BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg333029 Length=1104 Score E Sequences producing significant alignments: (Bits) Value AT4G13050.1 | Symbols: | Acyl-ACP thioesterase | chr4:7617561-... 1779 0.0 AT3G25110.1 | Symbols: AtFaTA, FaTA | fatA acyl-ACP thioesteras... 769 0.0 > AT4G13050.1 | Symbols: | Acyl-ACP thioesterase | chr4:7617561-7619616 FORWARD LENGTH=1543 Length=1543 Score = 1779 bits (963), Expect = 0.0 Identities = 1058/1105 (96%), Gaps = 2/1105 (0%) Strand=Plus/Plus Query 1 ATGTTGAAGCTTTCGTGTAATGTAACTGACCACGTACACAACTTTTTCTCCGATTCTCGC 60 |||||||||||||||||||||||||||||||| |||||||| |||||||| | |||||| Sbjct 179 ATGTTGAAGCTTTCGTGTAATGTAACTGACCATATACACAACCTTTTCTCCAACTCTCGC 238 Query 61 CGGATTTTTGTTCCGGTGCATCGCCGTACCGGACCCATCTCTTGTTTTCAGTTAAAGAAG 120 ||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||| Sbjct 239 CGGATTTTTGTTCCGGTGCATCGGCAAACCAGACCCATCTCTTGTTTTCAGTTAAAGAAG 298 Query 121 GAACCTTTACGGGCAATTCTCTCTGCTGATCATGGAAACAGCAGCCTCCGTGTTGCTGAT 180 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 299 GAACCTTTACGGGCAATTCTCTCTGCTGATCATGGAAACAGCAGCGTCCGTGTTGCTGAT 358 Query 181 TCTGTTTCCGTTACTTCTCCGGCGGATCGTCTCCGATTTGGTCGATTGATGGCAGATGGG 240 ||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct 359 ACTGTTTCCGGTACTTCTCCGGCGGATCGTCTCCGGTTTGGTCGATTGATGGAAGATGGG 418 Query 241 TTTTCTTATAAGGAGAAGTTCATTGTTAGAAGCTATGAAGTTGGGATTAACAAAACTGCC 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 419 TTTTCTTATAAGGAGAAGTTCATTGTTAGAAGCTATGAAGTTGGGATTAACAAAACTGCC 478 Query 301 ACTGTTGAAACAATTGCTAATCTTTTGCAGGAAGTGGCATGTAATCATGTTCAGAAAGTT 360 || ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct 479 ACCATTGAAACAATTGCTAATCTCTTGCAGGAAGTGGCATGTAATCATGTTCAGAATGTT 538 Query 361 GGATTTTCGACTGATGGGTTTGCTACAACACTTACTATGAGGAAATTGCATCTCATTTGG 420 |||||||| |||||||| ||||||||||||||||| ||||||||||||||||| |||||| Sbjct 539 GGATTTTCTACTGATGGATTTGCTACAACACTTACCATGAGGAAATTGCATCTTATTTGG 598 Query 421 GTTACTGCAAGAATGCACATTGAGATTTACAAGTATCCAGCTTGGAGTGATGTGGTTGAG 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 599 GTTACTGCAAGAATGCACATTGAGATTTACAAGTATCCAGCTTGGAGTGATGTGGTTGAG 658 Query 481 ATTGAGACTTGGTGTCAGAGTGAAGGAAGGATTGGAACTAGACGTGATTGGATTTTGAAA 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 659 ATTGAGACTTGGTGTCAGAGTGAAGGAAGGATTGGAACTAGACGTGATTGGATTTT-AAA 717 Query 541 G-ATTGTGCGACCGGTGAAGTTATTGGACGTGCTACAAGCAAGTGGGTGATGATGAACCA 599 | ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 718 GGATTGTGCTACTGGTGAAGTTATTGGACGTGCTACAAGCAAGTGGGTGATGATGAACCA 777 Query 600 AGACACAAGGCGGCTTCAAAGAGTTACAGATGAAGTTCGGGACGAGTATTTGGTTTTCTG 659 ||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct 778 AGACACAAGGCGGCTTCAAAGGGTTACAGACGAAGTTCGGGACGAGTACTTGGTTTTCTG 837 Query 660 TCCTCGAGAGCCTAGACTAGCGTTTCCAGAGGAGAACAATAACAGCTTAAAGAAGATCCC 719 ||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct 838 TCCTCCAGAGCCTAGACTAGCGTTTCCAGAGGAGAACAATAGCAGCTTAAAGAAAATCCC 897 Query 720 GAAACTGGAAGATCCTGCTCAGTATTCTATGCTAGGGCTTAAGCCTAGACGAGCTGATCT 779 |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 898 GAAATTGGAAGATCCTGCTCAGTATTCTATGCTTGGGCTTAAGCCTAGACGAGCTGATCT 957 Query 780 AGACATGAACCAGCATGTGAATAATGTCACCTACATTGGATGGGTCCTTGAGAGCATACC 839 ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 958 TGACATGAACCAACATGTGAATAATGTTACCTACATTGGATGGGTCCTTGAGAGCATACC 1017 Query 840 GCAAGAAGTCATAGACACGCACGAGCTTAAAGTTATAACTCTAGATTACAGAAGAGAATG 899 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1018 GCAAGAAATCATAGACACGCACGAGCTTAAAGTTATAACTCTAGATTACAGAAGAGAATG 1077 Query 900 CCAGCAAGATGACATTGTAGATTCACTTACCACCTCTGAAACCCCCAATGAGGCGGTGTC 959 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct 1078 CCAGCAAGATGACATTGTAGATTCACTTACCACCTCTGAAACCCCCAATGAGGTGGTCTC 1137 Query 960 AAAGCTTACTGGGACCAACGGATCTACCACGTCAAGCAAACAAGAACACAATGAGAGCCA 1019 ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| || Sbjct 1138 AAAGCTTACTGGGACGAACGGATCTACCACGTCAAGCAAACGAGAACACAATGAGAGTCA 1197 Query 1020 ATTCTTGCATATCTTGAGGTTGTCAGAAAATGGACAGGAGATCAATCGTGGGAGAACCCA 1079 |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1198 CTTCTTGCATATCCTGAGGTTGTCAGAAAATGGTCAGGAGATCAATCGTGGGAGAACCCA 1257 Query 1080 ATGGCGAAAGAAGTCCTCAAGATGA 1104 ||||||||||||||| ||||||||| Sbjct 1258 ATGGCGAAAGAAGTCATCAAGATGA 1282 > AT3G25110.1 | Symbols: AtFaTA, FaTA | fatA acyl-ACP thioesterase | chr3:9146271-9148486 REVERSE LENGTH=1620 Length=1620 Score = 769 bits (416), Expect = 0.0 Identities = 754/912 (83%), Gaps = 44/912 (5%) Strand=Plus/Plus Query 202 GCGGATC-GTCTCCGATTTGGTCGATTGA-TGGCAGATGGGTTT-TCTTATAAGGAGAAG 258 ||||||| | |||||||| ||| | |||| | | |||| ||||| |||||||| |||||| Sbjct 418 GCGGATCAG-CTCCGATTAGGTAGTTTGACT-GAAGAT-GGTTTATCTTATAAAGAGAAG 474 Query 259 TTCATTGTTAGAAGC-TATGAAGTTGGG-ATTAACAAAACTGCCACTGTTGAAACAATTG 316 || ||||||| | | || |||| |||| | ||||||||| || ||||||||||| |||| Sbjct 475 TTTGTTGTTAG-ATCTTACGAAG-TGGGTAGTAACAAAACCGCTACTGTTGAAACCATTG 532 Query 317 CTAATCTTTTGCAGGAAGTGGCATGTAATCATGTTCAGAAA--GTTGGATTTTCGACTGA 374 |||||||||| ||||| |||| ||||||||||| || ||| ||||| ||||||||||| Sbjct 533 CTAATCTTTTACAGGAGGTGGGATGTAATCATG--CACAAAGTGTTGGTTTTTCGACTGA 590 Query 375 TGGGTTTGCTACAAC-ACTTACTATGAGGAAATTGCATCTCATTTGGGTTACTGCAAGAA 433 ||||||||| ||||| || |||||||||||| ||||||||||||||||||||||| |||| Sbjct 