BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg332992
Length=1527
Score E
Sequences producing significant alignments: (Bits) Value
AT4G13280.1 | Symbols: ATTPS12, TPS12 | terpenoid synthase 12 |... 1188 0.0
AT4G13300.1 | Symbols: ATTPS13, TPS13 | terpenoid synthase 13 |... 1133 0.0
> AT4G13280.1 | Symbols: ATTPS12, TPS12 | terpenoid synthase 12
| chr4:7733114-7736745 REVERSE LENGTH=1622
Length=1622
Score = 1188 bits (643), Expect = 0.0
Identities = 802/876 (92%), Gaps = 21/876 (2%)
Strand=Plus/Plus
Query 1 ATGGAATCCCAAACAACGTTCAAATGTGAAAGTCATGCGTTCACAAAGTTGTCTCACTCT 60
|||||||||||||||||||| || | |||||||| ||||||||||||||||||||||| |
Sbjct 1 ATGGAATCCCAAACAACGTTTAAGTATGAAAGTCTTGCGTTCACAAAGTTGTCTCACTGT 60
Query 61 CAATGGACTGATTACTTCCTCTCTGTTCCTATCGATGAATTGGAACTAGGTGTTATTACA 120
||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||
Sbjct 61 CAATGGACTGATTACTTCCTCTCTGTTCCCATCGATGAATCGGAACTAGATGTTATTACA 120
Query 121 AGAGAGATTGAAATACTCAAGCCTGAAGTTAGGGAGCTTCTATCTTCCCACGGTGATGAT 180
||||||||||| ||||||||||| ||||||| |||||| ||||||||||| ||||| |||
Sbjct 121 AGAGAGATTGACATACTCAAGCCGGAAGTTATGGAGCTCCTATCTTCCCAGGGTGACGAT 180
Query 181 GAGACATCGAAGAGGAAAGTGCTTTTGATCCAATTACTTCTAAGTCTTGGTCTCGCATTT 240
||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||
Sbjct 181 GAGACATCGAAGAGGAAAGTGCTTTTGATTCAATTGCTTCTTAGTCTTGGTCTCGCATTT 240
Query 241 CATTTTGAAAATGAGATCAATGATATACTAGAACATGCTTTTCGAAAGTTAGATGATATA 300
|||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 241 CATTTTGAAAATGAGATCAAAAATATACTAGAACATGCTTTTCGAAAGATAGATGATATA 300
Query 301 ATTGGTGATGAAAAGGACTTGTCTACAATCTCCATCATGTTCCGCGTTTTTAGAACATAC 360
| |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 301 ACTGGTGATGAAAAGGACTTGTCTACAATCTCCATCATGTTCCGTGTCTTTAGAACATAC 360
Query 361 GGACACAATTTATCATCAAATGTATTCAAGAGATTTACAGGGGATGATGGGAAGTTTGAG 420
|||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct 361 GGACACAATTTACCATCAAGTGTATTCAAGAGATTTACAGGGGATGATGGGAAGTTTCAG 420
Query 421 CAATCTCTTACAGAAGATGCTAAAGGTATACTTAGCTTC-------CG-CTCACTTGGGA 472
||||||||||| |||||||||||||| ||||||||||| || | |||||||||
Sbjct 421 CAATCTCTTACGGAAGATGCTAAAGGAATACTTAGCTTGTATGAAGCGGCACACTTGGGA 480
Query 473 ACAACGACAGATTATGTATTGGACGAAGCGTTGAAGTTCACATCGAGCCACTTGAAGTCT 532
||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||
Sbjct 481 ACAACGACAGATTATATATTGGACGAAGCGTTGAAGTTTACATCGAGCCACTTGAAGTCT 540
