BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg333008
Length=1257
Score E
Sequences producing significant alignments: (Bits) Value
AT4G13210.2 | Symbols: | Pectin lyase-like superfamily protein... 1908 0.0
AT3G24670.1 | Symbols: | Pectin lyase-like superfamily protein... 1026 0.0
AT5G48900.1 | Symbols: | Pectin lyase-like superfamily protein... 669 0.0
AT3G24230.1 | Symbols: | Pectate lyase family protein | chr3:8... 309 4e-83
> AT4G13210.2 | Symbols: | Pectin lyase-like superfamily protein
| chr4:7669948-7673376 FORWARD LENGTH=1650
Length=1650
Score = 1908 bits (1033), Expect = 0.0
Identities = 1132/1181 (96%), Gaps = 2/1181 (0%)
Strand=Plus/Plus
Query 78 TTTATCAGACGGTGAATGGCATGAACACGCCGTTAAAGACCCAGAAGAAATAGCAGCACT 137
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 230 TTTATCAGACGGTGAATGGCATGAACACGCCGTTAAAGACCCAGAAGAAATAGCAGCAAT 289
Query 138 GGTCGATATGAGTATACGTAACAGTACGTATCGTAGAAAGCTAGGGTTCTTCTCCTCTTG 197
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 290 GGTCGATATGAGCATACGTAACAGTACGTATCGTAGAAAGCTAGGGTTCTTCTCCTCATG 349
Query 198 CGAAACTGGAAACCCAATCGATGATTGTTGGCGATGCGATAAAAAATGGCATCGCCGGAG 257
| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 350 CTCAACAGGAAACCCAATAGATGATTGTTGGCGATGCGATAAAAAATGGCATCGCCGAAG 409
Query 258 AAAACGATTAGCGGGTTGCGCGATTGGTTTCGGACGTAACGCAGTTGGAGGCCGTGATGG 317
||| |||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 410 AAAGCGATTAGCGGATTGCGCGATCGGTTTCGGACGTAACGCAGTCGGAGGCCGTGATGG 469
Query 318 ACGTTACTACATTGTTACTGATCCATCTGATCATGACCCGGTTAAC-CCAAAACCCGGTA 376
|||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||
Sbjct 470 ACGTTACTACATTGTTACTGATCCATCTGATCATGATCCGGTT-ACACCAAAACCCGGTA 528
Query 377 CACTCCGGTACGCTGTGATACAAGACGAACCGCTATGGATCGTATTTAAACGTGACATGG 436
|||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct 529 CACTCCGGTACGCTGTTATACAAGACGAACCGCTATGGATCGTCTTTAAACGTGACATGG 588
Query 437 TCATTACTTTAAGCCAAGAACTAATCATGAATAGCTTCAAAACGATTGATGGTCGTGGCG 496
||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |
Sbjct 589 TCATTACTTTAAGCCAAGAACTAATCATGAATAGCTTCAAAACTATCGATGGTCGTGGTG 648
Query 497 TGAACGTACATATAGCTGGTGGTGCATGTATCACGATTCAGTACGTTACGAATATTATCA 556
| ||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct 649 TCAACGTGCATATAGCTGGTGGTGCATGTCTCACGGTTCAGTACGTTACGAATATTATCA 708
Query 557 TCCATGGGATTAATATTCACGATTGTAAGCGAACTGGTAACGCTATGGTTCGGAGTTCGG 616
