BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg333729
Length=3987
Score E
Sequences producing significant alignments: (Bits) Value
AT1G04090.1 | Symbols: | Plant protein of unknown function (DU... 2743 0.0
AT1G04080.3 | Symbols: PRP39 | Tetratricopeptide repeat (TPR)-l... 1818 0.0
AT5G43950.1 | Symbols: | Plant protein of unknown function (DU... 865 0.0
> AT1G04090.1 | Symbols: | Plant protein of unknown function (DUF946)
| chr1:1057151-1059419 FORWARD LENGTH=1965
Length=1965
Score = 2743 bits (1485), Expect = 0.0
Identities = 1658/1744 (95%), Gaps = 2/1744 (0%)
Strand=Plus/Plus
Query 2244 GGGTTTCGCAAGATCAGAGAAGAATATGTTAGGTTACAAATGTCTCCACTGGAACAATCT 2303
||||||||| ||||||| ||| | ||||| |||||||||||||||||||||||||||||
Sbjct 52 GGGTTTCGCGCGATCAGATAAG-A-ATGTTGGGTTACAAATGTCTCCACTGGAACAATCT 109
Query 2304 TATAGATTTACCGCCATTAAAGGACCCTGAAACCTTCTCTCTTCCTGCTTCCATTCCCCA 2363
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 110 TATAGATTTACCGCCATTAAAGGACCCTGAAACCTTCTCTCTTCCTTCTTCCATTCCCCA 169
Query 2364 TTGGCCTCCAGGTCAAGGCTTTGGCTCTGGAACAATCAATCTCGGCAAATTACAAGTCAT 2423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 170 TTGGCCTCCAGGTCAAGGCTTTGGCTCTGGAACAATCAATCTCGGCAAATTACAAGTCAT 229
Query 2424 CAAAATCACGGATTTTGAATTTATATGGCGATACAGATCCACAGAGAAGAACAAGAGCAT 2483
|||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||
Sbjct 230 CAAAATCACGGATTTTGAATTTATATGGAGATACAGATCCACAGAGAAGAAGAAGAACAT 289
Query 2484 TTCATTCTACAAACCAAAGGGATTGTTTCCTAAAGACTTCCATTGCTTAGGTCATTACTG 2543
|||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 290 TTCATTTTACAAACCAAAGGGATTGTTACCTAAAGACTTCCATTGCTTAGGTCACTACTG 349
Query 2544 TCAATCTGATTCTCATCCTTTGAGAGGTTATCTTCTTGCGGCAAGAGATTTAGTAGATTC 2603
||| ||||||||||||||||||||||||||| | |||||||||||||||||||| |||||
Sbjct 350 TCAGTCTGATTCTCATCCTTTGAGAGGTTATGTACTTGCGGCAAGAGATTTAGTGGATTC 409
Query 2604 ATTAGAACAGGAAGAGAAACCTGCATTAGTGGAACCTGTTGATTTTACTCTTGTCTGGAG 2663
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 410 ATTAGAACAGGTAGAGAAACCTGCATTAGTGGAACCTGTTGATTTTACTCTTGTCTGGAG 469
Query 2664 CTCAAATGATTCAGTAGAAGATGAATGTAGTAGTAAGAGCGAACGCGGTTACTTCTGGTT 2723
|||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct 470 CTCAAATGATTCAGCAGAAAATGAATGTAGTAGTAAGAGCGAATGCGGTTACTTCTGGTT 529
Query 2724 ACCGCAGCCTCCTGAAGGGTATAGATCGATCGGTTTTGTGGTTACAAAGAGTTCTGTGAA 2783
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct 530 ACCGCAGCCTCCTGAAGGGTATAGATCGATCGGTTTTGTGGTTACAAAGACTTCCGTGAA 589
Query 2784 ACCTGAGTTGAATGAAGTTAGATGTGTTAGAGCTGATCTTACTGATAAATGTGAAACCCA 2843
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct 590 ACCTGAGTTGAATGAAGTTAGATGTGTTAGAGCTGATCTTACTGATATATGTGAACCCCA 649
