BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg333056
Length=2763
Score E
Sequences producing significant alignments: (Bits) Value
AT4G12780.1 | Symbols: | Chaperone DnaJ-domain superfamily pro... 3461 0.0
AT4G12770.1 | Symbols: | Chaperone DnaJ-domain superfamily pro... 2691 0.0
AT2G02890.1 | Symbols: | F-box family protein | chr2:843913-84... 185 2e-45
> AT4G12780.1 | Symbols: | Chaperone DnaJ-domain superfamily protein
| chr4:7512047-7517005 FORWARD LENGTH=3218
Length=3218
Score = 3461 bits (1874), Expect = 0.0
Identities = 2210/2367 (93%), Gaps = 43/2367 (2%)
Strand=Plus/Plus
Query 1 ATGGATGATTTCACAGGATTGTTAGCGAGAGACTTCGGTTTGAAACCTCAGGGCAAATCA 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 154 ATGGATGATTTCACAGGATTGTTAGCGAGAGACTTCGGATTGAAACCTCAGGGAAAATCA 213
Query 61 GCTCCCATGGCTG-CTCAATCGAACTCTTCTGCTTCTGATTTCAACAGTTTCGCTTCTTC 119
||||||||||| | ||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct 214 GCTCCCATGGC-GTCTCAATCGAACTCTTCTGCCGCTGATTTCAACACTTTCGCTTCTTC 272
Query 120 TTATAGCTTCGCCAACGCCGCCGGTAAAAAGTCGGAATCTTTGCCGGTGTTTGACGATCT 179
|||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||
Sbjct 273 TTATAGCTTCGCCACCGCCGCCGGTAAAAAGTCCGATTCTTTGCCGGTGTTTGACGATCC 332
Query 180 TGGTCGAGATGGTGATGATCTTCTCTTCAAAGATGTGTTTAGCGG---ACCACCACCAAA 236
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 333 TGGTCGAGATGGTGATGATCTTCTCTTCAAAGATGTGTTTAGTGGACCACCACCACCAAA 392
Query 237 GTACGGATCCTCTTCTGGGGATTCTCGTTCTCCACCTGCTTCTGCTTTTGACTATGATGC 296
||||||||| |||||||| ||||| ||||||||| ||||| |||||||||||||||||||
Sbjct 393 GTACGGATCTTCTTCTGGTGATTCACGTTCTCCATCTGCTCCTGCTTTTGACTATGATGC 452
Query 297 TATGTTCAAGGAACCCAAATCCAAACCGGCGTCGTCCATGCCGGTCTATGACAAGCCTGT 356
||||||||||||||||||||||||| | |||||||| |||||||| ||||||||||||||
Sbjct 453 TATGTTCAAGGAACCCAAATCCAAATCAGCGTCGTCTATGCCGGTTTATGACAAGCCTGT 512
Query 357 GTATGATGATGAGGATGTGTTTGAGTCTATTCCTGAGCTCAAAATCCCATCCACTTCTTC 416
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 513 GTATGATGATGAGGATGTGTTTGAGTCTATTCCTGAGCTCAAAATCCCTTCCACTTCTTC 572
Query 417 TCAATCTGCTAGGTTTGATG-ATG-TTT-TC-TC--T-TCA-C--CTCCT---AAGCACA 463
||| || ||||||||||| | ||| ||| || || | ||| | ||||| |||||||
Sbjct 573 TCAGTCAGCTAGGTTTGA-GAATGTTTTCTCTTCTATCTCATCTTCTCCTACGAAGCACA 631
Query 464 GGAAACAGAACAGTTCTCCTTTTGATGATCTCATGGGCAACAATTTGGGGAAGAGAGGGA 523
|||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||
Sbjct 632 GGAAACAGAACAGTTCTCCTTTCGATGATCTCATGGGAAACAATTTGGGGAAGAAAGGGG 691
Query 524 CAGAGAGTGACCGAGAGGAGAAGGCTAGCTCCATTTTTGATGACTTGATTCCCGGGTTTG 583
|||| ||||||||||||||||||| ||| |||||||||||||| |||||||| |||||||
