BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg334507
Length=1380
Score E
Sequences producing significant alignments: (Bits) Value
AT1G12140.1 | Symbols: FMO GS-OX5 | flavin-monooxygenase glucos... 2228 0.0
AT1G62620.1 | Symbols: | Flavin-binding monooxygenase family p... 209 5e-53
AT1G63370.1 | Symbols: | Flavin-binding monooxygenase family p... 204 2e-51
AT1G62600.1 | Symbols: | Flavin-binding monooxygenase family p... 171 2e-41
> AT1G12140.1 | Symbols: FMO GS-OX5 | flavin-monooxygenase glucosinolate
S-oxygenase 5 | chr1:4121369-4124595 FORWARD LENGTH=2146
Length=2146
Score = 2228 bits (1206), Expect = 0.0
Identities = 1324/1382 (96%), Gaps = 4/1382 (0%)
Strand=Plus/Plus
Query 1 ATGGCACCGGCACGAAGACGAGTCAACTCACTCCACGTGGCAGTGATCGGAGCCGGAGCC 60
|||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct 18 ATGGCACCAGCACGAACCCGAGTCAACTCACTCAACGTGGCAGTGATCGGAGCCGGAGCC 77
Query 61 GCAGGACTCGTAGCTGCACGAGAGCTACGCCGCGAGAATCACTCCGTCGTCGTTTTCGAA 120
|| ||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||
Sbjct 78 GCCGGACTCGTAGCTGCAAGAGAGCTCCGCCGCGAGAATCACACCGTCGTCGTTTTCGAA 137
Query 121 CGTGACTCAAAAGTCGGAGGTCTCTGGGTATACACACCTAACAGCGAACCAGACCCACTT 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 138 CGTGACTCAAAAGTCGGAGGTCTCTGGGTATACACACCTAACAGCGAACCAGACCCGCTT 197
Query 181 AGTCTCGATCCAAACCGAACCATCGTCCACTCAAGCGTCTACGATTCTCTTCGAACCAAT 240
|| |||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||
Sbjct 198 AGCCTCGATCCAAACCGAACCATCGTCCATTCAAGCGTCTATGATTCTCTCCGAACCAAT 257
Query 241 CTCCCACGAGAGTGCATGGGTTACAGAGACTTCCCCTTCGTGCCTCGACCTGAAGATGAC 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 258 CTCCCACGAGAGTGCATGGGTTACAGAGACTTCCCCTTCGTGCCTCGACCTGAAGATGAC 317
Query 301 GAATCAAGAGAC-CAGAGAAGGTACCCTAGTCACAGAGAAGTTCTTGCTTACCTTGAAGA 359
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 318 GAATCAAGAGACTC-GAGAAGGTACCCTAGTCACAGAGAAGTTCTTGCTTACCTTGAAGA 376
Query 360 CTTCGCTAGAGAATTCAAACTTGTGGAGATGGTTCGATTTAAGACCGAAGTAGTTGTTGT 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 377 CTTCGCTAGAGAATTCAAACTTGTGGAGATGGTTCGATTTAAGACCGAAGTAGTTCTTGT 436
Query 420 TGAGCCTGAAGGTCAA-AAATGGAAGGTTCAATCCAAAAATTCAGATGGGATCTCTAAAG 478
|||||||||| | || ||||||| |||||||||||||||||||||||||||||| ||||
Sbjct 437 CGAGCCTGAAGAT-AAGAAATGGAGGGTTCAATCCAAAAATTCAGATGGGATCTCCAAAG 495
Query 479 ATGAGATCTTTGATGCTGTTGTTGTTTGTAATGGACATTATACAGAACCTAGAGTTGCTC 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 496 ATGAGATCTTTGATGCTGTTGTTGTTTGTAATGGACATTATACAGAACCTAGAGTTGCTC 555
