BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg333193
Length=1350
Score E
Sequences producing significant alignments: (Bits) Value
AT1G78490.1 | Symbols: CYP708A3 | cytochrome P450, family 708, ... 1539 0.0
AT3G44970.1 | Symbols: | Cytochrome P450 superfamily protein |... 233 3e-60
AT1G55940.1 | Symbols: CYP708A1 | cytochrome P450, family 708, ... 115 1e-24
> AT1G78490.1 | Symbols: CYP708A3 | cytochrome P450, family 708,
subfamily A, polypeptide 3 | chr1:29528253-29530665 FORWARD
LENGTH=1810
Length=1810
Score = 1539 bits (833), Expect = 0.0
Identities = 1060/1166 (91%), Gaps = 29/1166 (2%)
Strand=Plus/Plus
Query 80 ATGGG-TTTCCAATCATTGGAGAGACTATTGATTTCTTAAAGCCTTGTGGATTC-AACGA 137
||||| ||||||||||||||||||||| | |||||||| |||||||||||| || || |
Sbjct 214 ATGGGTTTTCCAATCATTGGAGAGACTCTCGATTTCTTTAAGCCTTGTGGAGTCGAA-GG 272
Query 138 TATCCCAACCTTTGTAAAGAAGAGGATGATAAGGTATGGACTGTTGTTTCGGACAAACAT 197
||||||||||||||| ||||||||||||||||||||||| | ||||||||| ||||||||
Sbjct 273 TATCCCAACCTTTGTTAAGAAGAGGATGATAAGGTATGGGCCGTTGTTTCGAACAAACAT 332
Query 198 TTTCGGTTCCAAAACCGTGGTTTCGGCGGATCCAGATGTAATCAACCAGATTTTCCGGCA 257
||| ||||||||||||||||||||| | ||||| ||||| ||| ||||||||||||||||
Sbjct 333 TTTTGGTTCCAAAACCGTGGTTTCGACAGATCCGGATGTGATCCACCAGATTTTCCGGCA 392
Query 258 AGAGAACACGTCTTTTGGGCTAGGCTATCCGGACATACTTGTGAAAGTATTTGGAAAAGA 317
||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||
Sbjct 393 AGAGAACACGTCTTTTGAGCTAGGCTATCCAGACATATTTGTGAAAGTATTTGGAAAAGA 452
Query 318 TAATTTGTTCTTGAAGGAAGTGTTCATCCACAAGTACCTCCACAAAGTCACTATGCAAAT 377
|||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct 453 TAATTTGTTCTTGAAGGAAGTGTTCATCCACAAGTACCTCCAAAAAATCACTATGCAAAT 512
Query 378 TATTGGCTCCGAGGGTTTGAAGCAAACAATGATAGGAAACATGGACAAAGCTACCCGCGA 437
| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct 513 TCTTGGCTCCGAGGGTTTGAAGCAAACAATGTTAGGAAACATGGACAAAGCAACCCGCGA 572
Query 438 CCATTTTAGATTGAAGGCTAGCCAGGGGAGCTTCAATGTTCGTAAAGAAGTTGAAAACTT 497
|||| |||| | | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 573 CCATATTAGGTCCATTGCTAGCCAGGGGAGCTTCAATGTTCGTAAAGAAGTTGAAAACTT 632
Query 498 GATTGTGGCGTACATGACACCAAAGCTGATAAGTAACCTTAAACCAGAGACGCAATCAAA 557
| | || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 633 GGTAGTAGCGTACATGACACCAAAGCTGATAAGTAACCTTAAACCAGAGACGCAATCAAA 692
Query 558 GCTTATAGATAATCTCAACGCCTTCAATCTTGATTGGTTTCAGTCCTTCTTTAGTCTCTC 617
|||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||
Sbjct 693 GCTTATAGATAATCTCAACGCCTTCAATCTTGATTGGTTTAAGTCCTTCTTAAGACTCTC 752
Query 618 TTCTTGGAAAGCTCTCATCAAAGTCCTCAAGTCACGCGGAGAAGCGATTCAGGTGATGAA 677
| ||||||||||| ||| ||||| |||||||||||||| |||||| || |||||||||||