|||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct 709 TCCATGGGATAAATATTCATGATTGTAAGCGAACTGGTAACGCTATGGTTAGGAGTTCGG 768
Query 617 AGAGTCATTATGGTTGGAGAACTATGGCTGATGGTGATGGGATATCGATTTTTGGATCGA 676
|||||||||||||||||||||| ||||| ||||||||||| || |||||||||||||| |
Sbjct 769 AGAGTCATTATGGTTGGAGAACGATGGCGGATGGTGATGGTATTTCGATTTTTGGATCTA 828
Query 677 GTCATATTTGGATTGATCATAATTCTCTTTCGAATTGTGCTGATGGATTGATAGATGCAA 736
||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct 829 GTCATATTTGGATTGATCATAATTCTCTTTCGAGTTGTGCTGATGGATTGATAGACGCAA 888
Query 737 TTATGGGATCTACTGCTATTACCATCTCTAATAATTATCTCACTCACCACAATGAGGCTA 796
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 889 TTATGGGATCTACTGCTATTACCATCTCTAATAATTATCTCACTCACCACAACGAGGCTA 948
Query 797 TTTTGTTGGGGCATACCGATTCATACACCAGAGACAAAATGATGCAAGTAACCATTGCAT 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 949 TTTTGTTGGGGCATACCGATTCATACACCAGAGACAAAATGATGCAAGTAACCATTGCAT 1008
Query 857 ACAACCATTTTGGAGAGGGTCTTGTACAGAGAATGCCAAGGTGCAGGCATGGATACTTCC 916
|||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |
Sbjct 1009 ACAACCATTTTGGAGAAGGTCTTATACAGAGAATGCCAAGGTGCAGGCATGGATACTTTC 1068
Query 917 ATGTAGTAAACAACGATTACACTCACTGGGTAATGTATGCAATTGGTGGAAGTGCTAATC 976
| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct 1069 ACGTAGTAAACAATGATTACACTCACTGGGAAATGTATGCAATTGGTGGAAGTGCTAACC 1128
Query 977 CTACCATCAATAGTCAAGGAAACCGGTTCCTTGCCCCGGGAAACCGTTTCGCTAAGGAGG 1036
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1129 CTACCATCAATAGTCAAGGAAACCGGTTCCTTGCCCCGGGAAACCGTTTCGCCAAGGAGG 1188
Query 1037 TGACGAAACGGGTAGGTGCAGGGGAAGGAGAATGGAACAATTGGAACTGGAGATCCCAAG 1096
||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct 1189 TGACGAAACGGGTAGGTGCAGGGAAAGGAGAATGGAACAATTGGAATTGGAGATCCCAAG 1248
Query 1097 GAGACTTAATGCTCAATGGTGCCTACTTTACTTCATCTGGAGCTGGAGCTTCTGCAAATT 1156
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1249 GAGACTTAATGCTAAATGGTGCCTACTTTACTTCATCTGGAGCTGGAGCTTCTGCAAATT 1308
Query 1157 ACGCCAGAGCCTCTAGTTTGGCTGCTAAATCATCTTCCCTTGTAGGTATGCTTACCTCTA 1216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1309 ACGCCAGAGCCTCTAGTTTGGCTGCTAAATCATCTTCCCTTGTAGGTATGCTTACCTCTA 1368
Query 1217 GCTCAGGTGCTTTCAAATGCAGGATCGGTACGCTTTGTTAA 1257
|||| |||||||| ||||||||||||||||| |||||||||
Sbjct 1369 GCTCGGGTGCTTTGAAATGCAGGATCGGTACACTTTGTTAA 1409
Score = 117 bits (63), Expect = 3e-25
