||||||||||||| ||||||||||| ||||| || ||| ||||||||| |
Sbjct 121 ATTCAAATGGGTCTTGCCGAAAATCAGCTATGTTTTGATCTCATAGAGACATGGTTAGCT 180
Query 181 AAGAACCCAGATGCAGCTAGTCT-CAAGAGGAACGGTCAATCCATTTTCAGAGAGCTTGC 239
||||| || || ||||| | || || ||| |||| ||||||||||||| |||||||||
Sbjct 181 AAGAATCCGGACGCAGCCGGACTAAAAAAGG-ACGGCCAATCCATTTTCAAAGAGCTTGC 239
Query 240 TCTCTTTCAAGACTATCATGGCATGCCTGAATTCAAAAAAGCTATGGCTGAGTTTATGGA 299
|||||||||||||||||||||| | || |||||||| |||||| |||| |||||||||||
Sbjct 240 TCTCTTTCAAGACTATCATGGCCTACCCGAATTCAAGAAAGCTTTGGCAGAGTTTATGGA 299
Query 300 AGAGATAAGAGGAAACCGTGTCACGTTCGATCCAAAAAATATTGTTTTAGCCGCTGGTTC 359
|| || |||||||| | || || || ||||||| || ||||| |||| ||||||||
Sbjct 300 GGAAATCAGAGGAAATAGAGTAACATTTGATCCAAGCAAGATTGTCCTAGCTGCTGGTTC 359
Query 360 GACCTCTGCGAACGAGACTCTCATGTTTTGTCTTGCAGAGCCTGGTGATGCTTTCCTTTT 419
|| ||||| ||||| ||||||||||||||||| || || || || || |||||||||||
Sbjct 360 AACATCTGCCAACGAAACTCTCATGTTTTGTCTCGCCGAACCCGGGGACGCTTTCCTTTT 419
Query 420 GCCTACTCCTTACTATCCTGGATTTGATAGAGATCTT-AAATGGAGAACCGGAGCAGAGA 478
|| |||||||||||||| ||||| |||||||| ||| ||||||||||| ||||||||||
Sbjct 420 ACCAACTCCTTACTATCCAGGATTCGATAGAGA-CTTGAAATGGAGAACGGGAGCAGAGA 478
Query 479 TAGTACCCATTCACTGCTCAAGCTCTAATGGCTTCCAAATCACGGAATCAGCTCTGCAAC 538
| ||||| ||||| ||||||||||||||||| |||||||| || || |||||||| ||||
Sbjct 479 TCGTACCTATTCATTGCTCAAGCTCTAATGGGTTCCAAATAACAGAGTCAGCTCTTCAAC 538
Query 539 AAGCTTACCAACAAGC-CGAGAAA-CTTGATCTTAAAGTCAAAGGAGTTCTTGTCACGAA 596
||||||| |||||||| | | ||| ||||||||||| ||||||||||||||||| || ||
Sbjct 539 AAGCTTATCAACAAGCTC-A-AAAGCTTGATCTTAAGGTCAAAGGAGTTCTTGTTACCAA 596
Query 597 TCCATCTAACCCACTTGGCACTGCGTTGACCAGACGTGAGCTTAACCTTCTCGTTGACTT 656
|| |||||||| |||||||| |||||||||| | || ||||||||||||||||||||
Sbjct 597 CCCGTCTAACCCTCTTGGCACAATGTTGACCAGAAGAGAACTTAACCTTCTCGTTGACTT 656
Query 657 CATCACTTCCAAGAACATTCATCTCATTAGCGACGAGATCTATTCAGGCACTATGTTCGG 716
||| |||||||| |||||||||||||| |||||||||||||||||||| || | || ||
Sbjct 657 CATTACTTCCAAAAACATTCATCTCATAAGCGACGAGATCTATTCAGGTACCGTTTTTGG 716
Query 717 GTTTGAACAGTTCATAAGCGTAATGGATGTCTTGAAAGACAAGAAACTCGAAAACACCGA 776
|||||||||||| |||| || ||||||||||| ||||||||||| ||||| |||| |||
Sbjct 717 GTTTGAACAGTTTGTAAGTGTCATGGATGTCTTAAAAGACAAGAACCTCGAGAACAGCGA 776
Query 777 GGTTTCAAAACGAGTCCACGTCGTTTATAGCCTTTCCAAAGATTTGGGACTT-CCTGGTT 835
|| || |||||||| || | |||||||| |||||||||||| | || || || ||||