Query 2844 CAATGTCATTGTCACTGCTGTTTCGGAATCTTTAGGTGTTCCTTTGTTTATATGGAGAAC 2903
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 650 CAATGTCATTGTCACTGCTGTTTCAGAATCTTTAGGTGTTCCTTTGTTTATATGGAGAAC 709
Query 2904 TCGGCCTTCAGACCGCGGCATGTGGGGCAGAGGTGTCTCTGCAGGTACTTTCTTCTGCAG 2963
||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||
Sbjct 710 TCGGCCTTCAGACCGAGGAATGTGGGGCAAAGGTGTCTCTGCAGGTACTTTCTTCTGCAG 769
Query 2964 AACTCGGCTTGTTCCTGCTAGAGAAGATATTGGTATCGGTATTGCTTGTCTAAAGAATCT 3023
||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 770 AACTCGGCTTGTTGCTGCTAGAGAAGATCTTGGTATCGGTATTGCTTGTCTAAAGAATCT 829
Query 3024 AGATACGAATGTACACGCGATGCCAAATGTTGATCAGATTCAAGCTTTGATTCAACACTA 3083
|||| || | |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 830 AGATTTGAGTTTACATGCGATGCCAAATGTTGATCAGATTCAAGCTTTGATTCAACACTA 889
Query 3084 TGGTCCTACACTAGTCTTCCATCCTGGTGAAACTTACTTACCTTCTTCTGTTTCGTGGTT 3143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 890 TGGTCCTACACTAGTCTTCCATCCTGGTGAAACTTACTTACCTTCTTCTGTTTCGTGGTT 949
Query 3144 CTTCAAGAATGGTGCAGCTCTCTGCGAGAAGGGAAATCCGATCGATGAACTTATCAATGA 3203
|||||| |||||||||| ||||||||| ||||||||||| ||||| |||| |||| ||||
Sbjct 950 CTTCAAAAATGGTGCAGTTCTCTGCGAAAAGGGAAATCCAATCGAGGAACCTATCGATGA 1009
Query 3204 AAATGGCTCGAATTTGCCTCAAGGAGGAAGCAATGACAAGCAGTTTTGGATTGATTTGCC 3263
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1010 AAATGGTTCGAATTTGCCTCAAGGAGGAAGCAATGACAAGCAGTTTTGGATTGATTTGCC 1069
Query 3264 GTGTGATGATCAACAAAGAGATTTCGTCAAGCGAGGAAACCTTGAAAGTTCGAAACTTTA 3323
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1070 GTGTGATGATCAACAAAGAGATTTCGTCAAGCGAGGAAACCTTGAAAGCTCGAAACTTTA 1129
Query 3324 CATTCACATTAAGCCTGCTCTTGGAGGAACGTTCACGGATCTTGTCTACTGGATCTTCTG 3383
|||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1130 CATTCATATTAAGCCTGCTCTTGGAGGAACGTTCACGGATCTTGTCTTCTGGATCTTCTG 1189
Query 3384 TCCTTTTAATGGACCAGCGACCTTAAAACTAGGACTTGTCGATGTCTCATTGATCAGCAT 3443
||| ||||| |||||||| ||||||||||||||||| |||||| ||||||||||||| ||
Sbjct 1190 TCCATTTAACGGACCAGCAACCTTAAAACTAGGACTCGTCGATATCTCATTGATCAGTAT 1249
Query 3444 CGGCCAACACGTCTGTGATTGGGAACATTTCACTCTCCGAATCAGCAATTTCTCAGGTGA 3503
|||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1250 TGGCCAACACGTCTGCGATTGGGAACATTTCACTCTCCGAATCAGCAATTTCTCTGGTGA 1309
Query 3504 GCTTTACTCAATCTACTTCTCACAACACAGTGGCGGCGAGTGGATCGAAGCTTATGACCT 3563
|||||||||||||||||| || ||||||||||||||||||||||||||||| || |||||
Sbjct 1310 GCTTTACTCAATCTACTTGTCTCAACACAGTGGCGGCGAGTGGATCGAAGCATACGACCT 1369
Query 3564 TGAATTCATTCCCGGAAGCAACAAAGCCGTTGTTTACTCGTCGAAACATGGTCACGCGAG 3623
|||| |||||||||||||||||||||||||||||||||| || |||||||||||||| ||
Sbjct 1370 TGAAATCATTCCCGGAAGCAACAAAGCCGTTGTTTACTCTTCAAAACATGGTCACGCAAG 1429
