BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg333607
Length=1587
Score E
Sequences producing significant alignments: (Bits) Value
AT1G02810.1 | Symbols: | Plant invertase/pectin methylesterase... 1748 0.0
AT4G02330.1 | Symbols: ATPMEPCRB | Plant invertase/pectin methy... 501 8e-141
> AT1G02810.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily | chr1:618265-620480 FORWARD LENGTH=1906
Length=1906
Score = 1748 bits (946), Expect = 0.0
Identities = 1062/1119 (95%), Gaps = 4/1119 (0%)
Strand=Plus/Plus
Query 1 ATGGAATCTCCATTACTCATTCTCATCACACTATCATTCCTTT-TTCAATCAGTTGTTGT 59
|||||||||||| || |||||||||||||||||||||| |||| ||||||||||| |||
Sbjct 20 ATGGAATCTCCAATATTCATTCTCATCACACTATCATT-CTTTCTTCAATCAGTTCTTGC 78
Query 60 TTCTTCACAAACTCTATCAAACTCTTCAACAATCTGCAAAACGACACCGGATCCAAAATA 119
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 79 TTCTTCTCAAACTCTATCAAACTCTTCAACAATCTGCAAAACGACGCCGGATCCAAAGTA 138
Query 120 TTGCAAATCCGTTTTCCCACATAGCCAAGGCAATGTCCAACAATACGGCCGCTTCTCTAT 179
||||||||||||||| |||||||||||||||||||| |||||||||||| | ||||||||
Sbjct 139 TTGCAAATCCGTTTTTCCACATAGCCAAGGCAATGTTCAACAATACGGCTGTTTCTCTAT 198
Query 180 CCGCAAATCGCTATCGCAATCGCGAAAATTCATTCGCACCGTCGATAGATATATCAAACG 239
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 199 CCGCAAATCGCTATCGCAATCGCGAAAATTTATTCGCACCGTCGATAGATATATCAAACG 258
Query 240 CAACGCTCATTTATCTCAACCTGCCGTTATCAGAGCTCTCCAAGATTGCCGTTTTCTCGC 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 259 CAACGCTCATTTATCTCAACCTGCCGTTATCAGAGCTCTCCAAGATTGCCGTTTTCTCGC 318
Query 300 TGGTTTAACAATGGATTACCTTTTAACGTCGTTCGAAACCGTTAACGACACGTCAGCAAA 359
||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 319 CGGTCTAACAATGGATTACCTCTTAACGTCGTTCGAAACCGTTAACGACACGTCAGCAAA 378
Query 360 AGCCTCTTTCAAAACGCTGTCGTTTCCAAAAGCCGATGACATCCAAACGCTTCTTTCCGC 419
| ||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 379 AACCTCTTTCAAACCGCTGTCGTTTCCCAAAGCCGACGACATCCAAACGCTTCTTTCCGC 438
Query 420 GGCGTTGACTAACGAGCAGACGTGTCTTGAAGGACTTACCACCGCCGCTTCTTCTTCCGC 479
|||| ||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct 439 GGCGCTGACTAATGAGCAGACGTGTCTTGAAGGACTTACCACGGCCGCTTCTTATTCCGC 498
Query 480 CACGTGGACTGTAAGAAACGGCGTCGCTTTACCTCTCGTTAATGACACGAAGCTCTTGGG 539
||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||
Sbjct 499 CACGTGGACTGTAAGAACCGGCGTCGCTTTGCCTCTCGTCAATGACACGAAGCTCTTGGG 558
Query 540 CGTCTCACTCGCTCTCTTCACCAAAGGTTGGGTTCCAAAGAAGAAGAAACGAGCCGGGTT 599
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 559 CGTCTCACTCGCTCTCTTCACCAAAGGTTGGGTTCCAAAGAAGAAGAAACGGGCCGGGTT 618