Identities = 71/75 (95%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 1 ATGGTGGTCGCTAGCACATTGTTCTCAATCTCAGCAACTCTAATCATAATTCTAGCACTC 60
|||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct 93 ATGGTGGTCGCTAGAACATTGTTCTCAATCTCAGCAACTCTAATCATTTTTCTAGCACTC 152
Query 61 TTTTTCCATGTAAAT 75
||| |||||||||||
Sbjct 153 TTTCTCCATGTAAAT 167
> AT3G24670.1 | Symbols: | Pectin lyase-like superfamily protein
| chr3:9005939-9008801 REVERSE LENGTH=1589
Length=1589
Score = 1026 bits (555), Expect = 0.0
Identities = 985/1190 (83%), Gaps = 39/1190 (3%)
Strand=Plus/Plus
Query 85 GACGGTGAATGGCATGAACACGCCGTTAAAGACCCAGAAGAAATAGCAGCACTGGTCGAT 144
||||||| |||| |||||||||| |||||| ||||||||||| |||| ||| ||||||||
Sbjct 154 GACGGTGCATGGAATGAACACGCAGTTAAAAACCCAGAAGAAGTAGCTGCAATGGTCGAT 213
Query 145 ATGAGTAT-ACGTAACAGTAC-GTATCGTAGAAAGCTAGGGTTCTTCTCCTCTTGCGAAA 202
|||| || | | |||||||| | | || || | | |||| ||| | | ||| |||| |
Sbjct 214 ATGAAAATAAAG-AACAGTACAG-AGCGGAGGAGGTTAGGATTC-T-T-CTCATGCGCCA 268
Query 203 CTGGAAACCCAATCGATGATTGTTGGCGATGCGATAAAAAATGGCATCGCCGGA-GAAAA 261
| ||||||||||| || || |||||| |||| ||| || ||||||| || || ||||
Sbjct 269 CCGGAAACCCAATAGACGACTGTTGGAGATGTGATCGGAATTGGCATCTCC-GACGAAAG 327
Query 262 CGAT-TAGCGGGTTGCGCGATTGGTTTCGGACGTAACGC-AGTTGGAGGCCGTGATGGAC 319
|| | | ||| ||||||||| || ||||| |||||||| | | ||||| || ||||| |
Sbjct 328 CG-TCTCGCGAATTGCGCGATCGGATTCGGTCGTAACGCTA-TCGGAGGACGAGATGGTC 385
Query 320 GTTACTACATTGTTACTGATCCATCTGATCATGACCCGGTTAACCCAAAACCCGGTACAC 379
|||||||| | || || ||||||||||| || ||| ||||||| ||| ||| || ||||
Sbjct 386 GTTACTACGTAGTCACAGATCCATCTGACCACGACGCGGTTAATCCACGACCAGGAACAC 445
Query 380 TCCGGT-ACGCTGTGATACAAGA-CGAACCGCTATGGATCGTATTTAAACGTGACATGGT 437
||| || |||||||||||||||| || ||| |||||||||| || || || ||||||||
Sbjct 446 TCC-GTCACGCTGTGATACAAGACCG-TCCGTTATGGATCGTCTTCAAGCGAGACATGGT 503
Query 438 CATTACTTTAAGC-CAAGAACTAATCATGAATAGCTTCAAAACGATTGATGGTCGTGGCG 496
|||||| ||| | ||||| ||||||||||| ||||||||||| || ||||| | ||||
Sbjct 504 GATTACTCTAA-CTCAAGAGCTAATCATGAACAGCTTCAAAACAATCGATGGAAGAGGCG 562
Query 497 TGAACG-TACATATAGCTGGTGGTGCATGTATCACGATTCAGTACGTTACGAATATTATC 555
|||||| | || || || || ||||| ||||| ||||||||||| || ||||||||||||
Sbjct 563 TGAACGTTGCA-ATCGCAGGCGGTGCTTGTATTACGATTCAGTATGTGACGAATATTATC 621
Query 556 ATCCATGGGATTAATATTCACGATTGTAAG-CGAACTGGTAACGCTATGGTTCGGAGTTC 614