Sbjct 753 TACTTGGAAAGCTGTCACCAAAGCCCTCAAGTCACGCGAAGAAGCTATCCAGGTGATGAA 812
Query 678 AGACGTTCTCAGT-ATGAGAAGAGAGTCACGAGAGAAGCAAGAAGACTTACTCAACACG- 735
||||||||||| | ||||||| |||| | |||||||||||||||||||| || ||||||
Sbjct 813 AGACGTTCTCA-TGATGAGAAAAGAGACGCGAGAGAAGCAAGAAGACTTCCTTAACACGC 871
Query 736 TTGCTAGAAGAACTGGACAAAGAAAGTAGCATTTTCGACCAAGGATCCGCTACAAACCTC 795
|| |||||||||||||| ||||| ||||| |||||||||||||||| |||| ||| |||
Sbjct 872 TT-CTAGAAGAACTGGAGAAAGACGGTAGCTTTTTCGACCAAGGATCGGCTATAAATCTC 930
Query 796 ATCTTCCTTCTGGCATTCGTCGCGAGAGAAGGTACCTCCAGTTGTACTGCTTTGGCCGTG 855
|||||||||||||| || | | ||||||||||||||| |||||||||||||||||||||
Sbjct 931 ATCTTCCTTCTGGCGTTTGCCTTGAGAGAAGGTACCTCTAGTTGTACTGCTTTGGCCGTG 990
Query 856 AAATTCATATCCAAAGACCCGAAAGTGCTTGCAGAGCTCAAGCGTGAGCATAAGGCAATT 915
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 991 AAGTTCATATCCAAAGACCCGAAAGTGCTTGCAGAGCTCAAGCGTGAGCATAAGGCAATT 1050
Query 916 GTAGACAACAGAAAAGATAAGAAAGCTGGAGTTAGCTGGGAAGAATACACACACAACATG 975
||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||
Sbjct 1051 GTAGACAACAGAAAAGATAAGGAAGCTGGAGTTAGCTGGGAAGAATATAGACACAACATG 1110
Query 976 ACTTTCACAAACATGGTTATCAATGAG-TCGCTTCGCCT-GTCAAACACGACCCCTTTAT 1033
|||||||| |||||||||| ||||||| | ||||||||| | |||||||||||||||| |
Sbjct 1111 ACTTTCACCAACATGGTTAGCAATGAGGT-GCTTCGCCTAG-CAAACACGACCCCTTTGT 1168
Query 1034 TGTTTCGAAAGGCACTGCACGATGTTGAGATCAAAGGCAAGTACTACTTGGAAAGATATA 1093
||||||||||||| |||| ||||||||||||||||| | || ||| || | |
Sbjct 1169 TGTTTCGAAAGGCGGTGCAAGATGTTGAGATCAAAGG-A--TA-TAC----AA---T-T- 1215
Query 1094 CAATTCCGGCTGGTTGGATTGTGGCAGTTGCACCTTCAGCGGTTCATTATGATCCTACAA 1153
| | |||||||||||||||||| |||||||||||||||||||||| ||||||| |||
Sbjct 1216 C----C-GGCTGGTTGGATTGTGGCGGTTGCACCTTCAGCGGTTCATTTTGATCCTGCAA 1270
Query 1154 ACTATGAGAACCCATTTGAGTTTAATCCATGGAGATGGGAGGGGAAAGAAATGACTCGGG 1213
||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct 1271 TCTATGAGAACCCATTTGAGTTTAATCCATGGAGATGGGAGGGGAAAGAAATGATTTGGG 1330
Query 1214 GGTCTAAAACGTTCATGGCGTTTGGA 1239
| ||||||||||||||||||||||||
Sbjct 1331 GATCTAAAACGTTCATGGCGTTTGGA 1356
Score = 121 bits (65), Expect = 2e-26
Identities = 73/77 (95%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 1 ATGAGCTCCATATGGAACGTTGCAATGTTGATATTAGCCTTAGTGGTTGTGAGGATCAGC 60
|||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||
Sbjct 97 ATGAGCTCCATATGGAACGTTGCAATGTTGATGGTAGCTTTGGTGGTTGTGAGGATCAGC 156
Query 61 CACTGGCTTTACCGATG 77
|||||||||||||||||
Sbjct 157 CACTGGCTTTACCGATG 173
> AT3G44970.1 | Symbols: | Cytochrome P450 superfamily protein
| chr3:16432443-16434848 FORWARD LENGTH=1440
Length=1440
Score = 233 bits (126), Expect = 3e-60