Query 600 TGCTTGGGCCCAACCGAGATCCGGTTCATCGACCCACACTAAACCGTACCGTCTGTTCCG 659
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct 619 TGCTTGGGCCCAACCGAGATCCGGTTCATCGACCCACACTAAACCATTCCGTCTGTTCCG 678
Query 660 TAACGGAGCTCTACCGTTAAAGATGACGGAAAAAACAAAAGCCGTTTACGAGTCACTCAG 719
||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||
Sbjct 679 TAACGGAGCTCTACCGTTAAAGATGACAGAGAAAACAAAAGCGGTTTACGAGTCACTCAG 738
Query 720 CAGAAGAAAACTCTCCGAAGGTGACGGTAACGGTGATGGTGACGACGGAAGCATGGTTCT 779
||||||||||||| |||| |||||| ||||||||||||| ||||||||||||||||||||
Sbjct 739 CAGAAGAAAACTCGCCGACGGTGACAGTAACGGTGATGGAGACGACGGAAGCATGGTTCT 798
Query 780 GATAAGCGATATCGTCACCGTGAGCCAAGATGGAACAGGAAATTTCACCAACATCACCGC 839
||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 799 GATAAGCGATATCGTTACCGTGAGCCAAGACGGAACAGGAAATTTCACCAACATCACGGC 858
Query 840 AGCTGTAGCGGCGGCGCCAAATAACACAGACGGAAGCGCCGGTTTCTTCTTGATCTACGT 899
|||||||||||||||||| || ||||| |||||||||||||||||||| |||||||| ||
Sbjct 859 AGCTGTAGCGGCGGCGCCGAACAACACCGACGGAAGCGCCGGTTTCTTTTTGATCTATGT 918
Query 900 GACGGCGGGAATCTACGAAGAGTATATCTCGATCGCGAAGAATAAAAGGTACATGATGAT 959
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 919 GACGGCGGGAATCTACGAAGAGTATATCTCAATCGCGAAGAACAAAAGGTACATGATGAT 978
Query 960 GATCGGCGACGGGATTAATCAGACGGTGGTCACCGGAAACAGAAGCGTCGTCGACGGTTG 1019
||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 979 GATAGGTGACGGGATTAATCAGACGGTGGTCACCGGAAATAGAAGCGTCGTCGACGGTTG 1038
Query 1020 GACTACTTTTAACTCCGCCACATTTGCTGTGACAGCACCGAACTTTGTTGCGGTGAACAT 1079
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1039 GACTACTTTCAATTCCGCCACATTTGCTGTGACAGCACCGAACTTTGTTGCGGTGAACAT 1098
Query 1080 AACATTCCGGAACACGGCGGGACCGGAGAA--ACCAGGC 1116
||| |||||||||||||| ||||||||||| |||||||
Sbjct 1099 AACGTTCCGGAACACGGCCGGACCGGAGAAGCACCAGGC 1137
Score = 684 bits (370), Expect = 0.0
Identities = 446/483 (92%), Gaps = 3/483 (1%)
Strand=Plus/Plus
Query 1107 GAAAC-CAGGC-GTGGTATTTCAGAATTGTAATTTATATCCGAGAAAACCAATGCCGAAC 1164
||||| | ||| || || ||||| || ||||||||||| ||||| ||||| ||||| ||
Sbjct 1278 GAAACGC-GGCAGTTGTGTTTCAAAACTGTAATTTATACCCGAGGAAACCGATGCCAAAT 1336
Query 1165 CAGTTCAATGCCATCACCGCACAAGGCCGGTCTGATCCGAACCAGAACACAGGTACGTCG 1224
||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| ||
Sbjct 1337 CAGTTCAATGCTATCACCGCCCAAGGCCGGTCTGATCCGAACCAGAACACTGGTACATCA 1396
Query 1225 ATCCAAAACTGTACGATTAAGCCCGCTGATGATCTTGTTTCGAGTAACTATACGGTTAGA 1284
||||||||||||||||||||||| || |||||||||||||||||||||||||| |||| |
Sbjct 1397 ATCCAAAACTGTACGATTAAGCCGGCGGATGATCTTGTTTCGAGTAACTATACAGTTAAA 1456
Query 1285 ACGTATTTGGGTCGACCCTGGAAAGAGTATTCACGGACGGTGTACATGCAATCGTACATA 1344