||||||||||||||| | || |||||| || |||||||||| ||||||||||| || ||
Sbjct 622 ATCCATGGGATTAATGTACATGATTGT-AGAAGAACTGGTAATGCTATGGTTCGAAGCTC 680
Query 615 GGAG-AGTCATTATGGTTGGAGAACTATGGCTGATGGTGATGGGATATCGATTTTTGGAT 673
| | | |||||||| ||||| |||||||| |||||||||| |||||||| |||||||
Sbjct 681 GCCGTCG-CATTATGGGTGGAGGACTATGGCGGATGGTGATGCTATATCGATATTTGGAT 739
Query 674 CGAGTCATATTTGGATTGATCATAATTCTCTT-TCGAATTGTGCTGATGGATTGATAGAT 732
||||||||||||||||||||||||| ||| || || |||||||||||||| ||||| |||
Sbjct 740 CGAGTCATATTTGGATTGATCATAACTCT-TTGTCTAATTGTGCTGATGGTTTGATTGAT 798
Query 733 GCAATTATGGGATCTACTGCTATTACCATCTCTAATAATTATC-TCACTCACCACAATGA 791
|| ||||||||||||||||||||||| ||||| ||||| || | | ||||||||||| ||
Sbjct 799 GCTATTATGGGATCTACTGCTATTACTATCTCCAATAACTA-CATGACTCACCACAACGA 857
Query 792 GGCTATTTTGTTGGGGCATACCGATTCATACACCAGAGACAAAATGATGCAAGTAACCAT 851
|| ||| ||| ||||||||| ||||| ||||| |||||||| |||||||||| || ||
Sbjct 858 GGTTATGTTGATGGGGCATAGTGATTCGTACACTAGAGACAAGTTGATGCAAGTGACAAT 917
Query 852 TGCATACAACCATTTTGGAGA-GGGTCTTGTACAGAGAATGCCAAGGTGCAGGCATGGAT 910
||||| ||||||||||| || ||| ||| ||||||||||||| ||||| || ||||| |
Sbjct 918 AGCATATAACCATTTTGGGGAAGGG-CTTATACAGAGAATGCCGAGGTGTAGACATGGTT 976
Query 911 ACTTCCATGTAGTAAACAACGATTACACTCACTGGGTAATGTATGCAATTGGTGGAAGTG 970
| |||||||| |||||||| ||||| ||||| ||||||||||||||||||||||||||||
Sbjct 977 ATTTCCATGTTGTAAACAATGATTATACTCATTGGGTAATGTATGCAATTGGTGGAAGTG 1036
Query 971 CTAATCCTACCATCAATAGTCAAGGAAACCGGTTCCTTGCCCCGGGAAACCGTTTCGCTA 1030
|||| ||||| |||||||||||||| || || |||||||||||||| |||| |||||| |
Sbjct 1037 CTAACCCTACTATCAATAGTCAAGGCAATCGTTTCCTTGCCCCGGGCAACCCTTTCGCCA 1096
Query 1031 AGGAGGTGACGAA-ACGGGTAGGTGCAGGGGAAGGAGAATGGAA-CAATTGGAACTGGAG 1088
| |||||||| || | |||||||| || || |||| |||||||| |||| ||||||||||
Sbjct 1097 AAGAGGTGACAAAGA-GGGTAGGTTCATGGCAAGGGGAATGGAAGCAAT-GGAACTGGAG 1154
Query 1089 ATCCCAAGGAGACTTAATGCTCAATGGTGCCTACTTTACTTCATCTGGAGCTGGAGCTTC 1148
||| ||||||||| |||||||||| ||||||||||| ||| ||||||||||| ||| |
Sbjct 1155 ATCTCAAGGAGACCTAATGCTCAACGGTGCCTACTTCACTAAATCTGGAGCTGCTGCTCC 1214
Query 1149 TGCAAATTACGCCAGAGCCTCTAGTTTGGCTGCTAAATCATCTTCCCTTGTAGGTATGCT 1208
||||| || |||||||||||||| |||| |||||| || |||| | ||| |||||||
Sbjct 1215 TGCAAGCTATGCCAGAGCCTCTAGCTTGGGAGCTAAACCAGCTTCTGTAGTAAGTATGCT 1274
Query 1209 TACCT-CTAGCTCAGGTGCT-TTCAAATGCAGGATCGGTACGCTTTGTTA 1256
||||| | ||||| ||||| || |||||||||||||||| || |||||
