BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg334053

Length=414
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT1G07645.1 | Symbols: ATDSI-1VOC, DSI-1VOC | dessication-induc...   665    0.0  


> AT1G07645.1 | Symbols: ATDSI-1VOC, DSI-1VOC | dessication-induced 
1VOC superfamily protein | chr1:2367437-2368385 REVERSE 
LENGTH=625
Length=625

 Score =  665 bits (360),  Expect = 0.0
 Identities = 396/414 (96%), Gaps = 0/414 (0%)
 Strand=Plus/Plus

Query  1    ATGGCAGCGAATATGATGAGACCGGCGTTTGCTTACACTGTTGTGTATGTGAAGGACGTA  60
            |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct  37   ATGGCAGCTAATATGATGAGACCGGCGTTTGCTTACACTGTTGTGTACGTGAAGGACGTA  96

Query  61   GCTAAATCCGTAGAATTCTACTCTAGAGCTTTTGGTCACAACGTCCGTCGTCTTGACGAG  120
            |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct  97   GCTAAATCTGTAGAATTCTACTCTAGAGCTTTTGGTCACAACGTCCGTCGTCTTGACGAA  156

Query  121  TCCCACAGGTGGGGGGAGCTAGAGAGCGGGCAAACGACAATAGCGTTCACACCACTACAC  180
            ||||||||||||||||||||||||||||||||||| || |||||||||||||| || |||
Sbjct  157  TCCCACAGGTGGGGGGAGCTAGAGAGCGGGCAAACCACGATAGCGTTCACACCGCTTCAC  216

Query  181  CAGCATGAGACCGACGACCTAACCGGGAAGGTTCAGGCTACGCAGTCAGCCCGTGAAAGA  240
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct  217  CAGCATGAGACCGACGACCTAACCGGGAAGGTTCAGGCTACGCAGTCAGCACGTGAAAGA  276

Query  241  GCACCCATCGAAGTCTGCTTCTGTTACCCCGATGTTGATGCCGCTTTCAAGAGAGCGGTG  300
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct  277  GCACCCATCGAAGTCTGCTTCTGTTACCCTGATGTTGATGCCGCTTTCAAGAGAGCGGTG  336

Query  301  GAGAACGGTGCGGTGACTGTGAGCGAGCCGGAAGACAAAGAATGGGGTCAGAAGGTTGGA  360
            ||||||||||||| | | |||||| |||||||||| ||||||||||| ||||||||||||
Sbjct  337  GAGAACGGTGCGGAGGCAGTGAGCAAGCCGGAAGATAAAGAATGGGGGCAGAAGGTTGGA  396

Query  361  TACGTGAGAGACATTGACGGCATCGTTGTACGCATCGGAAGCCACGTTAAGTGA  414
            |||||| |||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct  397  TACGTGCGAGACATTGACGGCATTGTTGTACGCATCGGAAGCCACGTTAAGTGA  450



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 19604422110


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5