||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||
Sbjct 1457 ACGTATTTGGGTCGACCGTGGAAAGAGTATTCAAGGACGGTTTACATGCAATCGTACATT 1516
Query 1345 GACGGTTTTGTTGAACCGGTTGGTTGGAGAGAGTGGAACGGTGATTTTGCGTTAAGTACA 1404
|| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1517 GATGGTTTCGTTGAACCGGTTGGTTGGAGAGAATGGAACGGTGATTTTGCGTTAAGTACA 1576
Query 1405 TTGTACTATGCAGAGTATAACAATACCGGACCTGGTTCAAACACTACAAACCGGGTTACA 1464
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 1577 TTGTACTATGCAGAGTATAACAATACCGGACCGGGCTCAAACACTACAAACCGGGTTACA 1636
Query 1465 TGGCCTGGTTACCACGTGATTAATTCGACTGATGCAGCTAATTTCACGGTCACTGGTTTA 1524
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1637 TGGCCTGGTTACCACGTGATTAATTCCACTGATGCAGCTAATTTCACGGTCACTGGTTTA 1696
Query 1525 TTCATCGAAGATGATTGGATTTGGAAAACTGGAGTGCCTTATACCAGCGGTTTAATTTCA 1584
|| ||||||| ||||||||||||||| || ||||||||||| ||||||||| ||||||||
Sbjct 1697 TTTATCGAAGCTGATTGGATTTGGAAGACAGGAGTGCCTTACACCAGCGGTCTAATTTCA 1756
Query 1585 TAG 1587
|||
Sbjct 1757 TAG 1759
> AT4G02330.1 | Symbols: ATPMEPCRB | Plant invertase/pectin methylesterase
inhibitor superfamily | chr4:1032413-1035037 FORWARD
LENGTH=1897
Length=1897
Score = 501 bits (271), Expect = 8e-141
Identities = 821/1074 (76%), Gaps = 88/1074 (8%)
Strand=Plus/Plus
Query 76 TCAAACTC-T--TCAACAATCTGCAAAACGACACCGGATCCAAAATAT-TGCAAATCCGT 131
|||||||| | ||||| || |||||||| ||||| |||||||||| | |||||||| ||
Sbjct 148 TCAAACTCTTCATCAACCATATGCAAAACAACACCCGATCCAAAAT-TCTGCAAATCAGT 206
Query 132 TTTCCCAC--ATAGC-CAAGGCAATGTCCAAC-AATACGGCCGCTTCTCTATCCGCAAAT 187
||||||| | | | |||||| | || | | |||||||||||||||| |||||||||
Sbjct 207 GTTCCCACAAACATCTCAAGGCGACGTTC-GCGAATACGGCCGCTTCTCCCTCCGCAAAT 265
Query 188 CGCTATCGCAATCGCGAAAATTCATTCGCACCGTCGATAGATATATCAAACGCAACGCT- 246
||||| |||||||||| ||||||| |||||| | || ||||| ||||||||||| |
Sbjct 266 CGCTAACGCAATCGCGGAAATTCACACGCACCATTGACAGATACCTCAAACGCAACAATG 325
Query 247 CA-T-TTATCTCAA-CCTGCCGTTATCAGAGCTCTCCAAGATTGCCGTTTTCTCGCTGGT 303
|| | ||||||||| || |||| | | ||||||||||||| ||||||| || || |
Sbjct 326 CACTATTATCTCAATCC-GCCG-T-T-GGAGCTCTCCAAGACTGCCGTTACCTAGCAAGC 381
Query 304 TTAACAATGGATTACCTTTTAACGTCGTTCGAAACCGTTAACGACACGTCAGCAAAAGCC 363
| |||| || || || |||| |||||||| | || | | | | | | || | |
Sbjct 382 CTCACAACAGACTATCTCATAACATCGTTCGAGA-CGGT--C-A-A--T-ATCACTA-CA 432
Query 364 TCTTTCAAAACGCTGTCG-TTTCCAAAAGCCGATGACATCCAAACGCTTCTTTCCGCGGC 422
|| | ||||||| ||||| ||||| |||||||| || |||||||| ||||| ||||||||
Sbjct 433 TCATCCAAAACGTTGTCGTTTTCC-AAAGCCGACGAAATCCAAACACTTCTCTCCGCGGC 491
Query 423 GTTGACTAACGAGCAGACGTGTCTTGAAGGACTTACCACCGCCGCTTCTTCTTCCGCCAC 482
