BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg333154
Length=1053
Score E
Sequences producing significant alignments: (Bits) Value
AT2G37790.1 | Symbols: | NAD(P)-linked oxidoreductase superfam... 1393 0.0
AT2G37770.2 | Symbols: | NAD(P)-linked oxidoreductase superfam... 684 0.0
> AT2G37790.1 | Symbols: | NAD(P)-linked oxidoreductase superfamily
protein | chr2:15838764-15840932 FORWARD LENGTH=1199
Length=1199
Score = 1393 bits (754), Expect = 0.0
Identities = 826/862 (96%), Gaps = 0/862 (0%)
Strand=Plus/Plus
Query 1 ATGGCAGAGGAAATTAGATTCTTTGAGCTCAACACTGGAGCGAAGATACCATCCGTTGGT 60
|||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||
Sbjct 75 ATGGCAGAGGAAATTAGATTCTTTGAACTCAACACCGGAGCGAAGATACCATCCGTCGGT 134
Query 61 CTCGGAACGTGGCAGGCCGATCCTGGTCTCGTCGGAAACGCTGTTGACGCTGCTGTGAAG 120
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 135 CTAGGAACGTGGCAGGCCGATCCTGGTCTCGTCGGAAACGCTGTCGACGCTGCTGTGAAG 194
Query 121 ATTGGCTATCGTCACATTGATTGTGCTCAAATCTATGGCAACGAAAAAGAGATTGGGTTA 180
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 195 ATTGGTTATCGTCACATTGATTGTGCTCAAATCTATGGCAATGAAAAAGAGATTGGGTTA 254
Query 181 GTCCTGAAGAAATTGTTTGATGATGGAGTTGTTAAGCGTGAGGAAATGTTCATCACATCC 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 255 GTCCTGAAGAAATTGTTTGATGGTGGAGTTGTTAAGCGTGAGGAAATGTTCATCACATCC 314
Query 241 AAACTCTGGTGTACTTATCATGATCCTCAAGAAGTGCCTGAGGCACTTAATAGAACTTTA 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 315 AAACTATGGTGTACTTATCATGATCCTCAAGAAGTGCCTGAGGCACTTAATAGAACTCTA 374
Query 301 CAGGATCTGCAGCTTGACTACGTCGATCTGTATCTCATTCACTGGCCTGTTAGCCTCAAG 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 375 CAGGATCTGCAGCTTGACTACGTCGATCTGTATCTCATTCACTGGCCTGTTAGCCTCAAG 434
Query 361 AAAGGTTCTACTGGCTTTAAACCAGAGAACATTTTGCCAACTGATATTCCTAGCACATGG 420
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 435 AAAGGATCTACTGGCTTTAAACCAGAGAACATTTTGCCAACTGATATTCCTAGCACATGG 494
Query 421 AAAGCAATGGAAGCACTCTTTGATGCGGGCAAGGCCCGAGCTATTGGTGTCAGCAATTTC 480
|||||||||||| ||||||||||| | ||||||||||| ||||||||||| || ||||||
Sbjct 495 AAAGCAATGGAATCACTCTTTGATTCAGGCAAGGCCCGTGCTATTGGTGTAAGTAATTTC 554
Query 481 TCCTCAAAGAAACTGGCAGATCTCTTGGCGGTGGCTCGGGTCCCTCCCGCTGTTAACCAA 540
|||||||||||||| ||||||||||||| ||||||||| || |||||||||||||||||
Sbjct 555 TCCTCAAAGAAACTCGCAGATCTCTTGGTGGTGGCTCGTGTTCCTCCCGCTGTTAACCAG 614
