BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg333044

Length=423
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT4G12880.1 | Symbols: ENODL19, AtENODL19 | early nodulin-like ...   654    0.0  


> AT4G12880.1 | Symbols: ENODL19, AtENODL19 | early nodulin-like 
protein 19 | chr4:7544381-7545327 REVERSE LENGTH=718
Length=718

 Score =  654 bits (354),  Expect = 0.0
 Identities = 396/417 (95%), Gaps = 0/417 (0%)
 Strand=Plus/Plus

Query  1    ATGGCGAGATCTACGGTGCTTATCGCGGCGGTTGTACTGGCTTTTCTAGTGGCGGCGCCG  60
            |||| |||||||| |||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct  102  ATGGGGAGATCTATGGTGCTAATCTCGGCGGTTGTACTGGCTTTTCTAGTGGCGGCGCCG  161

Query  61   ATGCCGGAAGTAACAGCTAAGAAATATACAGTCGGCGACAAAAAGTTCTGGAACCCCAAC  120
            || || ||||||||||| |||||||||  |||||||||||||||||||||||||||||||
Sbjct  162  ATACCAGAAGTAACAGCCAAGAAATATTTAGTCGGCGACAAAAAGTTCTGGAACCCCAAC  221

Query  121  ATTAACTATACCATATGGGCTCAAGGCAAACATTTCTACGTCGGAGACTGGCTCTATTTT  180
            |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct  222  ATTAACTATACCCTATGGGCTCAAGGCAAACATTTCTACGTCGGAGACTGGCTTTATTTT  281

Query  181  GTGTTCTATAGAGACCAACACAACATTCTTGAGGTAAACAAGGCTGACTATGAAAGATGT  240
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct  282  GTGTTCTATAGAGACCAACACAACATTCTTGAGGTAAACAAGGCTGATTATGAAAAATGT  341

Query  241  ATCTCCAACCACCCAATACGCAATTATACACGTGGAGCTGGGAGAGACATTGTTCCTCTC  300
            |||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct  342  ATCTCCAACCGCCCAATACGTAATTATACACGTGGAGCTGGGAGAGATATTGTTCCTCTC  401

Query  301  TATGAGACTAGACGTTACTATCTACTTGATGGAAGAGGTGGTTGCTTTCACGGCATGAAG  360
            ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||
Sbjct  402  TATGAGACTAGACGTTATTATCTACTTGATGGAAGAGGTGGTTGCGTTCAAGGCATGAAG  461

Query  361  CTAGATGTTTTAGTTGAGActcctcctcctcctcctcctttcactcctcctccACCA  417
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct  462  CTAGATGTTTTAGTTGAGACTCCTCCTCCTCCTCCTCCTTTTACTCCTCCTCCTCCA  518



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 20056831851


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5