Sbjct 692 CAGATAGTGACCGAGAGGAGAAGGGTAGTTCCATTTTTGATGATTTGATTCCTGGGTTTG 751
Query 584 GTCGCACTAGCTCTCCTCC-TCCTAAACGGAAAACTTCAGAGACAACAAATCAATCCCAG 642
||||||||||||||||||| | |||| |||| ||||||||||||||||||||||||| ||
Sbjct 752 GTCGCACTAGCTCTCCTCCAT-CTAAGCGGACAACTTCAGAGACAACAAATCAATCCGAG 810
Query 643 AAACCTCCGTATCGGACTGCCGAGACATCTTCCAATGTGGAAGAAGACCCATTTGTAGTC 702
||| |||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 811 AAAGCTCCATATCGAACTGCCGAGACATCTTCCAATGTGGAAGAAGACCCGTTTGTAGTC 870
Query 703 TTGGAGGAGTCTGCATCAACCCCTAGAGAACCTTCCACGGGAGGGTTCACTGATCCATTG 762
||||||||||||| |||||||||||||||||| ||| | | | ||||||||||||
Sbjct 871 TTGGAGGAGTCTGAATCAACCCCTAGAGAACCCTCC-C------G-T-ACTGATCCATTG 921
Query 763 GAGGATATTGGGAAATTCAACAGCAGAAAAACTGATCATTCATCTGTCCACAGAGGAGTG 822
|| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 922 GACGATATTGGTAAATTCAACAGCAGAAAAACTGATCATTCATCTGTCCACGGAGGAGTA 981
Query 823 TTTGTTGATATTGACCCTCTCGATAGTCTTGGAAAATCAGGGCCGGATATGAATAATAGA 882
|||||||||||||||||||| |||| ||| |||||| |||||||||||||||||| || |
Sbjct 982 TTTGTTGATATTGACCCTCTTGATAATCTAGGAAAACCAGGGCCGGATATGAATAGTAAA 1041
Query 883 GGCAAAAGTCATTTAAGACCACCAGGAAACATCAGTGGCTCCCAGTCACCACCAGTAGAA 942
|| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1042 GGGAAGAGTCATTTAAGACCACCAGGAAACATCAGTGGCTCCCAGTCACCACCAGTAGAA 1101
Query 943 AGTCCTGGGAGTTACCATTCGAAGAAAGTTTCATTTGATGATGTTTTAGAGCCACAGAAT 1002
|| ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||
Sbjct 1102 AGCCCTGGGAGTTACCATTCTAAGAAAGTTTCATTTGAAGATTTTTTAGAGCCACATAAT 1161
Query 1003 ACGAGTACTCCGCCACCTACCAATTCAAATGGAAGTTTTGAGTCATCTGATGATGTGTGG 1062
| ||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct 1162 ATGAGTACTCCACCACCTACCAATTCAAATGGAAGTTTCGAGTCGTCTGATGATGTGTGG 1221
Query 1063 CTTACTGTATCCGAGATCCCCCTCTTTACGCAACCTACGAGTGCTCCGCCACCTACGAGA 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1222 CTTACTGTATCCGAGATCCCCCTCTTTACGCAACCTACGAGTGCTCCGCCACCTACGAGA 1281
Query 1123 CCTCCACCACCAAGACCTACACGTCCTATAAAAAAGAGGGTTAACGAGCCTTCTATACCG 1182
||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||
Sbjct 1282 CCTCCACCACCAAGACCTACACGTCCTATTAAAAAGAAGGTTAATGAGCCTTCTATACCG 1341
Query 1183 ACCTCTACTAACCACTCACACATTCCTAGCACAGCTAGAGCTTCTGTAAATAGCCCGGCA 1242
|| ||| || ||||||||||| |||||||| ||| ||||||||||||||||||||| ||
Sbjct 1342 ACGTCTGCTTACCACTCACACGTTCCTAGCTCAGGAAGAGCTTCTGTAAATAGCCCGACA 1401
Query 1243 GCATCTCAAATCGATGAACTCGAGGATTTTTCTATTGGCAGAAATCAGACCGCTGCTAAT 1302
||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 1402 GCATCTCAAATGGATGAACTCGACGATTTTTCTATTGGCAGAAATCAGACCGCTGCGAAT 1461
Query 1303 GGATATCCTGATCCTCCCTCTGGTGAAGATTCAGATGTTTTTTCTGCTGCCGCTGCATCA 1362