Query 3624 CTTTCCTAAGGCTGGGACTTACTTACAGGGATCGACAATGCTTGGGATTGGGATAAGAAA 3683
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1430 CTTTCCTAGGGCTGGGACTTACTTACAGGGATCGACAATGCTTGGGATTGGGATAAGAAA 1489
Query 3684 CGACACTGCACGTAGTGAAGTCTTCGTAGATTCGAGCTCACGGTACGAGATCATTGCAGC 3743
|||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct 1490 TGACACTGCGCGTAGTGAACTCTTGGTAGATTCGAGCTCACGGTACGAGATCATTGCAGC 1549
Query 3744 AGAGTATCTGGGCGGCAACGGTGTGGTGGCAGAACCGCCATGGCTGCAGTATATGAGAGA 3803
|||||||| |||| ||| ||||| ||||||||||||| ||| ||||||| ||||||||
Sbjct 1550 GGAGTATCTCAGCGGAAACAGTGTGTTGGCAGAACCGCCGTGGTTGCAGTACATGAGAGA 1609
Query 3804 ATGGGGACCAAAGGTTGTCTACGATTCAAGAGAGGAGATAGAAAGATTGGTGAATCGATT 3863
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 1610 ATGGGGACCAAAGGTTGTGTACGATTCAAGAGAGGAGATAGAGAGATTGGTGAATCGATT 1669
Query 3864 TCCGAGGACGGTTAGGGTTTCGCTTGCTACAGTGCTGAGAAAACTTCCGGTGGAATTATC 3923
||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 1670 TCCGAGGACGGTTAGGGTTTCGCTTGCCACAGTGCTTAGAAAACTTCCGGTGGAATTATC 1729
Query 3924 CGGCGAGGAAGGTCCAACGGGACCGAAGGAGAAGAACAATTGGTATGGCGATGAAAGATG 3983
||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||
Sbjct 1730 CGGCGAGGAAGGTCCTACAGGACCAAAGGAGAAGAACAATTGGTATGGCGATGAAAGATG 1789
Query 3984 GTGA 3987
|||
Sbjct 1790 TTGA 1793
> AT1G04080.3 | Symbols: PRP39 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1051312-1056827 FORWARD LENGTH=2963
Length=2963
Score = 1818 bits (984), Expect = 0.0
Identities = 1087/1137 (96%), Gaps = 6/1137 (1%)
Strand=Plus/Plus
Query 1 ATGGGAGACAGTGAGGCCATGGTTTCCGAGGGATACGCTTCTGCTCCATATGGAGATTAT 60
||||| ||||| |||||||||||||||||||| || ||||||||||||||||||| |||
Sbjct 215 ATGGGTGACAGCGAGGCCATGGTTTCCGAGGGTTATACTTCTGCTCCATATGGAGACTAT 274
Query 61 AATGCTTCTGCTGCTACTGTGGAATCGACAGGGCAAGAGACTGCACCAATTGTTGATTCA 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct 275 AATGCTTCTGCTGCTACTGTGGAATCGACCGGGCAAGAGACTGCACCAATTGTTGATGCA 334
Query 121 TCACACTCGGTCAACAATGATTCTGTGGTCAATGGGACTGCGCCAGTTGAGAACGGAAAT 180
|||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| |
Sbjct 335 TCACACTCGGTCAACAATGATTCTTTGGTCAATGGTACTGCGCCAGTTGAGAACGGAAGT 394
Query 181 GCAACAGATAACGTGGCTGTAACTGCTCCAGCAGCGGAGCATGGAGACAATCCTGGCTCT 240
||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct 395 GCAACAGATAATGTGGCTGTGACTGCTCCAGCAGCGGAGCATGGAGACAATACTGGCTCT 454
Query 241 ACTCTCTCACCGGAAGAGGAGCGCTTGTGGAATATTGTAAGGGCTAATTCTTCAGAGTTC 300
|| |||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct 455 ACACTCTCAACGGAAGAGGAGCGCTTGTGGAATATTGTAAGGGCAAATTCTTTAGAGTTT 514