Query 533 TTATTGGCAGGCGGGACGTGCCAGCCTCATATCTTAAGGCTTATAAGAAACACGCTTTAT 592
||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct 541 TTATTGGCAGGAGGGACGTGCCGGCCTCATATCTTAAGGCTTATAAGAAACACACTTTAT 600
Query 593 TTACCTCAACGTTGGAACATGGAAGCAGTAATTGCAAGGGAATACATTACGTTCTACGAA 652
||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||
Sbjct 601 TTACCTCAACGTTGGAATATGGAAGCAGTAATTGCAAGGGAATACATTTCGTTCTATGAA 660
Query 653 CACGAAGAAGATCACGACAAGACGCTACTCAGATTAGCCAAGCTAAATTTCAAGTTATTG 712
|| |||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||
Sbjct 661 CAAGAAGAAGATCACGATAAGATGCTACTCAGATTAGCCAAGCTCAATTTCAAGTTATTG 720
Query 713 CAGCTGCATTACATCAAAGAACTCAAAACTTTTATCAACT-----A-G-A-C----C-TT 759
|||||||||||||| |||||||| ||| |||||||||| | | | | | | ||
Sbjct 721 CAGCTGCATTACATTAAAGAACTGAAATCTTTTATCAAATGGTGGATGGAGCTAGGCCTT 780
Query 760 ACATCTAAGTGGCCAAGTCAATTTAGAGAGCGGATCGTAGAGGCTTGGCTAGCAGGATTG 819
|||||||||||||| ||||||||||||||| ||||||| |||||||||||||| ||||||
Sbjct 781 ACATCTAAGTGGCCTAGTCAATTTAGAGAGAGGATCGTGGAGGCTTGGCTAGCTGGATTG 840
Query 820 ATGATGTATTACGAACCACAATTTTCAGGTGGGAGG 855
|||||||||| ||||||||||||||| ||||| |||
Sbjct 841 ATGATGTATTTCGAACCACAATTTTCGGGTGGAAGG 876
Score = 385 bits (208), Expect = 8e-106
Identities = 267/296 (90%), Gaps = 2/296 (1%)
Strand=Plus/Plus
Query 1233 CGACATGAGTAACGGGTTTGCTGCAAATGCGATCAACTATTATATGAAGCAATTTGTAGT 1292
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1281 CGACATGAGTAATGGGTTTGCTGCAAATGCGATCAACTATTATATGAAGCAATTTGTAGT 1340
Query 1293 TACCAAAGAAGGGGCTATTCTAGAGTGTCAAAAAATGATCGCAAATATCAATAAGATCAT 1352
|||||| |||| ||||||||| |||||||||| |||||||| | |||||||||| |||
Sbjct 1341 TACCAAGGAAGAGGCTATTCTCGAGTGTCAAAGAATGATCGTGGACATCAATAAGACCAT 1400
Query 1353 AAATGAAGAGCTACTTAAGACAACT-GCCGTGTCACCTCGTGTTCTCAAGCAAGCACTCA 1411
|||||| |||||||| |||||||| || || || ||| || |||||||||||||| |
Sbjct 1401 AAATGAGGAGCTACTGAAGACAACCAGC-GTACCAGGTCGAGTACTCAAGCAAGCACTTA 1459
Query 1412 ATTTTAGACGCTTATTGGAAGTCCTTTACACCAAGTCCGATGATATATTCAATTGTAGTG 1471
||||| |||||||||||||| |||| |||||||||||||||||||||| |||||||||||
Sbjct 1460 ATTTTGGACGCTTATTGGAACTCCTCTACACCAAGTCCGATGATATATACAATTGTAGTG 1519
Query 1472 AAGGAAAACTCAAGGAATATATAGTAACTCTGCTCATAGATCCAATACGTCTTTGA 1527
|||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 1520 AAGGAAAACTGAAGGAGTATATAGTAACTCTGCTCATAGATCCCATACGTCTTTGA 1575