||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1462 GGATATCCTGATCCTTCCTCTGGTGAAGATTCAGATGTTTTTTCTACTGCCGCTGCATCA 1521
Query 1363 GCTGCTGCCATGAAGGATGCCATGGATAAAGCAGAAGCAAAGTTTAGGCATGCTAAGGAA 1422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1522 GCTGCTGCCATGAAGGATGCCATGGATAAAGCAGAAGCAAAGTTTAGGCATGCTAAGGAA 1581
Query 1423 AGGAGAGTGAAAGAAAATTTGAAGGCAAGTAGAAATAGAGAAGAAGATCAAACAGAGAAT 1482
||||||| ||||||||||||||| |||||||||| |||||||| |||||| ||||| |||
Sbjct 1582 AGGAGAGAGAAAGAAAATTTGAAAGCAAGTAGAAGTAGAGAAGGAGATCACACAGAAAAT 1641
Query 1483 TATGATTCTCGTGAAAGGGAACTTAGAGAAAATCAAGTGAGATTGGACCGTGAAagggca 1542
|||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct 1642 TATGATTCTCGTGAAAGGGAACTTAGAGAAAAGCAAGTGAGATTGGACCGTGAGAGGGCA 1701
Query 1543 gagagggaggcagagatggtaaaagagcaggagagggagagagaggagagagaaagagag 1602
||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||
Sbjct 1702 GAGAGGGAGGCAGAGATGGAAAAAGCCCAGGAGAGGGAGAAAGAGGAGAGAGAAAGAGAG 1761
Query 1603 cagaagagaattgagagagaaagggaaagaCTGTTGGCTAGACAGGCGGTAGAGAGGGCT 1662
||||| |||||||| ||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 1762 CAGAAAAGAATTGAAAGAGAAAGGGAAAGATTGGTGGCTAGACAGGCGGTAGAGAGGGCT 1821
Query 1663 ACAAGGGAAGCACGCGAAAGAGCAGCCACTGAAGCTCATGCGAAAGTTCAAAGAGCTGCT 1722
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1822 ACAAGGGAAGCACGCGAAAGAGCAGCCACGGAAGCTCATGCGAAAGTTCAAAGAGCTGCT 1881
Query 1723 GTTGGGAAGGCTACCGATGCCCGAGAGCGCGCCGAAAGAGCAGCGGTTCAAAGAGCCCAT 1782
||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 1882 GTTGGAAAGGCTACCGATGCCCGAGAGCGCGCCGAAAGAGCAGCAGTTCAAAGAGCGCAT 1941
Query 1783 GCTGAAGCACGTGAAAGGGCAGCTGCAGGGGCAAGAGAAAAGGCTGCGAAAGCTGCGGCA 1842
|||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct 1942 GCTGAAGCACGTGAAAGGGCAGCTGCAGGGGCAAGAGATAAGGCGGCGAAAGCTGCGGCA 2001
Query 1843 GAAGCTAGAGAAAAGGCTGAGAAAGCTGCAGCAGAAGCTAGAGAAAGGGTGAATGCTGAA 1902
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 2002 GAAGCTAGAGAAAAGGCTGAGAAAGCTGCAGCAGAAGCTAAAGAAAGGGCGAATGCTGAA 2061
Query 1903 GCGCGGGAGAAGGAAGCAAGGGTTAGGGCAGAACGAGCTGCTGTGGAAAGAGCAGCTGCT 1962
||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||
Sbjct 2062 GCGCGGGAGAAGGAAACAAGGGTTAGGGCTGAACGAGCTGCTGTGGAAAGGGCAGCTGCT 2121
Query 1963 GAGGCACGTGGAAGGGCAGCTGCCCAAGCTAAAGCTAAGCAGCAGCAAGAAAATAACAAT 2022
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2122 GAGGCACGTGGAAGGGCAGCTGCCCAAGCTAAAGCTAAGCAGCAGCAAGAAAATACCAAT 2181
Query 2023 GATCTTGACTCCTTCTTTAGCTCAATTTCTAGACCAAACAGTGCTCCACGACAGAGAACC 2082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2182 GATCTTGACTCCTTCTTTAGCTCAATTTCTAGACCAAACAGTGCTCCACGACAGAGAACC 2241