Identities = 876/1218 (72%), Gaps = 131/1218 (11%)
Strand=Plus/Plus
Query 80 ATGGGTTT-CCAATCATTGGAGAGACTATT-GATTTCTTAAAGCCTTGTGGATTCAACGA 137
|||||||| || ||||| |||||||| ||| |||||||| ||||||| ||||||| ||||
Sbjct 118 ATGGGTTTCCCGATCATCGGAGAGAC-ATTAGATTTCTTTAAGCCTTATGGATTCTACGA 176
Query 138 TATC-CCAACC-TTTGTAAAGAAGAGGATGATAAGGTATGGACTGTTGTTTCGGACAAAC 195
||| || || | | | ||||| | |||| |||||||||| | || ||||||||||||
Sbjct 177 GATCTCC--CCATATCTCAAGAAAAAGATGTTAAGGTATGGGCCATTATTTCGGACAAAC 234
Query 196 ATT-TTCGG-TTCCAAAACCGTGGTTTCGGCGGATCCA-GATG-TAATCAACCAGATTTT 251
||| || || | ||||||||||| ||| ||||| | |||| ||| || |||||||
Sbjct 235 ATTCTT-GGAGT-AAAAACCGTGGTATCGACGGAT-AAGGATGTTAA-CATGGAGATTTT 290
Query 252 CCGGCAAGAGAACACGTCTTTTGGGCTAGGCTATCCGGACAT-ACTT-GTGAAAG-TATT 308
| |||||||||| |||||| || | ||||||| || || || ||| |||
Sbjct 291 AAGACAAGAGAACAAGTCTTTCATTTTAAGTTATCCGG--ATGGTTTAATG-AAGCCATT 347
Query 309 TGGAAAAGATAATTTGTTCTTGAAGGAAGT-G-TTCATCCACAAGTACCTC-CACAAAGT 365
|||||||||| ||||||||||| | | | | |||||||||| || || ||||| |
Sbjct 348 GGGAAAAGATAGCTTGTTCTTGAA-G-ATTGGAAACATCCACAAGCACATCAAACAAA-T 404
Query 366 CACTATGCAAATTATTG-GCTCCGAGGGTTTGAAGC-AAACAATGA-TAGGAA-ACATGG 421
||| | || || ||| |||||||||||| || | || ||| | || || | ||||
Sbjct 405 AACTCTTCATCTT-TTGTCCTCCGAGGGTTTAAAACGGAA-AAT-ATTA-AAAGATATGG 460
Query 422 ACAAAGCT-ACCCGCGACCATTTTAGATT-GAAGGCT-AGCCAGGGGAGCTTCAATGTT- 477
|| | | || ||||| ||| |||| || ||| ||| | || || || || |||||
Sbjct 461 ACCGTG-TGACACGCGAGCATCTTAG-TTCGAAAGCTAAAACA-GGAAGATTGGATGTTA 517
Query 478 CGTAAAGAAG-TTGAAAACTTGATTGTGGCGTACATGACACCAAAGCTGATAAGTAACCT 536
| | | || || |||| ||||| | || || ||||||| ||| |||| ||||| ||
Sbjct 518 AG-GACGCAGTTTCAAAA-TTGATAATAGCCCACTTGACACCTAAGATGATGAGTAATCT 575
Query 537 TAAACCAGAGACGCAATCAAAGCTTATAGATAA-TCTCAACGCCTTCAATCTTGATTGGT 595
|||||| |||| ||| |||||||||| | || | | || ||||||| | |||||||||
Sbjct 576 CAAACCACAGACTCAAGCAAAGCTTAT-GGGAATTTTTAAGGCCTTCACTTTTGATTGGT 634
Query 596 TTCAGTCCTTCTTTAGTCTCTCTTCTTGGAAAGCTCTCAT-CAA-AGTCCTCAAGTCACG 653
||| | | | || | | ||||| | |||| | |||| | ||| | ||| | || |
Sbjct 635 TTCGGACATCCTATCTTATCTCTGCCGGGAAGGGTCTC-TACAACA-CCCTTTGGGCATG 692
Query 654 CGGAGAAGCGATTCAG-GTGATGAAA-GACGT-TCTCAGTATGA-GAAGAGA-GTCACGA 708
| |||| | ||| | | | ||| ||| || | | | | |||| ||| | | ||| ||
Sbjct 693 CCGAGAGGGGATGC-GAGAGAT-AAAGGATATATAT-ACAATGAGGAA-A-ACGTC-TGA 746
Query 709 -GAGAAGCAAGAAGACTTACTCAACACGTTGC--TAGAAGAACT-GGACAAAGAAAGTAG 764
|||||| | || ||||| ||||||||| || |||||| | | || |||| || ||
Sbjct 747 GGAGAAGTACGATGACTTCCTCAACACG--GCAATAGAAG-AGTCAGAGAAAG-CAGGAG 802
Query 765 CA-TT-TTCG-ACCAAGGAT-CCGCTACAAACCTCATC-TT--CCTTCTGGCAT-TCGTC 816