Score = 372 bits (201), Expect = 6e-102
Identities = 239/257 (93%), Gaps = 4/257 (2%)
Strand=Plus/Plus
Query 855 GATGACGCGTGCGATCATTATTTCTCTA--GATGAGCTTACAAGACTCGTAGATTGTGTG 912
|||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct 916 GATGACGCGTGCGATCATTATTTCTCTATTCATGAGCTTACAAGACTCGTAGCTTGTGTG 975
Query 913 GAAAGATGGATTCTTGATGGCGTTGACACACTAGGAGATATATCGCGAACTGTCTTCAAA 972
|||||||||| || ||||||| |||||||||| | |||||||||||||| |||||| |||
Sbjct 976 GAAAGATGGAGTCCTGATGGCATTGACACACTTGAAGATATATCGCGAAGTGTCTTTAAA 1035
Query 973 CTTATGTTGGATGTTTTCGACGAGATC-GAAAGAGGAGTGAGGTCTAAAGGAAGCTCTTT 1031
||||||||||||||||||||||| ||| |||| ||||||||||||| |||||||||| |
Sbjct 1036 CTTATGTTGGATGTTTTCGACGATATCGGAAA-AGGAGTGAGGTCTGAAGGAAGCTCCTA 1094
Query 1032 CCACTTGAAGGAGATGTTAGAAGAGCTCAAGACACTCGTGAGAGCAAATCTTGATCTTGT 1091
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1095 CCACTTGAAGGAGATGTTAGAAGAGCTCAATACACTCGTGAGAGCAAATCTTGATCTTGT 1154
Query 1092 CAAATGGGCACGAGGAA 1108
|||||||||||||||||
Sbjct 1155 CAAATGGGCACGAGGAA 1171
> AT4G13300.1 | Symbols: ATTPS13, TPS13 | terpenoid synthase 13
| chr4:7742871-7746363 REVERSE LENGTH=1665
Length=1665
Score = 1133 bits (613), Expect = 0.0
Identities = 793/877 (90%), Gaps = 23/877 (3%)
Strand=Plus/Plus
Query 1 ATGGAATCCCAAACAACGTTCAAATGTGAAAGTCATGCGTTCACAAAGTTGTCTCACTCT 60
|||||||||||||||| |||| | | |||||||| |||||||||||||||||||||||||
Sbjct 1 ATGGAATCCCAAACAAAGTTCGATTATGAAAGTCTTGCGTTCACAAAGTTGTCTCACTCT 60
Query 61 CAATGGACTGATTACTTCCTCTCTGTTCCTATCGATGAATT-GGAACTAGGTGTTATTAC 119
||||||||||||||||||||||||||||| |||||||| || ||| ||| | ||||||
Sbjct 61 CAATGGACTGATTACTTCCTCTCTGTTCCCATCGATGA-TTCGGAGTTAGACGCTATTAC 119
Query 120 AAGAGAGATTGAAATACTCAAGCCTGAAGTTAGGGAGCTTCTATCTTCCCACGGTGATGA 179
|||||||||||| ||| ||||||||||||||||| |||| ||||||||| | ||||||||
Sbjct 120 AAGAGAGATTGACATAATCAAGCCTGAAGTTAGGAAGCTCCTATCTTCCAAAGGTGATGA 179
Query 180 TGAGACATCGAAGAGGAAAGTGCTTTTGATCCAATTACTTCTAAGTCTTGGTCTCGCATT 239
||||||||| ||||||||||||||||||||||||| ||||| || ||||| ||||||||
Sbjct 180 TGAGACATCAAAGAGGAAAGTGCTTTTGATCCAATCGCTTCTTAGCCTTGGCCTCGCATT 239
Query 240 TCATTTTGAAAATGAGATCAATGATATACTAGAACATGCTTTTCGAAAGTTAGATGATAT 299
||||||||||||||| ||||| |||||| ||||| |||||||||||| | ||||||||||
Sbjct 240 TCATTTTGAAAATGAAATCAAAGATATATTAGAAGATGCTTTTCGAAGGATAGATGATAT 299
Query 300 AATTGGTGATGAAAAGGACTTGTCTACAATCTCCATCATGTTCCGCGTTTTTAGAACATA 359
|| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 300 AACTGGTGATGAAAATGACTTGTCTACAATCTCCATCATGTTCCGCGTTTTCAGAACATA 359
Query 360 CGGACACAATTTATCATCAAATGTATTCAAGAGATTTACAGGGGATGATGGGAAGTTTGA 419
||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 360 CGGACACAATTTACCATCAAGTGTATTCAAGAGATTTACAGGGGATGATGGGAAGTTTGA 419
Query 420 GCAATCTCTTACAGAAGATGCTAAAGGTATACTTAGCTTC-------CG-CTCACTTGGG 471
|| |||||| || |||||||||||||| ||||||||||| || | ||||||||
Sbjct 420 GCGATCTCTCACGGAAGATGCTAAAGGAATACTTAGCTTGTATGAAGCGGCACACTTGGG 479
Query 472 AACAACGACAGATTATGTATTGGACGAAGCGTTGAAGTTCACATCGAGCCACTTGAAGTC 531
|||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||
Sbjct 480 AACAACGACAGATTATATATTGGACGAAGCGTTGGAGTTTACATCGAGCCACTTGAAGTC 539
Query 532 TTTATTGGCAGGCGGGACGTGCCAGCCTCATATCTTAAGGCTTATAAGAAACACGCTTTA 591
|||||||| |||||||| ||||| |||||||||||||||||||||||||||||| |||||
Sbjct 540 TTTATTGGTAGGCGGGATGTGCCGGCCTCATATCTTAAGGCTTATAAGAAACACACTTTA 599
Query 592 TTTACCTCAACGTTGGAACATGGAAGCAGTAATTGCAAGGGAATACATTACGTTCTACGA 651
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 600 TTTACCTCAACGTTGGAACATGGAAGCAGTAATTGCAAGGGAATACATTTCGTTCTACGA 659
Query 652 ACACGAAGAAGATCACGACAAGACGCTACTCAGATTAGCCAAGCTAAATTTCAAGTTATT 711
||| |||||||||||||| |||| ||||||||||||||| ||||| ||||||||||||||
Sbjct 660 ACAAGAAGAAGATCACGATAAGATGCTACTCAGATTAGCTAAGCTCAATTTCAAGTTATT 719
Query 712 GCAGCTGCATTACATCAAAGAACTCAAAACTTTTATCAACT-----A-G-A-C----C-T 758
|||||||||||||||||||||||| |||||||||||||| | | | | | | |
Sbjct 720 GCAGCTGCATTACATCAAAGAACTGAAAACTTTTATCAAATGGTGGATGGAGCTAGGCCT 779
Query 759 TACATCTAAGTGGCCAAGTCAATTTAGAGAGCGGATCGTAGAGGCTTGGCTAGCAGGATT 818
||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||
Sbjct 780 TACATCTAAGTGGCCAAGTCAATTTAGAGAGAGGATCGTGGAGGCTTGGCTAGCTGGATT 839
Query 819 GATGATGTATTACGAACCACAATTTTCAGGTGGGAGG 855
||||||||||| ||||||||||||||| ||||| |||
Sbjct 840 GATGATGTATTTCGAACCACAATTTTCTGGTGGAAGG 876
Score = 497 bits (269), Expect = 1e-139
Identities = 342/378 (90%), Gaps = 2/378 (1%)
Strand=Plus/Plus
Query 855 GATGACGCGTGCGATCATTATTTCTCTA--GATGAGCTTACAAGACTCGTAGATTGTGTG 912
|||||||| |||||||| |||||||||| |||||||||||| |||||||||||||||
Sbjct 916 GATGACGCTTGCGATCACTATTTCTCTATTCCTGAGCTTACAAGGCTCGTAGATTGTGTG 975
Query 913 GAAAGATGGATTCTTGATGGCGTTGACACACTAGGAGATATATCGCGAACTGTCTTCAAA 972