Query 2083 AACCCTCTGGATCCTTTCCAGGATTCATGGAACAAAGGAGGATCTTTCGAATCTAGAAGG 2142
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2242 AACCCTCTGGATCCTTTCCAGGATTCATGGAACAAAGGAGGATCTTTCGAATCTAGCAGG 2301
Query 2143 GAATCTTCGCGAGTGCCTTCTGGCCCTAC-AGAGAATTTGAGAAAGGCCTCTTCAGTAAC 2201
||||||| |||||||||| |||||| || |||||| ||||||||| |||||||||||||
Sbjct 2302 GAATCTTTGCGAGTGCCTCCTGGCCA-ACCAGAGAACTTGAGAAAGACCTCTTCAGTAAC 2360
Query 2202 AAACATTGTTGATGATCTCAGTTCAATATTTGGAGGTAGTGCAATTTCTGAGCTACCCAA 2261
||||||||||||||||||||||||||| ||||||| | || | |||| |||||
Sbjct 2361 AAACATTGTTGATGATCTCAGTTCAATTTTTGGAG------C--TT-C--AGCTTCCCAA 2409
Query 2262 TCTGGTGGGTTTCAAGATGTTGATGGAGAAACTGAAGAGAGACGACGTGCCAGGCTGGAA 2321
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2410 TCTGGTGGGTTTCAAGATGTTGATGGAGAAACTGAAGAGAGACGACGTGCCAGACTGGAA 2469
Query 2322 CGCCACCAGAGGACACAGGAGCGGGCT 2348
|||||||||||||||||||||||||||
Sbjct 2470 CGCCACCAGAGGACACAGGAGCGGGCT 2496
Score = 549 bits (297), Expect = 5e-155
Identities = 346/370 (94%), Gaps = 2/370 (1%)
Strand=Plus/Plus
Query 2395 AAAGCACTTGCTGAGAAAAATGAACGTGATCTACAAGTACAAAGAGAACAAGCTGAGAAA 2454
|||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct 2500 AAAGCACTTGCTGAGAAAAATGAACGTGATCTTCAAGTACAAAGAGAACAAGTTGAGAAA 2559
Query 2455 GATAGGATTGGTGAGACCCTGGATGTTGAGATAAGACGTTGGGGTGCAGGGAAGGAGGGA 2514
||||||||||| | ||| |||||||||||||||| |||||||||||| ||||||||||||
Sbjct 2560 GATAGGATTGGGGTGACTCTGGATGTTGAGATAAAACGTTGGGGTGCGGGGAAGGAGGGA 2619
Query 2515 AACTTGCGTGCTCTGCTTTCGACATTACAATATGTTCTATGGCCAGAATGCGGTTGGCAG 2574
||| |||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 2620 AACCTGCGAGCTCTGCTTTCGACATTACAATATGTTCTTTGGCCAGAATGTGGTTGGCAA 2679
Query 2575 CCTGTTTCATTGACCGATTTAATTACCGG-AGCATCTGTCAAGAAAGTTTACAGGAAGGC 2633
|||||||||||||| |||||||||| ||| || ||||||||||||||||||||||||||
Sbjct 2680 CCTGTTTCATTGACTGATTTAATTA-CGGCTGCGTCTGTCAAGAAAGTTTACAGGAAGGC 2738
Query 2634 CACTCTCTGTATACATCCTGACAAAGTTCAGCAAAAAGGGGCCAATCTCCAGCAGAAATA 2693
|||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 2739 CACTCTATGTATACACCCTGATAAAGTTCAGCAAAAAGGAGCCAATCTCCAGCAGAAATA 2798
Query 2694 CATTGCCGAGAAAGTTTTCGACATGCTCAAGGAAGCATGGAACAAGTTCAACTCAGAAGA 2753
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct 2799 CATTGCCGAGAAAGTTTTTGACATGCTCAAGGAAGCATGGAACAAGTTTAACTCAGAAGA 2858
Query 2754 ACTCTTTTGA 2763
|||||| |||
Sbjct 2859 ACTCTTCTGA 2868
> AT4G12770.1 | Symbols: | Chaperone DnaJ-domain superfamily protein
| chr4:7506382-7511566 REVERSE LENGTH=3188
Length=3188
Score = 2691 bits (1457), Expect = 0.0
Identities = 1740/1874 (93%), Gaps = 30/1874 (2%)
Strand=Plus/Plus