Query 539 ATGTTCCTGGTATAGATTCATGGCCAGGGAAGCAGATTCATAGCCACAATTACCGTGTTC 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 556 ATGTTCCTGGTATAGATTCATGGCCAGGGAAGCAGATTCATAGCCACAATTACCGTGTTC 615
Query 599 CTGATCAATTCAAAGACCAGGTGGTGGTAGTGATAGGAAATTTTGCGAGTGGAGCTGATA 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 616 CTGATCAATTCAAAGACCAGGTGGTGGTAGTGATAGGAAATTTTGCGAGTGGAGCTGATA 675
Query 659 TAAGCAGGGACATAACGGGAGTGGCGAAAGAAGTCCATATTGCGTCTAGATCGAATCCAT 718
| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct 676 TCAGCAGGGACATAACGGGAGTGGCTAAAGAAGTCCATATCGCGTCTAGATCGAATCCAT 735
Query 719 CTAAGACATACTCAAAACTTCCCGGGTCCAGTAATCTATGGCTTCACTCTATGATAGAAA 778
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct 736 CTAAGACATACTCAAAACTTCCCGGGTCAAACAATCTATGGCTTCACTCTATGATAGAAA 795
Query 779 GCGTACACGAAGATGGGTCGATTGTTTTTCAGAACGGTAAGGTTGTACAAGCTGATACCA 838
| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 796 GTGTACACGAAGATGGGACGATTGTTTTTCAGAACGGTAAGGTTGTACAAGCTGATACCA 855
Query 839 TTGTGCATTGCACTGGTTACAAATACCACTTCCCATTTCTCAACACAAATGGTTATATTA 898
||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||
Sbjct 856 TTGTGCATTGCACTGGTTACAAATATCACTTCCCATTTCTCAACACCAATGGCTATATTA 915
Query 899 CTGTCGAGGATAACTGTGTTGGACCGCTTTACAAACACGTGTTTCCGCCTGCGCTTGCTC 958
|||| ||||||||||||||||||||||||||| |||| || |||||||||||||||||||
Sbjct 916 CTGTTGAGGATAACTGTGTTGGACCGCTTTACGAACATGTCTTTCCGCCTGCGCTTGCTC 975
Query 959 CCGGCCTTTCCTTCATCGGTTTACCCTGGATGACACTGCAATTCTTTATGTTTGAGCTCC 1018
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 976 CCGGGCTTTCCTTCATCGGTTTACCCTGGATGACACTGCAATTCTTTATGTTTGAGCTCC 1035
Query 1019 AAAGTAAGTGGGTGGCTGCAGCTTTGTCCGGTCGTGTCACACTTCCTTCAGAAGACAAAA 1078
|||| ||||||||||||||||||||||| || || |||||||||||||||||||| ||||
Sbjct 1036 AAAGCAAGTGGGTGGCTGCAGCTTTGTCTGGCCGGGTCACACTTCCTTCAGAAGAGAAAA 1095
Query 1079 TGATGGAAGACGTTACCGCCTACTATGCAAAGCGTGAGTCCTACGGGCAACCCAAGAGAT 1138
|||||||||||||||||||||||||||||||||||||| | | ||||||||| |||||||
Sbjct 1096 TGATGGAAGACGTTACCGCCTACTATGCAAAGCGTGAGGCTTTCGGGCAACCTAAGAGAT 1155
Query 1139 ACACACATCGACTTGGTGGCGGTCAGGTTGAATACCTCAACTGGATAGCCGAGCAAATTG 1198
||||||||||||||||||| ||||||||||| ||||| || |||||||| ||||||||||
Sbjct 1156 ACACACATCGACTTGGTGGAGGTCAGGTTGATTACCTTAATTGGATAGCAGAGCAAATTG 1215
Query 1199 GCGCACCGCCCGGTGAACAATGGAGGTATCAGGAAATAGATGGCGGATACTACAGACTTG 1258
| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct 1216 GTGCACCGCCCGGTGAACAATGGAGATATCAGGAAATAAATGGCGGATACTACAGACTTG 1275
Query 1259 CTACACAATCAGACACTTTCCGTGATAAATGGGACGATGATCATCTCATAGTTGAGGCTT 1318