Query 301 AATGCTTGGACTGCCTTGATTGATGAGACGGAGAGGATAGCGCAGGACAATATAGCAAAA 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 515 AATGCTTGGACTGCCTTGATTGATGAGACGGAGAGGATAGCGCAGGACAATATAGCAAAA 574
Query 361 ATCCGGAAGGTCTATGATGCTTTCTTAGCAGAATTTCCTTTGTGTTATGGCTATTGGAAA 420
||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct 575 ATCCGGAAGGTCTATGATGCTTTCTTAGCTGAATTTCCTCTGTGTTATGGCTATTGGAAA 634
Query 421 AAGTTTGCGGATCATGAGGCTCGGGTGGGGGCAATGGACAAAGTCGTAGAGGTTTATGAA 480
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 635 AAGTTTGCCGATCATGAGGCTCGGGTGGGGGCAATGGACAAAGTCGTGGAGGTTTATGAA 694
Query 481 AGAGCAGTGCAGGGAGTTACATATTCAGTGGATATCTGGCTGCATTATTGCACTTTTGCC 540
|||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct 695 AGAGCAGTGCTGGGAGTGACATATTCAGTGGATATCTGGTTGCATTATTGCACTTTTGCC 754
Query 541 ATCAATACATATGGAGATCCAGACACAATCAGAAGGCTTTTTGAACGAGCTTTGGTTTAC 600
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 755 ATCAATACATATGGAGATCCAGAAACGATCAGAAGGCTTTTTGAACGAGCTTTGGTTTAC 814
Query 601 GTTGGAACTGATTTTCTTTCCTCTCCATTGTGGGACAAATACATTGAGTATGAGTACATG 660
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 815 GTTGGAACTGATTTTCTTTCCTCTCCGTTGTGGGACAAATACATTGAGTATGAGTACATG 874
Query 661 CAGCAGGACTGGAGCCGAGTTGCCATGATTTACACCAGAATATTGGAGAATCCAATTCAA 720
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 875 CAGCAGGACTGGAGCCGAGTTGCCTTGATTTACACCAGAATATTGGAGAATCCAATTCAA 934
Query 721 AATCTCGATAGATATTTCAGCAGTTTTAAGGAGCTAGCTGAAACCCGGCCTCTGTCGGAA 780
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 935 AATCTGGATAGATATTTCAGCAGTTTTAAGGAGCTAGCTGAAACACGGCCTCTGTCGGAA 994
Query 781 CTAAGGAGTGCTGAGGAATCCGCAGCTGCTG-T-T-G-T-T-GCTGGTGATGCTTCTGAA 834
||||||||||||||||||||||||||||||| | | | | | ||||||||||||||||||
Sbjct 995 CTAAGGAGTGCTGAGGAATCCGCAGCTGCTGCTGTTGCTGTTGCTGGTGATGCTTCTGAA 1054
Query 835 AGTGCACCATCTGAGTCTGGTGGAAAGGCAGATGAAGGACGATCTCAAGTTGATGGTTCC 894
|||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct 1055 AGTGCAGCATCTGAGTCCGGTGAAAAGGCAGATGAAGGACGATCTCAAGTTGATGGTTCC 1114
Query 895 ACCGAACAATCCCCTAAATTGGAAAGTGCTAGTTCAACTGATCCTGAGGAGTTGAAGAAA 954
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1115 ACCGAACAATCCCCTAAATTGGAAAGTGCTAGTTCAACTGAACCTGAGGAGTTGAAGAAG 1174
Query 955 TATGTTGGCATCAGGGAAGCCATGTACATAAAATCCAAAGAGTTTGAATCTAAAATCATT 1014
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1175 TATGTAGGCATCAGGGAAGCCATGTACATAAAATCGAAAGAGTTTGAATCTAAAATCATT 1234
Query 1015 GGTTATGAAATGGCTATAAGGAGGCCCTATTTCCATGTGCGTCCTCTGAATGTTGCAGAG 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1235 GGTTATGAAATGGCTATAAGGAGGCCCTATTTCCATGTGCGTCCTCTGAATGTCGCAGAA 1294
Query 1075 CTAGAGAATTGGCACAACTATCTAGATTTCATCGAGAGGGATGGAGACTTCAATAAG 1131
|| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 1295 CTGGAGAATTGGCACAACTATCTGGATTTCATTGAGAGGGATGGAGACTTCAATAAG 1351