Query 1 ATGGATGATTTCACAGGATTGTTAGCGAGAGACTTCGGTTTGAAACCTCAGGGCAAATCA 60
|||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 159 ATGGATGATTTCACAGGATTGTTAGCGAGAGACTTCGGATTGAAACCTCAAGGCAAATCT 218
Query 61 GCTCCCATGGCTGCTCAATCGAACTCTTCTGCTTCTGATTTCAACAGTTTCGCTTCTTCT 120
|| ||||||||| ||||||| ||||||||||| |||||||||||| |||||||||||||
Sbjct 219 GCGCCCATGGCTTCTCAATCAAACTCTTCTGCCGCTGATTTCAACACTTTCGCTTCTTCT 278
Query 121 TATAGCTTCGCCAAC-GCCGCCGGTAAAAAGTCGGAATCTTTGCCGGTGTTTGACGATCT 179
|||||||||||| | ||||| |||||||||||||| |||||||||||||||||||||||
Sbjct 279 TATAGCTTCGCC-TCTGCCGCTGGTAAAAAGTCGGATTCTTTGCCGGTGTTTGACGATCT 337
Query 180 TGGTCGAGATGGTGATGATCTTCTCTTCAAAGATGTGTTTAGCGGACCACCACCAAAGTA 239
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 338 TGGTCGAGATGGTGATGATCTTCTCTTCAGAGATGTGTTTAGCGGACCACCACCAAAGTA 397
Query 240 CGGATCCTCTTCTGGGGATTCTCGTTCTCCACCTGCTTCTGCTTTTGACTATGATGCTAT 299
||| |||||||| ||||||||||||||| ||||| |||||||||||||||||| |||
Sbjct 398 TGGA---TCTTCTGGTGATTCTCGTTCTCCATCTGCTCCTGCTTTTGACTATGATGTTAT 454
Query 300 GTTCAAGGAACCCAAATCCAAACCGGCGTCGTCCATGCCGGTCTATGACAAGCCTGTGTA 359
|||||||||||||||||||||| | |||||||| |||||||| ||||| |||||||||||
Sbjct 455 GTTCAAGGAACCCAAATCCAAATCAGCGTCGTCTATGCCGGTTTATGATAAGCCTGTGTA 514
Query 360 TGATGATGAGGATGTGTTTGAGTCTATTCCTGAGCTCAAAATCCCATCCACTTCTTCTCA 419
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 515 TGATGATGAGGATGTGTTTGAGTCTATTCCTGAGCTCAAAATCCCTTCCACTTCTTCTCA 574
Query 420 ATCTGCTAGGTTTGATG-ATG-TTT-TC-TC--T-TCA-C--CTCCT---AAGCACAGGA 466
|| ||||||||||| | ||| ||| || || | ||| | ||||| ||||||||||
Sbjct 575 GTCAGCTAGGTTTGA-GAATGTTTTCTCTTCTATCTCATCTTCTCCTACGAAGCACAGGA 633
Query 467 AACAGAACAGTTCTCCTTTTGATGATCTCATGGGCAACAATTTGGGGAAGAGAGGGACAG 526
||||||||||||||||||| |||||||||||||| |||||||||||| | ||| | ||
Sbjct 634 AACAGAACAGTTCTCCTTTCGATGATCTCATGGGAAACAATTTGGGG-A-AGA---A-AG 687
Query 527 AGAGTGACCGAGAGGAGAAGGCTAGCTCCATTTTTGATGACTTGATTCCCGGGTTTGGTC 586
||||||||||||||||||||| ||| |||||||||||||| || ||||||||||||||||
Sbjct 688 AGAGTGACCGAGAGGAGAAGGGTAGTTCCATTTTTGATGATTTAATTCCCGGGTTTGGTC 747
Query 587 GCACTAGCTCTCCTCCTCCTAAACGGAAAACTTCAGAGACAACAAATCAATCCCAGAAAC 646
|||||||||||||||| ||||||||| ||||||||||||||| | ||||||||||||||
Sbjct 748 GCACTAGCTCTCCTCCAGCTAAACGGACAACTTCAGAGACAACTAGTCAATCCCAGAAAC 807
Query 647 CTCCGTATCGGACTGCCGAGACATCTTCCAATGTGGAAGAAGACCCATTTGTAGTCTTGG 706
|||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct 808 CTCCGTATCGGACTGCCGAGACATCTTCTAATGTGAAAGAAGACCCATTTGTAGTCTTGG 867
Query 707 AGGAGTCTGCATCAACCCCTAGAGAACCTTCCACGGGAGGGTTCACTGATCCATTGGAGG 766
|||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct 868 AGGAGTCTACATCAACCCTTAGAGAACCTTCCACAGGAGGGTTCACTGATCCATTGGAGG 927