591 TGGGTTTGCAACAACAAC-TACTATGAGGAAGTTGCATCTCATTTGGGTTACTGCGAGAA 649 Query 434 TGCACATTGAGATTTACAAGTATCCAGCTTGGAGTGATGTGGTTGAGATTGAGACTTGGT 493 |||| || ||||| || ||||| || |||||| |||||||||||||||| |||||||||| Sbjct 650 TGCATATCGAGATCTATAAGTACCCTGCTTGGGGTGATGTGGTTGAGATAGAGACTTGGT 709 Query 494 GTCAGAGTGAAGGAAGGATTGGAACTAGACGTGATTGGATT-TTGAAAGATTGTG-CGAC 551 |||||||||||||||||||||| || || |||||||||||| || || |||| || | || Sbjct 710 GTCAGAGTGAAGGAAGGATTGGGACAAGGCGTGATTGGATTCTT-AAGGATTCTGTC-AC 767 Query 552 CGGTGAAGTTATTGGACGTGCTACAAGCAAGTGGGTGATGATGAACCAAGACACAAGGCG 611 |||||||| | ||| |||||||||||||||||||||||||||||||||||||| || || Sbjct 768 TGGTGAAGTCACTGGCCGTGCTACAAGCAAGTGGGTGATGATGAACCAAGACACGAGACG 827 Query 612 GCTTCA-AAGAGTTACAGATGAAGTTCGGGACGAGTATTTGGTTTTCTGTCCTCGAGAGC 670 |||||| || |||| | ||||| |||||||||||||| ||||| |||||||||| ||| | Sbjct 828 GCTTCAGAA-AGTTTCTGATGATGTTCGGGACGAGTACTTGGTCTTCTGTCCTCAAGAAC 886 Query 671 CTAGACTAGCGTTTCCAGAGGAGAACAATA-ACAGCTTAAAGAAGATCCCGAAACTGGAA 729 | || |||| ||||| || ||||| || | | ||||| ||||| ||||||||||| ||| Sbjct 887 CGAGGTTAGCATTTCCGGAAGAGAATAACAGA-AGCTTGAAGAAAATCCCGAAACTCGAA 945 Query 730 GATCCTGCTCAGTATTCTATGCTAGGGCTTAAGCCTAGACGAGCTGATCTAGACATGAAC 789 ||||| ||||||||||| ||| | |||||||||||||||||||||||||| ||||||||| Sbjct 946 GATCCGGCTCAGTATTCAATGATTGGGCTTAAGCCTAGACGAGCTGATCTCGACATGAAC 1005 Query 790 CAGCATGTGAATAATGTCACCTACATTGGATGGGTCCTTGAGAGCATACCGCAAGAAGTC 849 |||||||| |||||||||||||| ||||||||||| || ||||||||||| |||||| | Sbjct 1006 CAGCATGTCAATAATGTCACCTATATTGGATGGGTTCTCGAGAGCATACCACAAGAAATT 1065 Query 850 ATAGACACGCACGAGCTTAAAGTTATAACTCTAGATTACAGAAGAGAATGCCAGCAAGAT 909 ||||||||||||||||| | || |||||||| ||||| ||||||||||| || ||||| Sbjct 1066 GTAGACACGCACGAGCTTCAGGTCATAACTCTGGATTATAGAAGAGAATGTCAACAAGAC 1125 Query 910 GACATTGTAGATTCACTTACCACCTCTGAAACCCCCAATGAGGCGGTGTCAAAGCTTACT 969 || | || |||||||| |||||| | || || | | || ||| || | Sbjct 1126 GATGTGGTGGATTCACTCACCACC----A--CCACC--T----C--TG--AAA--TTGGT 1167 Query 970 GGGACCAACGGATCTACCACGTCAAGCAAACAAGAACACAATGAGAGCCAATTCTTGCAT 1029 || ||||| || ||| ||||||| ||| ||| | ||||| || ||||| |||||||| Sbjct 1168 GGAACCAATGGCTCTGCCACGTCTGGCACACAGGGCCACAACGATAGCCAGTTCTTGCAC 1227 Query 1030 ATCTTGAGGTTGTCAGAAAATGGACAGGAGATCAATCGTGGGAGAACCCAATGGCGAAAG 1089 || |||||||||| | | |||| ||||||||||| || |||| ||| | ||| ||||| Sbjct 1228 CTCCTGAGGTTGTCTGGAGATGGTCAGGAGATCAACCGCGGGACAACTCTGTGGAGAAAG 1287 Query 1090 AAGTCCT-CAAG 1100 ||| ||| |||| Sbjct 1288 AAG-CCTTCAAG 1298 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 54116187510 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5