Sbjct 1275 TACCTAC-AGCTCCGGTGCCCTT-AAATGCAGGATCGGTATGCGGTGTTA 1322
> AT5G48900.1 | Symbols: | Pectin lyase-like superfamily protein
| chr5:19825137-19829092 FORWARD LENGTH=1540
Length=1540
Score = 669 bits (362), Expect = 0.0
Identities = 819/1035 (79%), Gaps = 50/1035 (5%)
Strand=Plus/Plus
Query 93 ATGGCATGAACACGCCGTTAAAG-ACCCAGAAGAAATAGCAG-CACTGGTCGATATGAGT 150
|||||||||||| || ||| || | ||||| ||| |||| | || |||| || |||||
Sbjct 196 ATGGCATGAACATGCAGTT-GAGAATCCAGAGGAAGTAGCTGCCA-TGGTGGACATGAGC 253
Query 151 ATACGTAACAGTACGTATCGTAG-A-AAG-CTAGGGTTCTTCTCCTCTTGCGAAACTGGA 207
|| || ||||| || | || || | ||| |||| | | | | ||| ||| ||| |||
Sbjct 254 ATTCGAAACAGCAC--AGCG-AGAAGAAGATTAGGATAC-T-T-CTCATGCTCAACCGGA 307
Query 208 AACCCAATCGATGATTGTTGGCGATGCGATAAAAAATGGC-ATCGCCGGAGAAAACGAT- 265
|| |||||||||||||||||||| || || | ||||| ||| |||| |||||| ||
Sbjct 308 AATCCAATCGATGATTGTTGGCGTTGTGACCGGAGATGGCAATC-CCGGCGAAAAC-ATC 365
Query 266 TAGCGGGTTGCGCGATTGGTTTCGGACGTAACGCAGTTGGAGGCCGTGATGGACGTTACT 325
|||| |||||| || || ||||| || || ||| | || || | || || |||||||
Sbjct 366 TAGCCAATTGCGCAATCGGGTTCGGTCGCAATGCAATCGGCGGTAGAGACGGTCGTTACT 425
Query 326 ACATTGTTACTGATCC-ATCTGATC-ATGACCCGGTTAACCCAAAACCCGGTACACTCCG 383
|| | || | |||||| | | || | || ||||||||||||| ||||| || ||| | |
Sbjct 426 ACGTAGTGAGTGATCCAAAC-GA-CGATAACCCGGTTAACCCTAAACCGGGAACATTAC- 482
Query 384 GT-ACGCTGTGATACAAGACGAACCGCTATGGATCGTATTTAAACGTGACATGGTCATTA 442
|| |||| || || ||||| ||||| |||||||||| |||||||||||||||||||| |
Sbjct 483 GTCACGCAGTAATTCAAGAAGAACCATTATGGATCGTCTTTAAACGTGACATGGTCATAA 542
Query 443 CTTTAAGCCAAGAACTAATCATGAATAGCTTCAAAACGATTGATGGTCGTGGCGTGAACG 502
| |||| |||||||||||||||| || |||||||| || |||||||||||||| ||||
Sbjct 543 CATTAAAAGAAGAACTAATCATGAACAGTTTCAAAACAATCGATGGTCGTGGCGTCAACG 602
Query 503 TACATATAGCTGGTGGTGCATGTATCACGATTCAGTACGTTACGAATATTATCATCCATG 562
| || |||||| ||||||||| ||||||||||||| ||| || || |||||||| ||||
Sbjct 603 TTCACATAGCTAATGGTGCATGCATCACGATTCAGTTCGTGACTAACATTATCATTCATG 662
Query 563 GGATTA-ATATTCACGATTGTAAG-CGAACTGGTAACGCTATGGTTCGGAG-T-TCGGAG 618
||| || ||||||| |||||| || | ||||||||||||||||||| | || | ||
Sbjct 663 GGA-TACATATTCATGATTGT-AGACCAACTGGTAACGCTATGGTTAGAAGCTCTC-CTT 719
Query 619 AGTCATTATGGTTGGAGAACTATGGCTGATGGTGATGGGATATCGATTTTTGGATCGAGT 678
| ||||||||||||||||||||||||||||| |||||||| |||||||| || ||||||
Sbjct 720 CG-CATTATGGTTGGAGAACTATGGCTGATGGAGATGGGATTTCGATTTTCGGGTCGAGT 778