Query 767 ATATTGGGAAATTCAACAGCAGAAAAACTGATCATTCATCTGTCCACAGAGGAGTGTTTG 826
| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct 928 AAATTGGTAAATTCAACAGCAGAAAAACTGATCATTCATCTGTCCACGGAGGAGTATTTG 987
Query 827 TTGATATTGACCCTCTCGATAGTCTTGGAAAATCAGGGCCGGATATGAATAATAGAGGCA 886
|||||| ||| ||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct 988 TTGATACTGATCCTCTCGATAGTCTTGGAAAATCAGGGCCAGATATGAATAGTAGAGGCA 1047
Query 887 AAAGTCATTTAAGACCACCAGGAAACATCAGTGGCTCCCAGTCACCACCAGTAGAAAGTC 946
| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1048 AGAGTCATTTAAGGCCACCAGGAAACATCAGTGGCTCCCAGT---CACCAGTAGAAAGTT 1104
Query 947 CTGGGAGTTACCATTCGAAGAAAGTTTCATTTGATGATGTTTTAGAGCCACAGAATACGA 1006
||||| ||||||||| ||||| |||||||||||||||||| ||||||| ||||||||||
Sbjct 1105 CTGGGCTTTACCATTCTAAGAATGTTTCATTTGATGATGTTGTAGAGCCGCAGAATACGA 1164
Query 1007 GTACTCCGCCACCTACCAATTCAAATGGAAGTTTTGAGTCATCTGATGATGTGTGGCTTA 1066
||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct 1165 GTACTCCACCACCTACCAATTCAGATGGAAGTTTTGAATCATCTGATGATGTGTGGCTTA 1224
Query 1067 CTGTATCCGAGATCCCCCTCTTTACGCAACCTACGAGTGCTCCGCCACCTACGAGACCTC 1126
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1225 CTGTATCTGAGATCCCCCTCTTTACGCAACCTACGAGTGCTCCACCACCTACGAGACCTC 1284
Query 1127 CACCACCAAGACCTACACGTCCTATAAAAAAGAGGGTTAACGAGCCTTCTATACCGACCT 1186
||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||| |
Sbjct 1285 CACCACCAAGACCTACACGTCCTATTAAAAAGAAGGTTAATGAGCCTTCTATACCGACGT 1344
Query 1187 CTACTAACCACTCACACATTCCTAGCACAGCTAGAGCTTCTGTAAATAGCCCGGCAGCAT 1246
|| || ||||||||||| |||||||| ||| ||||||||||||||||||||| ||||||
Sbjct 1345 CTGCTTACCACTCACACGTTCCTAGCTCAGGAAGAGCTTCTGTAAATAGCCCGACAGCAT 1404
Query 1247 CTCAAATCGATGAACTCGAGGATTTTTCTATTGGCAGAAATCAGACCGCTGCTAATGGAT 1306
||||||| ||||||||||| |||||||||||||||||||||||||| ||||| |||||||
Sbjct 1405 CTCAAATGGATGAACTCGACGATTTTTCTATTGGCAGAAATCAGACAGCTGCGAATGGAT 1464
Query 1307 ATCCTGATCCTCCCTCTGGTGAAGATTCAGATGTTTTTTCTGCTGCCGCTGCATCAGCTG 1366
||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct 1465 ATCCTGATCCTTCCTCTGGTGAAGATTCAGATGTTTTTTCTACTGCAGCTGCATCAGCTG 1524
Query 1367 CTGCCATGAAGGATGCCATGGATAAAGCAGAAGCAAAGTTTAGGCATGCTAAGGAAAGGA 1426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1525 CTGCCATGAAGGATGCCATGGATAAAGCAGAAGCAAAGTTTAGGCATGCTAAGGAAAGGA 1584
Query 1427 GAGTGAAAGAAAATTTGAAGGCAAGTAGAAATAGAGAAGAAGATCAAACAGAGAATTATG 1486
| | |||||||| ||||||||||||||||| |||||||| ||||| || || |||||||
Sbjct 1585 GGGAGAAAGAAAGTTTGAAGGCAAGTAGAAGTAGAGAAGGCGATCACACGGAAAATTATG 1644
Query 1487 ATTCTCGTGAAAGGGAACTTAGAGAAAATCAAGTGAGATTGGACCGTGAAagggcagaga 1546