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1276 CTACACAATCAGACACTTTCCGTGATAAGTGGGACGATGATCATCTCATAGTTGAGGCTT 1335
Query 1319 ATGAGGATTTCTTGAGGCAGAAGCTGATTAGTAGTCTTCCTTCTCAGTTATTGGAATCCT 1378
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1336 ATGAGGATTTCTTGAGACAGAAGCTGATTAGTAGTCTTCCTTCTCAGTTATTGGAATCTT 1395
Query 1379 GA 1380
||
Sbjct 1396 GA 1397
> AT1G62620.1 | Symbols: | Flavin-binding monooxygenase family
protein | chr1:23182644-23184991 FORWARD LENGTH=1514
Length=1514
Score = 209 bits (113), Expect = 5e-53
Identities = 453/612 (74%), Gaps = 44/612 (7%)
Strand=Plus/Plus
Query 478 GATGAGATCTT-TGATGCTGTTGTTGTTTGTAATGGACATTATACAGAACCTAGAGTTGC 536
|||||||| || ||||||||||||||||||||||||||||||| |||||| | | ||
Sbjct 521 GATGAGAT-TTATGATGCTGTTGTTGTTTGTAATGGACATTATGTTGAACCTCGTCTCGC 579
Query 537 TCATGTTCCTGGTATA-GATTCATGGCCAGGGAA-GCAGATTCATAGCCACAATTACCGT 594
||| ||||||||||| | ||| ||||||||||| | | || |||||||| |||||||||
Sbjct 580 TCAAATTCCTGGTATAAG-TTCTTGGCCAGGGAAAGAA-ATGCATAGCCATAATTACCGT 637
Query 595 GTTCCTGATCAATTCAAAGACCAGGTGGTGGTAG-TGATAGGAAATT-TTGCGAGTG--G 650
|||| || | ||||| ||| |||| || || | | || || || | || | |||| |
Sbjct 638 ATTCCCGAACCATTCAGAGATAAGGTTGTTGT-GCTTATTGGGAACTCTT-CAAGTGCTG 695
Query 651 AGCTGATATAAGCAGGGACATAACGGGAGTGGCGAAAGAAGTCCATATTGCGTCTAGATC 710
|| |||||||| |||||||| | |||| || ||||| || ||| | || | ||| ||
Sbjct 696 AG--GATATAAGTAGGGACATTGCTAGAGTTGCAAAAGAGGTTCATGTGGCTTGTAGGTC 753
Query 711 GAATCCATCTAAGACAT--ACTCAAAACTTCCCGGGTCCAGTAATCTATGG-CTTCACTC 767
|||||| || | || | | ||||| | |||| | | |||||||||| | || ||
Sbjct 754 AAATCCAGCTGATACGTTTA-TCAAA-CAAACCGGTTATAATAATCTATGGACG-CATTC 810
Query 768 TATGATAGAAAGCGTACACGAAGATGGGTC-GATTGTTTTTCAGAACGGTAAG--G-TTG 823
||||| || || || || || ||||| || | |||||| ||||||||| ||| | ||
Sbjct 811 AATGATTGAGAGTGTTCATGAGGATGGCTCTG-TTGTTTATCAGAACGGGAAGACGATT- 868
Query 824 TACAAGCTGATACCATTGTGCATTGCACTGGTTACAAATACCACTTCCCATTTCTCAACA 883
| | | ||||| ||| ||||||||||||| || || || || || || ||||| | |
Sbjct 869 T-CG-GTTGATATTATTATGCATTGCACTGGGTATAAGTATCATTTTCCGTTTCTTGATA 926
Query 884 CAAATGGTTATAT-T-ACTGTCGAGGATAACTGTGTTGGACCGCTT-TACAAACACGTGT 940
| ||||| || | | ||||| || |||||| ||||||| || || |||||| |||| |
Sbjct 927 CCAATGGA-AT-TGTCACTGTAGATGATAACCGTGTTGGGCCA-TTGTACAAAGACGTCT 983
Query 941 TTCCGCCTGCGCTTGCTCCC-GGCCTTTCCTTCATCGGTTTACCCTGG-A--TGACACTG 996
| || || || |||| || ||| |||||||||||||| |||| ||| | || || |
Sbjct 984 TCCCTCCAGCATTTGCACCTTGGC-TTTCCTTCATCGGTATACCATGGCAGGTGTTACCG 1042
Query 997 CAATTCTTTATGTTTGAGCTCCAAAGTAAGTGGGTGGCTGCAGCTTTGTCCGGTCGTG-T 1055