Score = 1759 bits (952), Expect = 0.0
Identities = 1062/1116 (95%), Gaps = 4/1116 (0%)
Strand=Plus/Plus
Query 1132 GTGGTCAAGTTGTATGAAAGATGTGTGGTTGCCTGTGCAAATTACCCAGGATACTGGATT 1191
||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct 1517 GTGGTCAAGCTGTATGAAAGATGTGTGGTTACCTGTGCAAATTACCCAGAATACTGGATT 1576
Query 1192 CGTTATGTGTCAAAAATGCG-AGCAAGTGGAAGTACGGACCTTGCAGAAAATGCCCTTGC 1250
||||||||| |||| ||| | ||||||||||||| |||||||||||||||||||||||||
Sbjct 1577 CGTTATGTGACAAACATG-GAAGCAAGTGGAAGTGCGGACCTTGCAGAAAATGCCCTTGC 1635
Query 1251 TCGAGCAACTCAAGTCTTTGTGAAGAAACAACCAGAGATTCACCTTTTTGCTGCTCGATT 1310
||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct 1636 TCGAGCAACTCAAGTCTTTGTCAAGAAACAACCAGAGATTCACCTATTTGCTGCTCGATT 1695
Query 1311 AAAAGAGAAGAATGGAGATATAGCTGGTGCTAGAGCTGCATACCAATTAGTGCACTCTGA 1370
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1696 AAAAGAGCAGAATGGAGATATAGCTGGTGCTAGAGCTGCATACCAATTAGTGCACTCTGA 1755
Query 1371 AATTTCTCCCGGACTTCTTGAAGCAGTAATCAAACATGCAAACATGGAACACCGACTAGG 1430
||||||||| ||||||||||||||||||||||| |||||||| |||||| ||||||||||
Sbjct 1756 AATTTCTCCTGGACTTCTTGAAGCAGTAATCAAGCATGCAAATATGGAATACCGACTAGG 1815
Query 1431 TAATCTGGATGATGCTTTCTCTTTGTATGAGCAAGTGATTGCTGTTGAAAAGGGGAAAGA 1490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1816 TAATCTGGATGATGCTTTCTCTTTGTATGAGCAAGTGATTGCTGTTGAAAAGGGGAAAGA 1875
Query 1491 GCATTCCACAATACTGCCGCTGCTGTATGCTCAATATTCAAGGTTTTCATACTTGGTTTC 1550
||||||||||||||||| ||||||||||| || ||||||||||||||||||||||| ||
Sbjct 1876 ACATTCCACAATACTGCCACTGCTGTATGCGCAGTATTCAAGGTTTTCATACTTGGTCTC 1935
Query 1551 CAGGGATACTGAGAAAGCTAGGAGGATTATAGTCGAAGCACTTGACCATGTACAACCGTC 1610
||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1936 CAGGGATGCTGAGAAAGCTAGGAGGATTATTGTCGAAGCACTTGACCATGTACAACCGTC 1995
Query 1611 AAAACCACTCGTGGAATCACTGATTCATTTTGAGACGATTCAGCCACCACCAAGACAGAT 1670
|||||| ||| ||||| ||||||||||||||||| |||||||||||||||||||| ||||
Sbjct 1996 AAAACCTCTCATGGAAGCACTGATTCATTTTGAGGCGATTCAGCCACCACCAAGAGAGAT 2055
Query 1671 TGATTACCTTGAGCCACTTGTAGAGAAAGTTATAAAGCCAGATGCAGATGCCCAGAACAT 1730
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2056 TGATTACCTTGAGCCACTTGTAGAGAAAGTTATAAAGCCAGATGCAGATGCCCAAAACAT 2115
Query 1731 TGCAAGTGCCTCTGAGAGGGAAGAGCTATCCTTAATATATATAGAGTTCCTGGGTATTTT 1790
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2116 TGCAAGTTCCACTGAGAGGGAAGAGCTATCCTTAATATATATAGAGTTCCTGGGTATTTT 2175
Query 1791 TGGTGATGTGGAGGCCATTCATAAAGCGGAAGAGCAACATGTTACACTGTTTTTA-CCTC 1849
||| |||||| || ||||| | ||||||||||| |||||||||| |||| ||||| ||||
Sbjct 2176 TGGAGATGTGAAGTCCATTAAAAAAGCGGAAGATCAACATGTTAAACTG-TTTTATCCTC 2234