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1645 ATTCTCGTGAAAGGGAACTTAGAGAAAAGCAAGTGAGATTGGACCGTGAAAGGGCAGAGA 1704
Query 1547 gggaggcagagatggtaaaaga-gcaggagagggagagagaggagagagaaagagagcag 1605
||||||||||||||| |||| | |||| |||||||||||||||||||||||||||||||
Sbjct 1705 GGGAGGCAGAGATGG-AAAAAACCCAGGCGAGGGAGAGAGAGGAGAGAGAAAGAGAGCAG 1763
Query 1606 aagagaattgagagagaaagggaaagaCTGTTGGCTAGACAGGCGGTAGAGAGGGCTACA 1665
|| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1764 AAAAGAATTGAAAGAGAAAGGGAAAGACTGTTGGCTAGACAGGCGGTAGAGAGGGCTACA 1823
Query 1666 AGGGAAGCACGCGAAAGAGCAGCCACTGAAGCTCATGCGAAAGTTCAAAGAGCTGCTGTT 1725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1824 AGGGAAGCACGCGAAAGAGCAGCCACTGAAGCTCATGCGAAAGTTCAAAGAGCTGCTGTT 1883
Query 1726 GGGAAGGCTACCGATGCCCGAGAGCGCGCCGAAAGAGCAGCGGTTCAAAGAGCCCATGCT 1785
||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1884 GGGAAGGTTACTGATGCCCGAGAGCGCGCCGAAAGAGCAGCAGTTCAAAGAGCCCATGCT 1943
Query 1786 GAAGCACGTGAAAGGGCAGCTGCAGGGGCAAGAGAAAAGGCTGCGAAAGCTGCGGCAGAA 1845
||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||
Sbjct 1944 GAAGCACGTGAAAGGGCAGCTGCTGGGGCAAGAGAAAAGGCTGAGAAAGCTGCAGCAGAA 2003
Query 1846 GCTAGAGAAAAGGC 1859
|||||||||| |||
Sbjct 2004 GCTAGAGAAAGGGC 2017
Score = 713 bits (386), Expect = 0.0
Identities = 464/500 (93%), Gaps = 11/500 (2%)
Strand=Plus/Plus
Query 1849 AGAGAAAAGGCTGAGAAAGCTGCAGCAGAAGCTAGAGAAAGGGTGAATGCTGAAGCGCGG 1908
||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 1974 AGAGAAAAGGCTGAGAAAGCTGCAGCAGAAGCTAGAGAAAGGGCGAATGCTGAAGTGCGG 2033
Query 1909 GAGAAGGAAGCAAGGGTTAGGGCAGAACGAGCTGCTGTGGAAAGAGCAGCTGCTGAGGCA 1968
|| |||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct 2034 GAAAAGGAAGCAAAGGTTAGGGCAGAACGAGCTGCTGTTGAAAGGGCAGCTGCTGAGGCA 2093
Query 1969 CGTGGAAGGGCAGCTGCCCAAGCTAAAGCTAAGCAGCAGCAAGAAAATAACAATGATCTT 2028
||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||
Sbjct 2094 CGTGGAAGGGCAGCTGCTCAAGCTAAAGCTAAGCAGCAGCAAGAGAATAATAATGATCTT 2153
Query 2029 GACTCCTTCTTTAGCTCAATTTCTAGACCAAACAGTGCTCCACGACAGAGAACCAACCCT 2088
||||||||||||| ||| |||||||||||| ||||| |||| |||||||||||||||||
Sbjct 2154 GACTCCTTCTTTAACTCGGTTTCTAGACCAAGCAGTGTTCCAAGACAGAGAACCAACCCT 2213
Query 2089 CTGGATCCTTTCCAGGATTCATGGAACAAAGGAGGATCTTTCGAATCTAGAAGGGAATCT 2148
| ||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||
Sbjct 2214 CCGGATCCTTTCCAGGATTCATGGAACAAAGGAGGATCTTTTGAATCTAGCAGGCCATCT 2273
Query 2149 TCGCGAGTGCCTTCTGGCCCTACAGAGAATTTGAGAAAGGCCTCTTCAGTAACAAACATT 2208
||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct 2274 TCGCGAGTGCCTTCTGGCCCTACAGAGAACTTGAGAAAGGCCTCTTCAGCAACAAACATT 2333