||| |||||||||||| ||||| |||||| | || | | ||| || ||||| | |
Sbjct 1043 ---TTCCCTATGTTTGAGCTGCAAAGCAAGTGGATCGCGGGTGTTTTATCGGGTCG-GAT 1098
Query 1056 CACACTTCCTTC 1067
| | ||||||||
Sbjct 1099 CCCGCTTCCTTC 1110
> AT1G63370.1 | Symbols: | Flavin-binding monooxygenase family
protein | chr1:23503205-23505358 REVERSE LENGTH=1353
Length=1353
Score = 204 bits (110), Expect = 2e-51
Identities = 453/613 (74%), Gaps = 46/613 (8%)
Strand=Plus/Plus
Query 478 GATGAGATCTT-TGATGCTGTTGTTGTTTGTAATGGACATTATACAGAACCTAGAGTTGC 536
|||||||| || ||||||||||||||||||||||||||||||| |||||| | | ||
Sbjct 487 GATGAGAT-TTATGATGCTGTTGTTGTTTGTAATGGACATTATGTTGAACCTCGTCTCGC 545
Query 537 TCATGTTCCTGGTATA-GATTCATGGCCAGGGAA-GCAGATTCATAGCCACAATTACCGT 594
||| ||||||||||| | ||| ||||||||||| | | || |||||||| |||||||||
Sbjct 546 TCAAATTCCTGGTATAAG-TTCTTGGCCAGGGAAAGAA-ATGCATAGCCATAATTACCGT 603
Query 595 GTTCCTGATCAATTCAAAGACCAGGTGG-TGGTAG-TGATAGGAAATT-TTGCGAGTG-- 649
|||| || | ||||| ||| |||| | || | | | || || || | || | ||||
Sbjct 604 ATTCCCGAACCATTCAGAGATAAGGTTGCTG-T-GCTTATTGGGAACTCTT-CAAGTGCT 660
Query 650 GAGCTGATATAAGCAGGGACATAACGGGAGTGGCGAAAGAAGTCCATATTGCGTCTAGAT 709
||| |||||||| |||||||| | |||| || ||||| || ||| | || | ||| |
Sbjct 661 GAG--GATATAAGTAGGGACATTGCTAGAGTTGCAAAAGAGGTTCATGTGGCTTGTAGGT 718
Query 710 CGAATCCATCTAAGACAT--ACTCAAAACTTCCCGGGTCCAGTAATCTATGG-CTTCACT 766
| |||||| || | || | | ||||| | |||| | | |||||||||| | || |
Sbjct 719 CAAATCCAGCTGATACGTTTA-TCAAA-CAAACCGGTTATAATAATCTATGGACG-CATT 775
Query 767 CTATGATAGAAAGCGTACACGAAGATGGGTC-GATTGTTTTTCAGAACGGTAAG--G-TT 822
| ||||| || || || || || ||||| || | |||||| ||||||||| ||| | ||
Sbjct 776 CAATGATTGAGAGTGTTCATGAGGATGGCTCTG-TTGTTTATCAGAACGGGAAGACGATT 834
Query 823 GTACAAGCTGATACCATTGTGCATTGCACTGGTTACAAATACCACTTCCCATTTCTCAAC 882
| | | ||||| ||| ||||||||||||| || || || || || || ||||| |
Sbjct 835 -T-CG-GTTGATATTATTATGCATTGCACTGGGTATAAGTATCATTTTCCGTTTCTTGAT 891
Query 883 ACAAATGGTTATAT-T-ACTGTCGAGGATAACTGTGTTGGACCGCTT-TACAAACACGTG 939
|| ||||| || | | ||||| || |||||| ||||||| || || |||||| ||||
Sbjct 892 ACCAATGGA-AT-TGTCACTGTAGATGATAACCGTGTTGGGCCA-TTGTACAAAGACGTC 948
Query 940 TTTCCGCCTGCGCTTGCTCCC-GGCCTTTCCTTCATCGGTTTACCCTGG-A--TGACACT 995
|| || || || |||| || ||| |||||||||||||| |||| ||| | || ||
Sbjct 949 TTCCCTCCAGCATTTGCACCTTGGC-TTTCCTTCATCGGTATACCATGGCAGGTGTTACC 1007
Query 996 GCAATTCTTTATGTTTGAGCTCCAAAGTAAGTGGGTGGCTGCAGCTTTGTCCGGTCGTG- 1054
| ||| |||||||||||| ||||| |||||| | || | | ||| || ||||| |
Sbjct 1008 G---TTCCCTATGTTTGAGCTGCAAAGCAAGTGGATCGCGGGTGTTTTATCGGGTCG-GA 1063