Query 679 CATATTTGGATTGATCATAATTCTCTTTCGAATTGTGCTGATGGA-TTGATAGATGCAAT 737
||||||||||||||||||||||| |||||||||||||||||||| || || ||||| |
Sbjct 779 CATATTTGGATTGATCATAATTCGCTTTCGAATTGTGCTGATGGGCTT-ATTGATGCTGT 837
Query 738 TATGGGATCTACTGCTATTACCATCTCTAATAATTATCT-CACTCACCACAATGAGGCTA 796
||||| |||||||||||||| ||||| |||||||| || ||| ||||||||||||| ||
Sbjct 838 TATGGCTTCTACTGCTATTACTATCTCCAATAATTA-CTTCACACACCACAATGAGGTTA 896
Query 797 TTTTGTTGGGGCATACCGATTCATACACCAGAGACAAAATGATGCAAGTAACCATTGCAT 856
| || ||||| |||| ||| | || || || || || | |||||||| || || || |
Sbjct 897 TGTTATTGGGACATAGTGATACCTATACAAGGGATAAGGTTATGCAAGTTACAATAGCTT 956
Query 857 ACAACCATTTTGGAGAGGGTCTTGTACAGAGAATGCCAAGGTGCAGGCATGGATACTTCC 916
| || |||||||| || |||||| | ||||||||||| ||||| ||||||||||| || |
Sbjct 957 ATAATCATTTTGGTGAAGGTCTTATTCAGAGAATGCCGAGGTGTAGGCATGGATATTTTC 1016
Query 917 ATGTAGTAAACAACGATTACACTCACTGGGTAATGTATGCAATTGGTGGAAGTGCTAATC 976
||||||| ||||| || || || || |||| ||||||||| || ||||| ||||| | ||
Sbjct 1017 ATGTAGTTAACAATGACTATACACATTGGGAAATGTATGCGATCGGTGGCAGTGCGAGTC 1076
Query 977 CTACCATCAATAGTCAAGGAAACCGGT-TCCTTGCCCCGGGAAACCG-TTTCGCTAAGGA 1034
||||||| || || |||||||| | | || | ||||| ||||||| ||| ||||| ||
Sbjct 1077 CTACCATTAACAGCCAAGGAAATAGATATC-TCGCCCCAAGAAACCGGTTT-GCTAAAGA 1134
Query 1035 GGTGACGAAACGGGTAGG-T--GCAGGGGAA-GGAGAATGGAA-CAATTGGAACTGGAGA 1089
|||||| ||| | | || | |||||| || || |||||| || |||||| ||||||
Sbjct 1135 GGTGAC-AAA-GAG-AGACTATGCAGGGCAATGGC-AATGGAGGCA-TTGGAATTGGAGA 1189
Query 1090 TCCCAAGGAGA-CTT 1103
|| ||||||| |||
Sbjct 1190 TCAGAAGGAGATCTT 1204
> AT3G24230.1 | Symbols: | Pectate lyase family protein | chr3:8774616-8777407
FORWARD LENGTH=1481
Length=1481
Score = 309 bits (167), Expect = 4e-83
Identities = 596/800 (75%), Gaps = 42/800 (5%)
Strand=Plus/Plus
Query 266 TAGCGGGTTGCGCGATTGGTTTCGGACGTAACGCAG-TTGGAGGCCGTGATGGACGTTAC 324
|||||| ||| | ||| ||||| ||| |||| || | |||| || ||| ||||| |||||
Sbjct 389 TAGCGGATTGTGGGATGGGTTTTGGAAGTAAAGC-GTTTGGTGGTCGTAATGGAAGTTAC 447
Query 325 TACATTGTTACTGATCCAT-CTGATCATGACCCGGTTAACCCAAAACCCGGTACACTCCG 383
|| | || ||||| |||| |||| ||||| || || ||||| || || || | |
Sbjct 448 TATGTGGTCACTGA-CCATAGTGATGATGACGTTGTGAATCCAAAGCCAGGAACTTTAC- 505
Query 384 GT-ACGCTGTGATACAAGACGAACCGCTATGGATCGTATTTAAACGTGACATGGTCAT-T 441
|| | || ||||| || | ||||| |||||||| | |||||| | |||||||| ||