Query 2209 GTTGATGATCTCAGTTCAATATTTGGAGGTAGTGCAATTTCTGAGCTACCCAATCTGGTG 2268
|||||||||||||||||||||||||||| | | | |||| ||||||||||||
Sbjct 2334 GTTGATGATCTCAGTTCAATATTTGGAGCT----C-----C--AGCTTCCCAATCTGGTG 2382
Query 2269 GGTTTCAAGATGTTGATGGAGAAACTGAAGAGAGACGACGTGCCAGGCTGGAACGCCACC 2328
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2383 GGTTTCAAGATGTTGATGGAGAAACTGAAGAGAGACGACGTGCCAGGCTGGAACGTCACC 2442
Query 2329 AGAGGACACAGGAGCGGGCT 2348
||||||||||||||||||||
Sbjct 2443 AGAGGACACAGGAGCGGGCT 2462
Score = 627 bits (339), Expect = 2e-178
Identities = 359/369 (97%), Gaps = 0/369 (0%)
Strand=Plus/Plus
Query 2395 AAAGCACTTGCTGAGAAAAATGAACGTGATCTACAAGTACAAAGAGAACAAGCTGAGAAA 2454
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2466 AAAGCACTTGCTGAGAAAAATGAACGTGATCTTCAAGTACAAAGAGAACAAGCTGAGAAA 2525
Query 2455 GATAGGATTGGTGAGACCCTGGATGTTGAGATAAGACGTTGGGGTGCAGGGAAGGAGGGA 2514
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2526 GATAGGATTGGTGGGACCCTGGATGTTGAGATAAGACGTTGGGGTGCAGGGAAGGAGGGA 2585
Query 2515 AACTTGCGTGCTCTGCTTTCGACATTACAATATGTTCTATGGCCAGAATGCGGTTGGCAG 2574
|||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 2586 AACTTGCGTGCTCTGCTTTCAACATTACAATATGTTCTTTGGCCAGAATGCGGTTGGCAG 2645
Query 2575 CCTGTTTCATTGACCGATTTAATTACCGGAGCATCTGTCAAGAAAGTTTACAGGAAGGCC 2634
||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2646 CCTGTATCGTTGACCGATTTAATTACCGGTGCATCTGTCAAGAAAGTTTACAGGAAGGCC 2705
Query 2635 ACTCTCTGTATACATCCTGACAAAGTTCAGCAAAAAGGGGCCAATCTCCAGCAGAAATAC 2694
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2706 ACTCTCTGTATACATCCTGACAAAGTTCAGCAAAAAGGAGCCAATCTCCAGCAGAAATAC 2765
Query 2695 ATTGCCGAGAAAGTTTTCGACATGCTCAAGGAAGCATGGAACAAGTTCAACTCAGAAGAA 2754
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 2766 ATTGCCGAGAAAGTTTTCGACATGCTCAAGGAAGCATGGAACAAATTCAACTCAGAGGAA 2825
Query 2755 CTCTTTTGA 2763
|||||||||
Sbjct 2826 CTCTTTTGA 2834
> AT2G02890.1 | Symbols: | F-box family protein | chr2:843913-846616
REVERSE LENGTH=1596
Length=1596
Score = 185 bits (100), Expect = 2e-45
Identities = 112/118 (95%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 1948 GAAAGAGCAGCTGCTGAGGCACGTGGAAGGGCAGCTGCCCAAGCTAAAGCTAAGCAGCAG 2007
||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 203 GAACGAGCCGCTGCTGAGGCACGTGGAAGTGCAGCTGCCCAAGCTAAAGCTAAGCAGCAG 144
Query 2008 CAAGAAAATAACAATGATCTTGACTCCTTCTTTAGCTCAATTTCTAGACCAAACAGTG 2065
||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||
Sbjct 143 CAAGAAAATAACAATGATCTTGAATCCTTCTTTAGCTCAGTTTCTAGACCAAGCAGTG 86
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 137256756048
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5