Query 1055 TCACACTTCCTTC 1067
|| | ||||||||
Sbjct 1064 TCCCGCTTCCTTC 1076
> AT1G62600.1 | Symbols: | Flavin-binding monooxygenase family
protein | chr1:23179477-23181519 FORWARD LENGTH=1532
Length=1532
Score = 171 bits (92), Expect = 2e-41
Identities = 430/591 (73%), Gaps = 32/591 (5%)
Strand=Plus/Plus
Query 478 GATGAGATCTT-TGATGCTGTTGTTGTTTGTAATGGACATTATACAGAACCTAGAGTTGC 536
|||||||| || |||||||||||||||||||||||||||||| | |||||| | ||
Sbjct 558 GATGAGAT-TTATGATGCTGTTGTTGTTTGTAATGGACATTACATTGAACCTCGTCACGC 616
Query 537 TCATGTTCCTGGTATA-GATTCATGGCCAGGGAAGCAGATTCATAGCCACAATTACCGTG 595
| | ||||||||||| | ||| |||||||||||| |||| ||||| || ||||| |||
Sbjct 617 TGAAATTCCTGGTATAAG-TTCTTGGCCAGGGAAGGAGATGCATAGTCATAATTATCGTA 675
Query 596 TTCCTGATCAATTCAAAGACCAGGTGGTGGTAG-TGATAGGAAATTTTGCGAGTGGAGCT 654
| ||||| | || | ||| ||||| || || | | ||||| || | ||| |||| | |
Sbjct 676 TACCTGAACCGTTTAGAGATCAGGTTGTTGT-GCTTATAGGGAACTCTGCAAGTGCTGAT 734
Query 655 GATATAAGCAGGGACATAACGGGAGTGGCGAAAGAAGTCCATATTGCGTCTAGATCGAAT 714
|||||||| ||||| || | |||| || ||||| || ||| | || | ||| || |||
Sbjct 735 GATATAAGTAGGGATATTGCTAGAGTTGCCAAAGAGGTTCATGTGGCTTGTAGGTCCAAT 794
Query 715 CCAT-CTAAGAC--ATACTCAAAACTTCCCGGGTCCAGTAATCTATGGCTTCACTCTATG 771
| | || | || ||| | | | || || | ||||||||||||| | || || |||
Sbjct 795 GC-TGCTGATACGTATATTGAG--CGGCCTGGTTACAGTAATCTATGGATGCATTCGATG 851
Query 772 ATAGAAAGCGTACACGAAGATGGGTC-GATTGTTTTTCAGAACGGTAAG--G-TTGTACA 827
|| || || || || || ||||| || | | ||||||||||| || || | || | |
Sbjct 852 ATTGAGAGTGTCCATGAGGATGGTTCTG-TAGTTTTTCAGAATGGGAAAACGATT-T-CG 908
Query 828 AGCTGATACCATTGTGCATTGCACTGGTTACAAATACCACTTCCCATTTCTC-AACACAA 886
| |||| ||| ||||||||||||| || || || |||||||| ||||| || || |
Sbjct 909 -GTTGATGTTATTATGCATTGCACTGGGTATAAGTATCACTTCCCGTTTCTTGAA-ACCA 966
Query 887 ATGGTTATATTACTGTCGAGGATAACTGTGTTGGACCGCTT-TACAAACACGTGTT-TCC 944
|||| || ||||||| || |||||| |||| || || || |||||| |||| || ||
Sbjct 967 ATGGAAATGTTACTGTAGACGATAACCGTGTCGGGCCA-TTGTACAAAGACGTATTCTCT 1025
Query 945 GCCTGCGCTT-GCTCCC-GGCCTTTCCTTCATCGGTTTACCCTGGATGACACTGCAATT- 1001
|| || ||| || || ||| | |||||| | || |||| |||| | | | ||
Sbjct 1026 -CCAGC-CTTTGCGCCGTGGC-TCTCCTTCGTTGGGATACCATGGAAGGTTGTACCTTTT 1082
Query 1002 CTTTATGTTTGAGCTCCAAAGTAAGTGGGTGGCTGCAGCTTTGTCCGGTCG 1052
| | |||||||| || ||||| |||||| | |||| | |||||| |||||
Sbjct 1083 CCT-ATGTTTGAACTGCAAAGCAAGTGGATCGCTGGTGTTTTGTCGGGTCG 1132
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 67971537930
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5