Sbjct 777 AGTCTCCAAACGAGTTCATATTGTTTATAGTCTTTCCAAAGATCTCGGT-TTACCAGGTT 835
Query 836 TCCGTGTGGGAGCGATCTACTCCAACGAAGAAATGATCGTTTCGGCAGCTACAAAAATGT 895
| || || ||||| || ||||||||||| |||||| | ||||| || || ||||||||||
Sbjct 836 TTCGCGTAGGAGCAATTTACTCCAACGACGAAATGGTTGTTTCCGCTGCAACAAAAATGT 895
Query 896 CAAGTTTTGGTCTTGTTTCTTCTCAGACACAATACCTTCTCTCTGCATTGCTCTCCGACA 955
||||||| ||||| || |||||||| ||||| |||||||||||||||||||| || ||||
Sbjct 896 CAAGTTTCGGTCTCGTGTCTTCTCAAACACAGTACCTTCTCTCTGCATTGCTTTCAGACA 955
Query 956 AGAAGTTCACAAGC-CAATACCTCGAAGAGAATCAGAAACGACTCAAG-TCCAGACAGA- 1012
||||||||||||| || |||||||| || || |||||| |||||||| | | | ||||
Sbjct 956 AGAAGTTCACAAGTACA-TACCTCGACGAAAACCAGAAAAGACTCAAGATTC-GTCAGAA 1013
Query 1013 GACGTCTCGTGTCTGGTCTTGA-GTCAGCGGGGATTACTTGCCTGAGAAGCAACGCGGGT 1071
|| |||||||| ||||| || | | || ||||||||||| || | ||||||||| |||
Sbjct 1014 GAAA-CTCGTGTCCGGTCTAGAAG-CTGCAGGGATTACTTGTCTTAAAAGCAACGCTGGT 1071
Query 1072 TTGTTCTGTTGGGTCGACATGAGACACCTTTTGGACACAAACACATTTGAAGCAGAGCTT 1131
|||||||||||||| ||||||||||| |||||||||||||||||||| |||||||| |||
Sbjct 1072 TTGTTCTGTTGGGTTGACATGAGACATCTTTTGGACACAAACACATTCGAAGCAGAACTT 1131
Query 1132 GATCTCTGGAAAAAGATTGTTTACAACGTGAAACTAAACATCTCACCCGGTTCGTCATGT 1191
|| || ||||| |||||||| || |||| || || || || ||||| ||||| || ||
Sbjct 1132 GAGCTATGGAAGAAGATTGTATATGACGTCAAGCTGAATATTTCACCTGGTTCATCGTGC 1191
Query 1192 CACTGCACCGAACCGGGTTGGTTTAGGGTTTGTTTCGCTAATATGAGCGAGGATACACTC 1251
|| || || ||||||||||||||||||||||||||||| || ||||| || ||||| ||
Sbjct 1192 CATTGTACTGAACCGGGTTGGTTTAGGGTTTGTTTCGCCAACATGAGTGAAGATACGCTT 1251
Query 1252 GATTTGGCCTTGAAGAGGCTCAAA-ACTTTCGTCGAATCCACAGACT-GTGGAAGAATGA 1309
|||||||| |||||||||||||| | | ||| || || ||||| | || ||||| |||
Sbjct 1252 GATTTGGCGATGAAGAGGCTCAAAGAGTA-CGTAGAGTCAACAGA-TAGTAGAAGAGTGA 1309
Query 1310 TTTCAAGAAGCAGCCATGAAAGGCTCAAGAGTTTGAGGAAGAAGA-CAGTCTCTAACTGG 1368
|||||| |||||| ||||| ||| |||||||||||||||||| || | ||||| ||||||
Sbjct 1310 TTTCAAAAAGCAGTCATGATAGGATCAAGAGTTTGAGGAAGA-GAACTGTCTCCAACTGG 1368
Query 1369 GTTTTCCGGGTTTCATGGACCGATCGTGTACCTGATGAACGATGA 1413
||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1369 GTTTTCCGGGTTTCATGGACCGACCGTGTACCTGATGAACGATGA 1413
> AT2G22810.1 | Symbols: ACS4, ACC4, ATACS4 | 1-aminocyclopropane-1-carboxylate
synthase 4 | chr2:9717791-9719472 REVERSE LENGTH=1425
Length=1425
