BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg333040 Length=1422 Score E Sequences producing significant alignments: (Bits) Value AT4G12910.1 | Symbols: scpl20 | serine carboxypeptidase-like 20... 2130 0.0 > AT4G12910.1 | Symbols: scpl20 | serine carboxypeptidase-like 20 | chr4:7550433-7553332 REVERSE LENGTH=1918 Length=1918 Score = 2130 bits (1153), Expect = 0.0 Identities = 1320/1401 (94%), Gaps = 10/1401 (1%) Strand=Plus/Plus Query 1 ATGGTTTGGTTAATGAAAGTTTTTGTCTTTGTGACATTAGTCTCTTTACTGTTTGTAATA 60 ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct 297 ATGGTTTGGTTAATGAAAGTTTTTGTCTTTGTGACATTACTCTCTTTAGTGTTTGTAATA 356 Query 61 ACAGAATCAGCTCCTGAATCTGCTCTTATTACCAAACTTCCTGGCTTCGAAGGCACTTTT 120 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct 357 ACAGAATCAGCTCCTGAATCTGCTCTTATCACCAAACTTCCTGGTTTCGAAGGCACTTTT 416 Query 121 CCTTCAAAACATTACTCCGGGTATGTGACTATTGATAAGGATCATGGAAAGAATCTGTGG 180 ||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||| ||| Sbjct 417 CCTTCGAAACATTACTCCGGGTATGTGACAATTGATAAGGAACATGGAAAGAATCTATGG 476 Query 181 TATTACTTTGTTGAATCGGAGAAGGATCCATCGAAAGATCCGGTCGTACTATGGCTCAAT 240 ||||||||| |||||||||||||| ||||||||||||||||||| || || ||||||||| Sbjct 477 TATTACTTTATTGAATCGGAGAAGAATCCATCGAAAGATCCGGTGGTGCTTTGGCTCAAT 536 Query 241 GGTGGTCCAGGTTGTTCAAGCATGGATGGATTCGTGTATGAGCATGGTCCATTCAATTTT 300 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 537 GGTGGTCCAGGTTGTTCAAGCATGGATGGATTTGTGTATGAGCATGGTCCATTCAATTTC 596 Query 301 GAACTACCAAAGAAAAACAATAGCCTCCCACACTTGCATCTTAATCCTTATAGTTGGTCC 360 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct 597 GAACTACCAAAGAAAAACAATAGTCTCCCACTCTTGCATCTTAATCCTTATAGTTGGTCC 656 Query 361 AAGGTATCTAACATTATATATCTTGATTCTCCTGTTGGTGTGGGATTCTCTTACTCAAAC 420 ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 657 AAGGTCTCTAACATTATATACCTTGATTCTCCTGTTGGTGTGGGATTCTCTTACTCAAAC 716 Query 421 AACATTTCTGATTACATAACCGGTGATACTAAAACCGCGGTTGACTCTCACGCGTTCCTT 480 || | |||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 717 AATAAGTCTGATTACATAACCGGTGATATTAAAACCGCGGTTGACTCTCACGCGTTCCTT 776 Query 481 CTCAAGTGGTTCCAAATGTTTCCTGAGTTTCAATCAAATCCATTTTTCATCTCTGGAGAA 540 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 777 CTCAAGTGGTTCCAAATGTTTCCTGAGTTTCAATCAAATCCTTTTTTCATCTCTGGAGAA 836 Query 541 TCTTACGCCGGAGTTTATGTCCCAACTCTTGCTTCAGAAGTTGTCAAAGGGATCAAGAAT 600 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||| Sbjct 837 TCTTACGCCGGAGTTTATGTCCCAACTCTTGCTTCAGAAGTTGTCATAGGGAACAAAAAT 896 Query 601 GGGGTAAAGCCGGCTCTTAACTTCAAGGGATATTTGGTTGGAAATGGAGTTGCGGATC-- 658 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 897 GGAGTAAAGCCGGCTCTTAACTTCAAGGGGTATTTGGTTGGAAATGGAGTTGCGGATCCG 956 Query 659 