Query 1850 ATCGGAGCACGTCAGATCTGAAAAAGCGTAGCGCAGATGATTTTCTCTCATCAGATAGGA 1909
||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2235 ATCGGAGCACGTCGGAGCTGAAAAAGCGTAGCGCAGATGATTTTCTCGCATCAGATAGGA 2294
Query 1910 CGAAAATGGCAAAAACTTACAACGGCACTCCACCTGCTCAGCCAGTATCCAATGCATATC 1969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 CGAAAATGGCAAAAACTTACAACGGCACTCCACCTGCTCAGCCAGTATCCAATGCATATC 2354
Query 1970 CAAATACTCAGGCTCAATGGTCTGGTGGTTATGCTGCGCAACCTCAGACTTGGCCACCAA 2029
||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2355 CAAATGCTCAGGCTCAATGGTCTGGTGGTTATGCTGCGCAGCCTCAGACTTGGCCACCAG 2414
Query 2030 CACAAGCTGCTCCTGCTCAACCGCAGCAATGGAACCCTGCCTACGGTCAACAGGCTGCTT 2089
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2415 CACAAGCTGCTCCTGCTCAACCACAGCAATGGAACCCTGCCTACGGTCAACAGGCTGCTT 2474
Query 2090 ATGGTGCATATGGGGGATATCCTGCTGGCTATACTGCTCCACAGGCACCAACACCTGTGC 2149
|||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 2475 ATGGTGCATATGGGGGATATCCTGCTGGCTATACCGCTCCACAAGCACCAACACCTGTGC 2534
Query 2150 CACAGGCCGCTGCTTATGGCGCCTATCCTGCTCAGACATACCCAACACAGAGTTATGCAC 2209
|||||||||| |||||||| || ||||||||||||||||||||||| |||||||||||||
Sbjct 2535 CACAGGCCGCAGCTTATGGAGCGTATCCTGCTCAGACATACCCAACGCAGAGTTATGCAC 2594
Query 2210 CTCCAGTTGCAGCTGCAGCACCAGCGGCTGCGCCGG 2245
||||||||||||| ||||||||||||||||| ||||
Sbjct 2595 CTCCAGTTGCAGCAGCAGCACCAGCGGCTGCACCGG 2630
> AT5G43950.1 | Symbols: | Plant protein of unknown function (DUF946)
| chr5:17686500-17688668 REVERSE LENGTH=1953
Length=1953
Score = 865 bits (468), Expect = 0.0
Identities = 1362/1776 (77%), Gaps = 132/1776 (7%)
Strand=Plus/Plus
Query 2269 ATGTTAGGTTACAAATGTCTCCACTGGAACAATCTTATAG-ATTTACCGCCATTAAAGGA 2327
||||| || | ||||||||| | ||||||||||| | || || | |||||||| |||||
Sbjct 46 ATGTTTGGATGCAAATGTCTGTATTGGAACAATCTCAAAGAATAT-CCGCCATTGAAGGA 104
Query 2328 CCCTGAAACCTTCTCTCTTCCTGCTTC-CATTCCCCATTGGCCTCCAGGTCAAGGCTTTG 2386
||||||||||||||||| |||||||| | ||||||| |||||| |||||||||||||||
Sbjct 105 ACCTGAAACCTTCTCTCTCCCTGCTTCTC-TTCCCCAGTGGCCTTCAGGTCAAGGCTTTG 163
Query 2387 GCTCT-GGAACAATCAATCTCGGCAAATTACAAGTCATCA-AAATCACGGA-TTTTGAAT 2443
| | | |||| ||||||||| ||| ||||| ||||| || | ||||| | ||||||||
Sbjct 164 G-TTTAGGAAGAATCAATCTAGGCGAATTAGAAGTC-GCAGAGATCAC-AAGTTTTGAAT 220
Query 2444 TTATATGGCGATACAGATC-C-AC-AGAGAAGAACAAGAGCATTTCATTCTACAAACCAA 2500
| ||||||||||| | || | | ||| || || ||||| |||| |||||||||||
Sbjct 221 TCGTATGGCGATACTGCTCTCGTCGAGATAACAAGAAGAGTGTTTCCTTCTACAAACC-- 278
Query 2501 AGGGATTGTTTCCTAAAGACTTCCATTGCTTAGGTCATTACTGTCAATCTGATTCTCATC 2560
| | || ||| |||| |||||||||||||||||||||||||| ||||||||||| |
Sbjct 279 TGACA-AATTACCTGAAGATTTCCATTGCTTAGGTCATTACTGTCAGTCTGATTCTCA-C 336