Score = 536 bits (290), Expect = 2e-151
Identities = 961/1273 (75%), Gaps = 93/1273 (7%)
Strand=Plus/Plus
Query 13 TCAACAAAAG-TGACAAGCAATGGTCATGGACAAGACTCATCCTACTT-CTTGGGATGGG 70
|||| ||||| | ||| |||| | ||||| |||| ||| || || || ||| || ||||
Sbjct 13 TCAAGAAAAGCT-ACATGCAACAGCCATGGCCAAGTCTCTTCGTATTTCCTT-GGTTGGG 70
Query 71 AAGAGTACGAGAAGAATCCTTACGATGAGATCAAGAACCCT-AATGGGATGATCCAGATG 129
||||||||||||||||||||||||| | | |||||||||| || || || |||||||||
Sbjct 71 AAGAGTACGAGAAGAATCCTTACGACGTTACCAAGAACCCTCAA-GGCATTATCCAGATG 129
Query 130 GGTCTTGCCGAAAACCAGCTATG-TTTCGATCTAATCGAGTCATGG-TTAGTT-AAGAAC 186
|||||||| ||||| |||||||| ||| |||||| | ||||||||| || | || |||
Sbjct 130 GGTCTTGCGGAAAATCAGCTATGCTTT-GATCTACTAGAGTCATGGCTT-GCACAA-AAC 186
Query 187 CCAGATGCAGC-TAGTCTCAAGAG-GAACGGTCAATCCATTTTCAGAGAGCTTGCTCTCT 244
|||| ||||| | || ||||||| || || || || ||||| | || || |||||||
Sbjct 187 ACAGACGCAGCCT-GTTTCAAGAGAGAT-GGCCAGTCTGTTTTCCGGGAACTCGCTCTCT 244
Query 245 TTCAAGACTATCATGGCATGC-CTGAATTCAAAAAAGC-TATGGCTGAGTTT-ATGGAAG 301
|||||||||| |||||| | | || |||||||| || | || |||| ||| ||| ||
Sbjct 245 TTCAAGACTACCATGGCCT-CTCTTCCTTCAAAAATGCCTTTG-CTGA-TTTCATGTCAG 301
Query 302 AGA-TAAGAGGAAACCGTGTCACGTTCGATCCAAAAAATATTGTTTT-AGCCGCTGGTTC 359
| | || ||||||| || || | || ||| |||| || |||| | | | ||||| |
Sbjct 302 AAAATA-GAGGAAATCGAGTTTCTTTTGATTCAAACAACCTTGTGCTCA-CTGCTGGAGC 359
Query 360 GACCTCTGCGAACGAGACTCTCATGTTTTGTCTTGCAGAGCCTGGTGATGCTTTCCTT-- 417
|| || || ||||||||||| ||||||||||||||||| || ||||| |||||| ||
Sbjct 360 CACTTCCGCAAACGAGACTCTAATGTTTTGTCTTGCAGATCCCGGTGACGCTTTC-TTGC 418
Query 418 TTGCCTACTCCTTACTATCCTGGATTTGATAGAGATCTTAAATGGAGAACCGGAGCAGAG 477
|| || || || || ||||| || |||||||| ||||| |||||| ||||||| | |||
Sbjct 419 TTCCC-ACGCCATATTATCCAGGGTTTGATAGGGATCTAAAATGGCGAACCGGGGTTGAG 477
Query 478 ATAGTACCCATTCACTGCTCAAGCT-CTAATGGCTTCCAAATCACGGAA-T--CAGCTCT 533
|| ||||| || || ||||||| | |||| || || | || ||| || | || |||
Sbjct 478 ATTGTACCAATCCAAAGCTCAAG-TACTAACGGGTTTCGCATAACGAAACTTGCA-CTC- 534
Query 534 GCAACAAGCTTACCAACAAGCCGAGAAACTTGATCTTAAA-GTCAAAGGAGTTCTTGTCA 592
| || |||| ||| | |||||| |||| ||||| || ||| ||||||||| | || |||
Sbjct 535 G-AAGAAGCCTACGAGCAAGCCAAGAAGCTTGACCT-AAACGTCAAAGGAATACTCATCA 592
Query 593 CGAATCCATCTAACCCACTTGGC-ACTG-CGTTGACC-AGACGTGAGCTTAACCTTCTCG 649
| || ||||||||||| |||| || | | ||| | || || || ||| ||||