AAGTATTTGATGGAAATGCTCTCGTCCCGTTTGCTCACGGGATGGGACTAATATCTGATG 718 |||| || |||||||||||| | ||||||||||| || |||||||||||||| ||||||| Sbjct 957 AAGT-TT-GATGGAAATGCTTTTGTCCCGTTTGCACATGGGATGGGACTAATCTCTGATG 1014 Query 719 AACTCTTTGAGAACGTTACAAAAGCTTGCCATGGAAATTTCTATGAAATAGAGGGACTTG 778 ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| | Sbjct 1015 AACTCTTTGAGAACGTTACAAAAGCTTGCAAGGGAAATTTCTATGAAATAGAGGGACTCG 1074 Query 779 AGTGCGAGGAACAGTATACGAAAGTTT-CTGATGATACTGAA--AGGTTGAACATATACA 835 |||||||||||||||||||||||||| | ||||||||| || || ||||| ||||||| Sbjct 1075 AGTGCGAGGAACAGTATACGAAAGTTAAC-GATGATACT-AACCAG-TTGAATATATACA 1131 Query 836 ACATTCTTGAGCCATGTTACCACGGAACATCGCTATCTGCTTTCGACATTAGATCACTAC 895 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| || | Sbjct 1132 ACATTCTTGAGCCATGTTACCACGGAACATCGCTATCTGCATTCGACATTAGATCGCTTC 1191 Query 896 CTTCAAGTCTCCTTCAGCTAGGTAAAACCGAACGACCGTTAGCTATAAGAAAAAGAATGT 955 |||||||||||||||||||||| ||||| ||| || |||| |||||||||||||||||| Sbjct 1192 CTTCAAGTCTCCTTCAGCTAGGCAAAACTGAAAAACGGTTACCTATAAGAAAAAGAATGT 1251 Query 956 TTGGTCGAGCATGGCCAGTTCGTGCGCCTGTTCGTCCAGGCATTGTTCCTAGCTGGTCTC 1015 |||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct 1252 TTGGTCGAGCGTGGCCAGTTCGTGCGCCTGTTCATCCAGGCATTGTCCCTAGCTGGTCTC 1311 Query 1016 AACTCCTTGCTGACGTCTCTGTTCCTTGTATTGATGATAGAGTTGCAACAGCGTGGCTGA 1075 |||| ||||| |||||| |||||||||| ||||||||||||||||||||||||||| ||| Sbjct 1312 AACTTCTTGCCGACGTCACTGTTCCTTGCATTGATGATAGAGTTGCAACAGCGTGGTTGA 1371 Query 1076 ACGATCCAGCGATTAGGAAAGCTATTCATACTAAAGAGGAGAGTGAGATTGGAAGGTGGG 1135 ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1372 ACGATCCAGAGATTAGGAAAGCTATTCATACTAAAGAGGAGAGCGAGATTGGAAGGTGGG 1431 Query 1136 AACTCTGCAGTGGGAAACTCTCATTCGATCACGATGCAGGAAGCATGATCAAATTCCATA 1195 |||| ||||||||||||||||||||| ||||||| ||||||||||||||| | ||||||| Sbjct 1432 AACTTTGCAGTGGGAAACTCTCATTCTATCACGACGCAGGAAGCATGATCGATTTCCATA 1491 Query 1196 GAAACCTTACTCTAAGTGGATATAGAGCTCTTATTTACAGCGGGGATCACGATATGTGTG 1255 |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1492 GAAACCTTACACTAAGTGGATATAGAGCTCTCATTTACAGCGGGGATCACGATATGTGTG 1551 Query 1256 TTCCATATACTGGCTCTGAAGCTTGGACAAAATCTCTTGGATACAAAGTGATTGATGAAT 1315 |||| | ||||||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct 1552 TTCCGTTTACTGGCTCGGAAGCTTGGACAAAATCTCTTGGATACAAAGTTATTGATGAAT 1611 Query 1316 GGAGGGCATGGATATCAAACGACCAAGTCGCAGGGTATACGCAAGGATATGCAAACAATC 1375 ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct 1612 GGAGGGCATGGATATCAAATGACCAAGTCGCGGGGTATACGCAAGGATATGCAAACAATC 1671 Query 1376 TCACATTTTTAACCATCAAGG 1396 ||||||||||||||||||||| Sbjct 1672 TCACATTTTTAACCATCAAGG 1692 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 70079960820 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5