Query 2561 CT-TTGAGAGGTTATCTTCTTGCGGCAAGA-GATTTAGTAGATTCATTAGAACAGGAAGA 2618
|| |||||||||| |||||||| |||||| | ||| || | || || | |||
Sbjct 337 CTCTTGAGAGGTTTTCTTCTTGTAGCAAGACAAGTTAATA-AGTC-TT----C----AGA 386
Query 2619 GAAACCTGCA-TTAGTGGAACCTGTTGATTTTACTCTT-GTCTGGAGCTCAAATGATTCA 2676
| |||||| || ||| |||| | |||| ||| || |||||||||||||||||||
Sbjct 387 G---CCTGCACTT-GTGCAACCACTCGATTATAC-ATTGGTCTGGAGCTCAAATGATT-- 439
Query 2677 GTAGAAGATGAATGTAGTAGT-AAGAGCGAA-CG--CGGTTACTTCTGGTTACCGCAGCC 2732
| | | ||| | || || || |||||| || ||||||||||||||||||||||||
Sbjct 440 -T--ATCA-GAA-G-AG-CGTCAA-AGCGAATCGTACGGTTACTTCTGGTTACCGCAGCC 491
Query 2733 TCCTGAAGGGTATAGATCGATCGGTT-TTGTGGTTACAAAGAGTTCTGTGAAACCTGAGT 2791
|||| ||||||||| | ||||||| | || ||||||||| |||| | | ||||||||| |
Sbjct 492 TCCTCAAGGGTATAAACCGATCGGATATT-TGGTTACAACGAGTCCCGCGAAACCTGAAT 550
Query 2792 TGAATGAAGTTAGATGTGTTAGAGCTGATCTTACTGATAAATGTGAAACCCACAATGTCA 2851
|| || ||||| |||| ||| |||||||||| || ||||| |||||| | || || ||||
Sbjct 551 TGGATCAAGTTCGATGCGTTCGAGCTGATCTAACCGATAAGTGTGAAGCACATAAAGTCA 610
Query 2852 TTGTCACTGCTGTTTCGGAATCTTTAGGTGTTCCTTTGTTTATATGGAGAACTCGGCCTT 2911
| |||| || | ||||| |||||| | ||||| |||||||||||| ||| | || |
Sbjct 611 TAATCACCGCAATATCGGATTCTTTAAGCATTCCTATGTTTATATGGAAAACAAGACCAT 670
Query 2912 CAGACCGCGGCATGTGGGGCAGAGGTGTCTCTGCAGGTACTTTCTTCTGCAGAACTCGGC 2971
| |||||||| ||| | |||| ||| ||||| ||||||| |||||||||| |||||
Sbjct 671 CCGACCGCGGAATGCGTGGCAAAGGAGTCTCAACAGGTACATTCTTCTGCACAACTCAA- 729
Query 2972 TTGTTCCTGCTAGAGAAGAT-AT-TG-GTATCGGTATTGCTTGTCTAAAGAATCTAGATA 3028
| |||| | ||||||| || | ||| | || || |||||||| || || |||
Sbjct 730 TCC--CCTG--A-AGAAGATCATCTCAGTA-CA--ATCGCGTGTCTAAAAAACCTCGATT 781
Query 3029 CGAATGTACACGCGATGCCAAATGTTGATCAGATTCAAGCTTTGATTCAACACTATGGTC 3088
||| | ||||||| |||||||| | || || || || ||| ||||||||||||||||||
Sbjct 782 CGAGTTTACACGCAATGCCAAACATCGAACAAATCCATGCTATGATTCAACACTATGGTC 841
Query 3089 CTACACTAGT-CTTCCATCCTGGTGAAA-CTTACTTACCTTCTTCTGTTTCGTGGTTCTT 3146
| | | | | |||||||||| |||| || || |||||||||| || || ||||||||
Sbjct 842 CAAGAGTT-TACTTCCATCCTAATGAAGTCT-ACCTACCTTCTTCAGTCTCATGGTTCTT 899
Query 3147 CAAGAATGGTGCAGCTCTC-TGCGAG-AAGGGAAAT-CC---G--ATCGA---TGAACTT 3195
||| || |||||| |||| ||| || || |||| || | ||| | ||||| |
Sbjct 900 CAAAAACGGTGCA-CTCTTATGC-AGCAATTCAAATTCCTCTGTTATCAACAATGAACCT 957
Query 3196 ATCA-ATGAAAATGGCTCGAATTTGCCTCAAGGAGGAAGCAATGACAAGCAGTT-TTGGA 3253
|| | | |||| ||||||||| | ||||| || |||| ||| || |||| | | |||||
Sbjct 958 AT-AGACGAAACCGGCTCGAATCTACCTCATGGCGGAACCAACGATAAGC-GATATTGGA 1015
Query 3254 TTGATTTGCCGTGTGAT-GATCAACAAAGA-G--ATTTCGTCAAGCGAGGAAACCTTGAA 3309
| ||||| ||| | | |||||||||||| | | ||| |||| ||||| | || ||