|||||||||||||| || |||||||| ||| | | |||||||||||| |||| ||
Sbjct 492 TTTGACTAACGAGCAAACATGTCTTGATGGAATCAACACCGCCGCTTCCTCTT----CA- 546
Query 483 GTGGACTGTAAGAAACGGCGTCGCTTTACCTCTCGTTAATGACACGAAGCTCTTGGGCGT 542
|||||| || ||||||| ||||| || ||||| | || |||||||||||||| | ||
Sbjct 547 -TGGACTATACGAAACGGTGTCGCATTGCCTCTAATCAACGACACGAAGCTCTTTAGTGT 605
Query 543 CTCACTCGC-TCTCTTCACCAAAGGTTGGGTTCCAAAGAAGAAGAAAC--G-AGCCGGGT 598
||| ||||| | | |||||||||||||||||||||||||||||||||| | |||| | |
Sbjct 606 CTCGCTCGCAT-TATTCACCAAAGGTTGGGTTCCAAAGAAGAAGAAACAAGTAGCCAG-T 663
Query 599 T--TGCTTGGGCCCAACCGA-GATC-CGGTTCATCGACCCACACTAAACCGTACCGTC-T 653
| | |||||||||| || | || | | | || | | ||||| ||||| | ||||| |
Sbjct 664 TACT-CTTGGGCCCATCCAAAGAACAC--T-CA-C-AGTCACACAAAACCATTCCGTCAT 717
Query 654 GTTCCGTAACGGAGCTCTACCGTTAAAGATGACGGAAAAAACAAAAGCCGTTTACGAGTC 713
||||||||||||||| |||||||||||||||||||| | ||| ||||||||||||||
Sbjct 718 -TTCCGTAACGGAGCTTTACCGTTAAAGATGACGGAACACACACGCGCCGTTTACGAGTC 776
Query 714 ACTCAGCAGAAGAAAACTCTCCGAAGGTGACGGTAACGGTGATGGTGA-CGACGGAAGCA 772
| ||||| || |||||| | || | ||| ||| ||| | | | | |||| ||
Sbjct 777 TTTAAGCAGGAGGAAACTCGCTGACG---ACGATAA---TGACG-TAAAC-ACGGT-GC- 826
Query 773 TGGTTCTGATAAGCGATATCGTCACCGTGAGCCAAGATGGAACAGGAAATTTCACCAACA 832
| | | ||||||| ||||| || |||| |||| | ||||| || |||||||| | ||
Sbjct 827 T--T---G-TAAGCGACATCGTAACGGTGAACCAAAACGGAACGGGGAATTTCACGACCA 880
Query 833 TCACCGCAGCTGT-AGCGGCGGCGCCAAATAACACAGACGGAAGCGCCGGTT-TCTTC-T 889
| || | |||||| | ||||||| ||||| || ||||| | |||||||| | ||| |
Sbjct 881 TAACGGAAGCTGTTAATT-CGGCGCCGAATAAAACTGACGGTACCGCCGGTTAT-TTCGT 938
Query 890 TGATCTACGTGACGGCGGGAATCTACGAAGAGTA--TATCTCGATCGCGAAGAATAAAAG 947
| |||||||||||| | || | || || || | || | ||| || || || |||||
Sbjct 939 T-ATCTACGTGACGTCAGGTGTTTATGAGGAAAACGTAG-T-GATTGCCAAAAACAAAAG 995
Query 948 GTA-CATGATGATGATCGGCGACGGGATTAATCAG-ACGGTGGTCACCGGAAACAG-AAG 1004
|| | | |||||||| || ||||| || || | | |||||||| ||||| ||| | ||
Sbjct 996 ATATC-TAATGATGATTGGTGACGGAATAAACC-GTACGGTGGTTACCGGTAACCGGAAT 1053
Query 1005 CGTCGTCGACGGTTGGACTACTTTTAACTCCGCCACATTTGCTGTGACAGCACCGAACTT 1064
||||||||||||||||| ||||| ||||||||||| |||||||| ||| | ||||||||
Sbjct 1054 -GTCGTCGACGGTTGGACCACTTTCAACTCCGCCACTTTTGCTGTTACATCGCCGAACTT 1112
Query 1065 TGTTGCGGTGAACATAACATTCCGGAACACGGCGGGACCGGAGAA--ACCAGGC 1116
||||| |||||||| || ||||| || || || ||||| ||||| |||||||
Sbjct 1113 CGTTGCCGTGAACATGACTTTCCGAAATACCGCTGGACCAGAGAAGCACCAGGC 1166
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 78363050745
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5