Query 541 GTGGAGTGTCACCCTTCATGGCAACAAAACGTGCTCAGGGATTTCTGCAAATCTAAAGGC 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 615 GTGGAGTGTCACCCTTCATGGCAACAAAACGTGCTCAGGGATTTCTGCAAATCTAAAGGC 674
Query 601 GTTCACCTCTCAGGATACTCTCCGTTGGGTTCTCCAGGGACAACATGGCTAAAGAGCGAT 660
||||| |||||||| |||||||| |||||||||||||| ||||| ||||||| |||||||
Sbjct 675 GTTCATCTCTCAGGGTACTCTCCTTTGGGTTCTCCAGGAACAACGTGGCTAACGAGCGAT 734
Query 661 GTTTTGAAGAACCCTATTCTTGGTGGTGTTGCTGAGAAGCTCGGCAAGACTCCTGCACAA 720
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 735 GTTTTGAAGAACCCTATTCTTGGTGGTGTTGCTGAGAAGCTCGGCAAGACTCCTGCACAG 794
Query 721 GTTGCACTACGCTGGGGTCTCCAAATGGGTCAAAGTGTTCTTCCAAAAAGCACACATGAA 780
|||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 795 GTTGCATTACGCTGGGGTCTCCAAATGGGTCAAAGTGTTCTTCCAAAAAGCACCCATGAA 854
Query 781 GACAGGATCAAACAGAATTTTGACGTTTTCAATTGGTCCATACCCGATGACATGTTATCC 840
|||||||||||||||||||| || |||||||| |||||||||||||| ||||||||||||
Sbjct 855 GACAGGATCAAACAGAATTTCGATGTTTTCAACTGGTCCATACCCGAAGACATGTTATCC 914
Query 841 AAGTTTTCTGAGATTGAACAGG 862
|||||||||||||||| |||||
Sbjct 915 AAGTTTTCTGAGATTGGACAGG 936
Score = 147 bits (79), Expect = 3e-34
Identities = 83/85 (98%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 967 CAGGGTAGGTTGGTGCGAGGCATGTCATTTGTTCATGAGACGAGTCCTTATAAGAGTCTT 1026
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 933 CAGGGTAGGTTGGTGCGAGGCATGTCATTTGTTCATGAGACGAGTCCATATAAGAGTCTT 992
Query 1027 GAAGAACTATGGGACGGTGAGATAT 1051
|||||||| ||||||||||||||||
Sbjct 993 GAAGAACTCTGGGACGGTGAGATAT 1017
> AT2G37770.2 | Symbols: | NAD(P)-linked oxidoreductase superfamily
protein | chr2:15834867-15836881 FORWARD LENGTH=1191
Length=1191
Score = 684 bits (370), Expect = 0.0
Identities = 696/852 (82%), Gaps = 28/852 (3%)
Strand=Plus/Plus
Query 26 AGCTCAACACTGGAGCGAAGATACCATCCGTTGGTCTCGGAACGTGGCAGGCCGATCCTG 85
|||||||||| || || ||| | || || || ||||| ||||| ||||| || |||||
Sbjct 47 AGCTCAACACCGGCGCTAAGTTCCCTTCGGTGGGTCTTGGAACATGGCAAGCTTCTCCTG 106
Query 86 GTCTCGTCGGAAACGCTGTTGACGCTGCTGTGAAGATTGGCTATCGTCACATTGATTGTG 145
| |||||||| | || || | ||| ||||| ||||||||||||||||||||||||||||
Sbjct 107 GCCTCGTCGGTGATGCAGTCGCCGCGGCTGTTAAGATTGGCTATCGTCACATTGATTGTG 166
Query 146 CTCAAATCTATGGCAACGAAAAAGAGATTGGGTTAGTCCTGAAGAAATTGTTTGATGATG 205
|||| ||||||||||||||||||||||||||| ||| ||||| ||||||||||| ||
Sbjct 167 CTCAGATCTATGGCAACGAAAAAGAGATTGGGGCAGTTCTGAAAAAATTGTTTGAAGACA 226
Query 206 GAGTTGTTAAGCGTGAGGAAATGTTCATCACATCCAAACTCTGGTGTACTTATCATGATC 265