Sbjct 1016 TCGATTTACCGA-TCAACGATCAACAAAGACGCGAATTCATCAAACGAGGCGATCTCGAG 1074
Query 3310 AGTTCGAAACTTTACATTCACATTAAGCCTGC-TCTTGGAGGAACGTTCACGGATCTTGT 3368
|| ||||| |||||| ||||| ||||||| || | ||||||||||||| ||||||||||
Sbjct 1075 AGCTCGAAGCTTTACGTTCACGTTAAGCCAGCAT-TTGGAGGAACGTTTACGGATCTTG- 1132
Query 3369 C-TACTGGATCTTCTGTCCTTTTAATGGACCAGCGAC-CTTAAAACTAGGACTTGTCGAT 3426
| | ||||| || ||||| || || ||||||||||| || || ||||| ||| | |||
Sbjct 1133 CGTTTTGGATTTTTTGTCCGTTCAACGGACCAGCGACTCTGAAG-CTAGGGCTTATGGAT 1191
Query 3427 GTCTCATTGA-TCAG-CATCGGCCAACACGTCTGTGATTGGGAACATTTCACTCTCCGAA 3484
|||| ||| | | | | || |||||||| |||||||||||||||||||| || |||
Sbjct 1192 CTCTCGTTGGCTAAAAC-T-GGTCAACACGTTTGTGATTGGGAACATTTCACAGTCAGAA 1249
Query 3485 TCAGCAATTTCTCAGGTGAGCTTTACTCAATCTACTTCTCACAACACAGTGGCGGCGAGT 3544
|||| |||||||| || ||||||||||| || |||||||| |||||||||||||||||||
Sbjct 1250 TCAGTAATTTCTCCGGCGAGCTTTACTCTATTTACTTCTCTCAACACAGTGGCGGCGAGT 1309
Query 3545 GGATCGAAGCTTATGACCTTGAATTCATTCCCGGAAGCAACAAAGCCGTTGTTTACTCGT 3604
||||| || || | | ||||||||| || ||||| |||||||| || || |||||||
Sbjct 1310 GGATCAAACCTGAAAATCTTGAATTCGTTGAAGGAAGTAACAAAGCTGTGGTGTACTCGT 1369
Query 3605 CGAA-ACATGGTCACGCGAGCTTTCCTAAGGCTGGGACT-TACTTACAGGGATC-GACAA 3661
|||| | ||||||||||||||||| ||||| |||| | | || ||||| ||||| | |
Sbjct 1370 CGAAGA-ATGGTCACGCGAGCTTTTCTAAGTCTGGAA-TGTATTTACAAGGATCTG-CTT 1426
Query 3662 TGCTTGGGATTGGGATAAGAAACGACACTGC-ACGTAGTGAAGTCTTCGTAGATTCGAGC 3720
||||||| |||||||| || || || | || | | ||||| | || || ||||||||
Sbjct 1427 TGCTTGGAATTGGGATTAGGAATGATTCAGCGAAG-AGTGATTTGTTTGTTGATTCGAGT 1485
Query 3721 TC-ACGGTACGAGATCATTGCAGCAGAGTATCTGGGCGGCAACGGTGTGGTGGCAGAACC 3779
| | | || ||||| |||| || |||||||| | || | ||||| | ||| || ||
Sbjct 1486 TTGAAG-TATGAGATTGTTGCGGCGGAGTATCTCAGAGG-AGCGGTG-G-TGG-AG--CC 1538
Query 3780 GCCATGGCTGCAG-T-ATATGAGAGAATGGGGACCAAAGGTTGTCTACGATTCAAGAGAG 3837
||| ||| | || | |||||||||| |||||||| ||| |||| || |||| ||| |
Sbjct 1539 GCCGTGGTT--AGGTTATATGAGAGAGTGGGGACCGAAGATTGTGTATAATTCGAGATCG 1596
Query 3838 GAGATAGA-AAGATTGG-TGAATCGATTTCCGA-GGACGGTT-AGGGT-TTCGCTTGCTA 3892
||||| || ||| ||| |||| ||||| || | ||| |||| || | || | ||| |
Sbjct 1597 GAGATTGAGAAG-TTGAATGAA-CGATTGCC-ATGGA-GGTTGAGA-TCTTGGGTTGATG 1651
Query 3893 CAGTGCTGAGAAA-ACTTCCGGTGGAATTATCCGGCGAGGAAGGTCCAACGGGACCGAAG 3951
| ||| |||| || | ||||||| |||||||||||||||||||| || |||||||| |||
Sbjct 1652 CTGTGTTGAGGAAGA-TTCCGGTAGAATTATCCGGCGAGGAAGGACCGACGGGACCTAAG 1710
Query 3952 GAGAAGAACAATTGGTATGGCGATGAAAGATGGTGA 3987
|||||||| ||||||| ||| ||||| || ||||||
Sbjct 1711 GAGAAGAATAATTGGTTTGGTGATGAGAGGTGGTGA 1746
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 198661094280
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5