Sbjct 593 CCAACCCATCTAACCCT-TTGGGTAC-GACAACAACCCAAACC-GAACTCAACATTCTAT 649
Query 650 TTGACTTCATCACTTCCAAGAACA-T-T-CATCTCATTA-GCGACGAGATCTATTCAGGC 705
|||| |||||||| || || | | | ||| | | || | |||||||| ||||| |||
Sbjct 650 TTGATTTCATCACCAAGAATAAGAATATACATTT-AGTAAGTGACGAGATATATTCGGGC 708
Query 706 ACTA-TGTTCGGGT-TTGA-ACAGTTCATAAGCGTAATGGATG-T-CTTGAAAGACAAGA 760
|| | | ||| | || | | | ||||| ||||| ||||| | | || ||| | ||
Sbjct 709 AC-AGTATTCAACTCTTCAGA-A-TTCATCAGCGTCATGGA-GATTCTAAAAA-ATAATC 763
Query 761 AACTCGAAAACACCGAGGTTTCAAAACGAGTCCACGTCGTTTATAGCCTT-TCCAAAGAT 819
|||||||||||||||| |||| || ||||||||| | |||| |||| || || ||||||
Sbjct 764 AACTCGAAAACACCGATGTTTTGAACCGAGTCCACATTGTTTGTAGC-TTATCTAAAGAT 822
Query 820 TTGGGACTTCCTGGTTTCCGTGTGGGAGCGATCTACTCCAACGA-AGAA-ATGATCGTTT 877
| || || |||||||| | || ||||| || |||||||| || | || ||| || | |
Sbjct 823 CTAGGCCTCCCTGGTTTTAGAGTTGGAGCCATTTACTCCAATGACA-AAGATG-TCATCT 880
Query 878 CGGCAGCTACAAAAATGTCAAGTTTTGGTCTTGTTTCTTCTCAGACACAATACCTTCTCT 937
| || |||||||||||||||||||| || ||||| || || |||||||||||||| || |
Sbjct 881 CTGCCGCTACAAAAATGTCAAGTTTCGGCCTTGTCTCCTCCCAGACACAATACCTACTAT 940
Query 938 C-TGCATTGCTCTCCGACAAGAAGTTCAC-AAGCCAA-TACCTC-GAAGAGAATCAGAAA 993
| | |||| | || |||||||||||||| ||| || ||||| || ||||| || |||
Sbjct 941 CCT-CATTATTATCTGACAAGAAGTTCACTAAG--AACTACCTTAGA-GAGAACCAAAAA 996
Query 994 CGACTCAAGTCCAGACAGAGAC-GTCTCGTGTCTGG-TCTTGAGTC-AGCGGGGATTACT 1050
|| |||||| |||||||||| | ||||||| ||| ||| ||| | | |||| || |
Sbjct 997 CGGCTCAAGAACAGACAGAGAAAG-CTCGTGT-TGGGTCTAGAGGCCATCGGG-ATCAAA 1053
Query 1051 TGCCTGA-GAAGCAACGCGGGTTTGTTCTGTTGGGTCGACATGAGACAC-CTT-TTGGA- 1106
|| |||| || | || ||||| | || ||||||||||||||||||| | || || ||
Sbjct 1054 TGTCTGAAGA-GTAATGCGGGACTCTTTTGTTGGGTCGACATGAGAC-CTCTCCTTAGAT 1111
Query 1107 CACAAACACATTTGAAGCAGAGCTTGATCTCTGGAAAAAGATTGTTTAC-AACGTGAAAC 1165
| ||| || || ||||| || | ||||| ||||| |||||||||||| || ||||| |
Sbjct 1112 CT-AAA-ACGTTCGAAGCGGAAATGGATCTTTGGAAGAAGATTGTTTACGAA-GTGAAGC 1168
Query 1166 TAAACATCTCACCCGGTTCGTCATGTCACTGC-ACCGAACCGGGTTGGTTTAGGGTTTGT 1224
| |||||||| || |||||||| || || || | ||||||||||||||||| ||||||
Sbjct 1169 TCAACATCTCTCCTGGTTCGTCGTGCCATTGTGAA-GAACCGGGTTGGTTTAGAGTTTGT 1227
Query 1225 TTCGCTAATATGA 1237
||||| || ||||
Sbjct 1228 TTCGCGAACATGA 1240
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 69628155915
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5