BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg333046

Length=459
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT4G12860.1 | Symbols: UNE14 | EF hand calcium-binding protein ...   804    0.0  


> AT4G12860.1 | Symbols: UNE14 | EF hand calcium-binding protein 
family | chr4:7538444-7538902 REVERSE LENGTH=459
Length=459

 Score =  804 bits (435),  Expect = 0.0
 Identities = 451/459 (98%), Gaps = 0/459 (0%)
 Strand=Plus/Plus

Query  1    ATGGATCGTGGAGAATTGAGTAGAGTGTTCCAAATGTTCGATAAGAATGGAGACGGGAAG  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1    ATGGATCGTGGAGAATTGAGTAGAGTGTTCCAAATGTTCGATAAGAATGGAGACGGGAAG  60

Query  61   ATTGCGAAAAACGAGCTGAAAGACTTCTTTAGAAGCGTGGGAATCATGGTCCCTGAAAAT  120
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct  61   ATTGCGAAAAACGAGCTGAAAGACTTCTTTAAAAGCGTGGGAATCATGGTCCCTGAAAAT  120

Query  121  GAAATCAATGAGATGATAGAAAAGATGGATGTGAATGGAGACGGGGTCATGGATATCGAT  180
            ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct  121  GAAATCAATGAGATGATAGCAAAGATGGATGTGAATGGAGACGGGGCCATGGATATCGAT  180

Query  181  GAGTTTGGATCATTGTATCAAGAAATGGTGGAAGAGAAAGAGGAAGAAGAGGATATGAGA  240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct  181  GAGTTTGGATCATTGTATCAAGAAATGGTGGAAGAGAAAGAGGAAGAAGAGGACATGAGA  240

Query  241  GAAGCCTTTAGAGTATTTGATCAGAATGGTGATGGTTTCATTACAGATGAAGAGCTGAGG  300
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct  241  GAAGCCTTTAGAGTATTTGATCAGAATGGTGATGGGTTCATTACAGATGAAGAGCTGAGG  300

Query  301  TCGGTGCTTGCGTCAATGGGGTTGAAGCAAGGAAGAACACTTGAAGATTGCAAGAAGATG  360
            |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct  301  TCGGTGCTCGCGTCAATGGGGTTGAAGCAAGGGAGAACACTTGAAGATTGCAAGAAGATG  360

Query  361  ATAAGTAAGGTTGATGTTGATGGAGATGGTATGGTTAATTTTAAGGAGTTCAAGCAAATG  420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct  361  ATAAGTAAGGTTGATGTTGATGGAGATGGTATGGTTAATTTTAAGGAGTTCAAACAAATG  420

Query  421  ATGAGAGGTGGTGGATTTGCTGCTCTTAGCTCCAATTAA  459
            |||||||||||||||||||||||||||||||||||||||
Sbjct  421  ATGAGAGGTGGTGGATTTGCTGCTCTTAGCTCCAATTAA  459



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 21866470815


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5