|||| || || || ||||| |||||||||| |||||||||||||||||| ||||||| |
Sbjct 227 GAGTAGTGAAACGCGAGGATTTGTTCATCACCTCCAAACTCTGGTGTACTGATCATGACC 286
Query 266 CTCAAGAAGTGCCTGAGGCACTT-AATAGAACTTTACA-GGATCTGCAGCTTGACTACGT 323
||||||| || || |||||| || || |||||| | || ||||||||||||||| |||||
Sbjct 287 CTCAAGATGTCCCGGAGGCA-TTGAACAGAACTCT-CAAGGATCTGCAGCTTGAATACGT 344
Query 324 CGATCTGTATCTCATTCACTGGCCTGTTA-GCCTCAAGAAAGGTTCTACTGGCTTTAAA- 381
|||||| ||||| || |||||||||| | | | |||||||||||| ||| | |||
Sbjct 345 CGATCTTTATCTGATACACTGGCCTGC-ACGGATAAAGAAAGGTTCTGTTGGAAT-AAAG 402
Query 382 CCAGAGAACATTTTGCCAACT-GATATTCCTAGCACATGGAAAGCAATGGAAGCACTCTT 440
||||||||| ||||||| | ||||||||||| ||||||||||| ||||||||||| |
Sbjct 403 CCAGAGAACCTTTTGCCTG-TAGATATTCCTAGTACATGGAAAGCGATGGAAGCACTATA 461
Query 441 TGATGCGGGCAAGGCCCGAGCTATTGGTGTCAGCAATTTCTCCT-CAAAGAAACTGGCAG 499
||| |||||||||| ||||| || ||||| ||||||||||| | | |||||||| || |
Sbjct 462 CGATTCGGGCAAGGCACGAGCCATAGGTGTAAGCAATTTCTC-TACCAAGAAACTAGCTG 520
Query 500 ATCTCTTGGCGGTGGCTCGGGTCCCTCCCGCTGTTAACCAAGTGGAGTGTCACCCTTCAT 559
||||||||| | | ||||| || ||||| |||||||| || || || ||||| ||||| |
Sbjct 521 ATCTCTTGGAGTTAGCTCGTGTTCCTCCTGCTGTTAATCAGGTCGAATGTCATCCTTCTT 580
Query 560 GGCAACAAAACGT--GCT-CAGGGATTTCTGCAAATCTAAAGGCGTTCACCTCTCAG-G- 614
||| ||||| | | ||| || | ||| ||||||||| ||||| |||||||| || |
Sbjct 581 GGCGACAAA-C-TAAGCTACAAGAATT-CTGCAAATCCAAAGGGGTTCACCTA--AGTGC 635
Query 615 ATACTCTCCGTTGGGTTCTCCAGGGACAACATGGCTAAAGAGCGATGTTTTGAAGAACCC 674
|||||| || || ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 636 ATACTCGCCATTAGGTTCTCCAGGGACAACATGGCTGAAGAGCGATGTTTTGAAGAACCC 695
Query 675 TATTCTTGG-TGGTG-TTGCTGAGAAGCTCGGCAAGACTCCTGCACAAGTTGCACTACGC 732
|| || | | || |||| || || ||||| |||| |||||| ||||| || || ||
Sbjct 696 GATACT-GAATA-TGGTTGCGGAAAAACTCGGAAAGAGTCCTGCGCAAGTCGCCCTTCGT 753
Query 733 TGGGGTCTCCAAATGGGTCAAAGTGTTCTTCCAAAAAGCACACATGAAG-ACAGGATCAA 791
||||| |||||||||||||| ||||| ||||| || || ||| |||||| | ||||||||
Sbjct 754 TGGGGACTCCAAATGGGTCACAGTGTGCTTCCCAAGAGTACAAATGAAGGA-AGGATCAA 812
Query 792 ACAGAATTTTGACGTTTTCAATTGGTCCATACCCGATGACATGTTATCCAAGTTTTCTGA 851
| |||| ||| | |||||| | ||||| ||||||||| ||||||| | |||||| ||||
Sbjct 813 AGAGAACTTTAATGTTTTCGACTGGTCAATACCCGATTACATGTTCGCTAAGTTTGCTGA 872
Query 852 GATTGAACAGGC 863
||||||||||||
Sbjct 873 GATTGAACAGGC 884
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 51640703116
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5