| || || | || || || | || || ||||||| || |||| | ||| | |||
Sbjct 803 -AGTTATT-GAACGAA-AATGCAATTATAACCCTCATCTTTACCCTT-T--CATGT-GTC 855
Query 817 GC-GAGAGA-AGGTACCTC-CAGTTGTA-CTGCTTTGGCCGTGAAATTCATA-TCCAAAG 871
| | ||| | ||||| || | | ||| ||||| ||||||||| || | |||
Sbjct 856 ACTCA-AGATA-CCACCTCAAAGGCG-ATTTGC-TTGGCTGTGAAATTCCTATTGGAAA- 910
Query 872 ACCCGAAAGTGCTTGCAGAGCTCAAGCGTGAGCATAAGGCAATTGTAGACAA-CAGAAAA 930
|||| ||||| || |||||| | ||| || ||| ||| || | || || |||| ||
Sbjct 911 ACCCAAAAGTTCTCGCAGAGTTAAAGAAAGAACATGAGGTGATCCTTGA-AAGCAGAGAA 969
Query 931 GA-TAAGAAAGCTGGAGTTAGC-TGGGAAGAATACACACACAACATGACTTTCACAAACA 988
|| ||| ||| |||||||| | ||||||||||||| |||||| ||||||||||| ||||
Sbjct 970 GACAAAG-AAGGTGGAGTTA-CTTGGGAAGAATACAGACACAAGATGACTTTCACCAACA 1027
Query 989 TGGTTATCAATGAGTCGCTTCGCCTGTCAAACACGACCCCTTTATTGTTTCGAAAGGCAC 1048
|||||||||||||||| ||||| | ||||| | | ||| | || ||| |||| ||
Sbjct 1028 TGGTTATCAATGAGTCTCTTCGAATAACAAACTTGGCTCCTATGTTATTTAGAAAAGCGG 1087
Query 1049 TGCACGATGTTGAGATCAAAGGCAAGTACTACTTGGAAAGATATACAATTCCGGCTGGTT 1108
| | ||||| || |||||||| | ||| || | ||||| || ||||
Sbjct 1088 TAAAGGATGTGGAAATCAAAGG--A-TAC-AC-------------C-ATTCCAGCAGGTT 1129
Query 1109 GGATTGTGGCA-G-TTGCACCTTCAGCGGTTCATTATGATCCTACAAA-CTATGAGAACC 1165
|||| || | | | || |||||||| |||||||| ||||||| ||| |||||| ||||
Sbjct 1130 GGATAGT-G-ATGATTATACCTTCAGTGGTTCATTTTGATCCT-GAAATCTATGAAAACC 1186
Query 1166 CATTTGAGTTTAATCCATGGAGATGGGAGGGGAAAGAAATGACTCGGG--GG-TCTAAAA 1222
| ||||||||||||||||||||||||||||||||||| || | ||| || |||||||
Sbjct 1187 CTTTTGAGTTTAATCCATGGAGATGGGAGGGGAAAGAGTTG-C--GGGCTGGATCTAAAA 1243
Query 1223 CGTTCATGGCGTTTGGAA 1240
||||||||| ||||||||
Sbjct 1244 CGTTCATGGTGTTTGGAA 1261
> AT1G55940.1 | Symbols: CYP708A1 | cytochrome P450, family 708,
subfamily A, polypeptide 1 | chr1:20922459-20925619 REVERSE
LENGTH=2052
Length=2052
Score = 115 bits (62), Expect = 1e-24
Identities = 127/156 (81%), Gaps = 14/156 (9%)
Strand=Plus/Plus
Query 1090 TATACAATTCCGGCTGGTTGGATTG---TGGCAGTTGCACCTTCAGCGGTTCATTATGAT 1146
||||||||||| || || ||||||| ||| ||| || | || | ||||||||||
Sbjct 1612 TATACAATTCCAGCAGGATGGATTGTATTGGTGGTTCCATC-TCTTC--TTCATTATGAC 1668
Query 1147 CCTACAAA-CTATG-AGAACCCATTTGAGTTTAATCCATGGAGATGGGAGGGGAAAGAAA 1204
||| |||| ||||| | || |||| ||||||||||||||||||||||||||||||||||
Sbjct 1669 CCT-CAAATCTATGAACAA-CCATGTGAGTTTAATCCATGGAGATGGGAGGGGAAAGAAT 1726
Query 1205 TGAC--TCGGGGGTCTAAAACGTTCATGGCGTTTGG 1238
|| | || || |||||||||||||||||||||||
Sbjct 1727 TG-CTTTC-TGGCTCTAAAACGTTCATGGCGTTTGG 1760
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 66465521580
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5