BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg332814 Length=879 Score E Sequences producing significant alignments: (Bits) Value AT5G67580.1 | Symbols: TRB2, ATTRB2, TBP3, ATTBP3 | Homeodomain... 1310 0.0 > AT5G67580.1 | Symbols: TRB2, ATTRB2, TBP3, ATTBP3 | Homeodomain-like/winged-helix DNA-binding family protein | chr5:26955135-26957743 REVERSE LENGTH=1862 Length=1862 Score = 1310 bits (709), Expect = 0.0 Identities = 841/901 (93%), Gaps = 23/901 (3%) Strand=Plus/Plus Query 1 ATGGGTGCCCCAAAGCAGAAGTGGACACCGGAAGAAGAAGCAGCTCTTAAAGCTGGAGTT 60 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 255 ATGGGTGCACCAAAGCAGAAGTGGACACCGGAAGAAGAAGCAGCTCTTAAAGCTGGAGTT 314 Query 61 CTTAAGCATGGCACTGGGAAGTGGCGTACCATACTCTCCGATACTGAGTTTAGTTTAATC 120 ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 315 CTTAAGCATGGGACTGGGAAGTGGCGTACCATACTCTCGGATACTGAGTTTAGTTTAATC 374 Query 121 CTTAAGTCTCGCTCAAATGTTGATCTTAAGGACAAGTGGAGAAACATAAGCGTGACAGCT 180 |||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||| Sbjct 375 CTTAAGTCTCGCTCTAATGTTGATCTTAAGGACAAATGGAGAAATATAAGCGTGACAGCT 434 Query 181 TTATGGGGTTCAAGGAAGAAGGCTAAACTTGCGCTTAAAATGACTCCGCC-GGCTACTAA 239 |||||||||||||||||||||||||||||||||||||| | |||||| || || |||||| Sbjct 435 TTATGGGGTTCAAGGAAGAAGGCTAAACTTGCGCTTAAGAGGACTCCACCAGG-TACTAA 493 Query 240 ACAGGATGATAACAACACAGCTCTTAGCATTGTGGCTTTGGCTAATGACGATGAACGGGC 299 |||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||| || Sbjct 494 ACAGGATGATAACAACACAGCTCTTACCATTGTGGCTTTGACTAATGATGATGAACGTGC 553 Query 300 AAAACCAACTT--CCC-------CTGGAGGT---T---------CTTGTGCTTCAAAGAG 338 ||||||||||| ||| |||| ||| | |||||||||| ||||| Sbjct 554 AAAACCAACTTCCCCCGGAGGTTCTGGTGGTGGATCACCACGCACTTGTGCTTCTAAGAG 613 Query 339 ATCAATTACAAGTTTGGATAAGATCATCTTGGAGGCAATTACTAACTTGAAGGAACTACG 398 |||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||| Sbjct 614 ATCAATTACAAGTTTGGATAAGATCATCTTTGAGGCAATTACCAACTTGAGGGAACTACG 673 Query 399 CGGTTCTGACAGAACATCGATCTTTCTGTATATAGAGGAGAATTTCAAGACTCCACCGAA 458 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 674 CGGTTCTGACAGAACATCAATCTTTCTGTATATAGAGGAGAATTTCAAGACTCCACCGAA 733 Query 459 TATGAAAAGACATGTCGCAGTACGATTAAAGCATTTATCATCGAATGGAACATTAGTTAA 518 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 734 TATGAAAAGGCATGTCGCAGTACGATTAAAGCATTTATCATCGAATGGAACATTAGTTAA 793 Query 519 GATAAAGCACAAGTACAGGTTTTCTTCTAATTTTATCCCCGTAGGAGCAAGACAGATGTC 578 |||||||||||||||||||||||||||||||||||| |||| ||| |||||||||| | | Sbjct 794 GATAAAGCACAAGTACAGGTTTTCTTCTAATTTTATTCCCGCAGGTGCAAGACAGAAGGC 853 Query 579 TCCTCAACTCTTTTTGGAAGGAAACAACAAGAAAGACCCACCAAAACCCGAGGAGAACGG 638 ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 854 TCCTCAACTCTTTCTGGAAGGAAACAACAAGAAAGACCCAACAAAACCCGAGGAGAACGG 913 Query 639 CGCCAAAAGCCTCACTAAGTCCCGAGTAGACGGTGAGTTATTTATGATAAAAGGCATGAC 698 ||||| || |||||||| | ||||||||||||||| |||| |||||||||||||||||| Sbjct 914 TGCCAACAGTCTCACTAAATTCCGAGTAGACGGTGAATTATATATGATAAAAGGCATGAC 973 Query 699 AGCTCAAGAAGCTGCAGAGGCTGCAGCAAGAGCAGTTGCAGAGGCAGAATTTGCTATCAC 758 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 974 AGCTCAAGAAGCTGCAGAGGCTGCAGCAAGAGCAGTTGCAGAGGCAGAATTTGCTATCAC 1033 Query 759 AGAGGCTGAAGAAGCAGCAAAAGAGGCAGCAAGAGCAGAAGCAGAAGCTGAAGCTGCTCA 818 |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1034 AGAGGCTGAACAAGCAGCAAAAGAGGCAGAAAGAGCAGAAGCAGAAGCTGAAGCTGCTCA 1093 Query 819 GATATTTGCAAAGGCAGCCATGAAAGCTTTGAAGTTCAAGATCCGTAATCATCCTTGGTG 878 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1094 GATATTTGCAAAGGCAGCCATGAAAGCTTTGAAGTTCAGGATCCGTAATCATCCTTGGTG 1153 Query 879 A 879 | Sbjct 1154 A 1154 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 42899961538 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5