|||||||||| || ||||||| || ||||||||| |||||||||||||| | ||||||||
Sbjct 976 GAAAGATGGAATCATGATGGCATTCACACACTAGAAGATATATCGCGAATTATCTTCAAA 1035
Query 973 CTTATGTTGGATGTTTTCGACGAGATCGAAAGAGGAGTGAGGTCTAAAGGAAGCTCTTTC 1032
||| |||||||||||||||||| |||| |||||||||||||||||||||| | || | |
Sbjct 1036 CTTGCGTTGGATGTTTTCGACGATATCGGAAGAGGAGTGAGGTCTAAAGGATGTTCCTAC 1095
Query 1033 CACTTGAAGGAGATGTTAGAAGAGCTCAAGACACTCGTGAGAGCAAATCTTGATCTTGTC 1092
|||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||
Sbjct 1096 TACTTGAAGGAGATGTTAGAAGAGCTCAAGATACTTGTGAGAGCAAACCTTGATCTTGTC 1155
Query 1093 AAATGGGCACGAGGAAAGCAGGTGCCTAGCTTTGAAGAACATGTAGAGGTAGGTGGAATA 1152
||||||||||||||||| ||| |||||||||| ||||||||||||||||| ||||| |||
Sbjct 1156 AAATGGGCACGAGGAAATCAGCTGCCTAGCTTCGAAGAACATGTAGAGGTTGGTGGGATA 1215
Query 1153 GCACTTACCTCATATGCAACGTTAATGTATTCTTTTGTCGGAATGGGAGAGACTGTCGGG 1212
||||||||| ||||||||||||||||||| |||||||| |||||||||||| ||||||||
Sbjct 1216 GCACTTACCACATATGCAACGTTAATGTACTCTTTTGTTGGAATGGGAGAGGCTGTCGGG 1275
Query 1213 AAGGAAGCTTACGAGTGG 1230
||||||||||| ||||||
Sbjct 1276 AAGGAAGCTTATGAGTGG 1293
Score = 374 bits (202), Expect = 2e-102
Identities = 266/297 (90%), Gaps = 4/297 (1%)
Strand=Plus/Plus
Query 1233 CGACATGAGTAACGGGTTTGCTGCAAATGCGATCAACTATTATATGAAGCAATTTGTAGT 1292
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1371 CGACATGAGTAATGGGTTTGCTGCAAATGCGATCAACTATTATATGAAGCAATTCGTAGT 1430
Query 1293 TACCAAAGAAGGGGCTATTCTAGAGTGTCAAAAAATGATCGCAAATATCAATAAGATCA- 1351
||||||||||| |||||||||||||||||||||||| ||| | | ||||||||||| |
Sbjct 1431 TACCAAAGAAGAAGCTATTCTAGAGTGTCAAAAAATGGTCGTAGACATCAATAAGAT-AG 1489
Query 1352 TAAATGAAGAGCTACTTAAGACAACTGCCGTGTCACCTCGTGTTCTCAAGCAAGCACTCA 1411
||||||| |||||||| || ||||| ||||| ||| ||| |||||||||||||| ||||
Sbjct 1490 TAAATGAGGAGCTACTAAAAACAACCACCGTGCCACGTCGAGTTCTCAAGCAAGCCCTCA 1549
Query 1412 ATTTTAGACGCTTATTGGAAGTCCTTTACACCAAGTCCGATGATATATTCAATTGTAGTG 1471
||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct 1550 ATTTTGGACGCTTATTGGAAGTCCTCTACACCAAGTCCGATGATATATACAATTGTAGTG 1609
Query 1472 AAGGAAAACTCAAGGAATATATAGTAACTCTG-CTCATAGATCCAATACGTCTTTGA 1527
|||||||| | ||||| |||||||| || || ||||||||||| |||| |||||||
Sbjct 1610 AAGGAAAATTGAAGGAGTATATAGTCAC-CTTACTCATAGATCCCATACATCTTTGA 1665
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 75351018045
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5