Sbjct 506 GTCATGCCGTGATCCAGGTTGAACCATTATGGATCATCTTTAAAAGAGACATGGTGATAA 565
Query 442 ACTTTAAGCCAAGAACTAATCATGAATAGCTTCAAAACGATTGATGGTCGTGGCGTGAAC 501
| || || |||||||| |||||||| || |||||||| ||||||| |||||| | ||
Sbjct 566 AGTTGAA-ACAAGAACTGATCATGAACAGTTTCAAAACCATTGATGCTCGTGGTGCCAAT 624
Query 502 GTACATATAGCTGGTGGTGCATGTATCACGATTCAGTACGTTACGAATATTATCATCCAT 561
|| || || || |||||| || || || || || | | || ||| ||||| | |||
Sbjct 625 GTCCACATTGCCAATGGTGCTTGCATAACAATCCAAAATATAACCAATGTTATCGTTCAT 684
Query 562 GGGATT-AATATTCACGATTGTAAGCGAACTGGTAACGCT-A-TGGTTC-GGAGTTCG-G 616
|| || | ||||||||||| ||| |||| || || | | | | | || | || |||
Sbjct 685 -GGCTTGCACATTCACGATTGCAAGAGAACCGGGAATG-TAACT-G-TCAGAAGCTCGCC 740
Query 617 AGAGTCA-TTATGG-TT-GGAGAACTATGGCTGATGGTGATGGGATATCGAT-T-TTTGG 671
| ||||| || || || |||| ||||||||||||| | ||| || | |||||
Sbjct 741 A-AGTCAGGCCGGGTTTAGGGGAAC---GGCTGATGGTGAT--GCTATTAATATATTTGG 794
Query 672 ATCGAGTCATATTTGGATTGATCATAATTCTCTTTCGAATTGTGCTGATGG-ATTGATAG 730
|| |||||||||||||| || || || || || || || ||| ||||||| ||| | |
Sbjct 795 GTCAAGTCATATTTGGATCGACCACAACTCGCTCTCTAACTGTACTGATGGTCTTG-TTG 853
Query 731 ATGCAATTATGGGATCTACTGCTATTACCATCTCTAATAATTATCTCACTCACCACAATG 790
||| | | || || ||||| |||||||| || ||||| || ||||||||||| |||
Sbjct 854 ATGTTGTAAACGGTTCCACTGCCATTACCATTTCCAATAACCATTTCACTCACCACGATG 913
Query 791 AGGCT-ATTTTGTTGGGGCATACCGATTCATACACCA-GAGACAAAATGATGCAAGTAAC 848
||| | || ||| | ||||| | ||||| |||| || ||||||| ||||||||||| |
Sbjct 914 AGG-TGATGTTGCTAGGGCACAATGATTCGTACA-CACGAGACAAGATGATGCAAGTGA- 970
Query 849 CA-TTGCATACAACCATTTTGGAG-AGGGTCTTGTACAGAGAATGCCAAGGTGCAGGCAT 906
|| |||| || ||||||||||||| |||| || ||||||||||||||||||||||||||
Sbjct 971 CAGTTGCGTATAACCATTTTGGAGAAGGG-CTCATACAGAGAATGCCAAGGTGCAGGCAT 1029
Query 907 GGATACTTCCATGTAGTAAACAACGATTACACTCACTGGGTAATGTATGCAATTGGTGGA 966
|| || |||||||| || |||||||||||||| || ||| ||||||||| ||||| |||
Sbjct 1030 GGTTATTTCCATGTGGTTAACAACGATTACACACATTGGAAAATGTATGCTATTGGAGGA 1089
Query 967 AGTGCTAATCCTACCATCAATAGTCAAGGAAACCGGTTC-CTTGC-CCCGGGAAACCGTT 1024
||||| || || || || || |||||||| || | || || || ||| ||||| |
Sbjct 1090 AGTGCAAACCCAACGATAAACAGTCAAGGCAATAGATTTGCT-GCTCCCAA-AAACCACT 1147
Query 1025 TCGCTAAGGAGGTGACGAAA 1044
||| ||||||||||| |||
Sbjct 1148 CCGCCAAGGAGGTGACAAAA 1167
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 61796870895
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5