BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg334706
Length=966
Score E
Sequences producing significant alignments: (Bits) Value
AT1G14120.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-depen... 1349 0.0
AT1G14130.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-depen... 749 0.0
> AT1G14120.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein | chr1:4833518-4835089
REVERSE LENGTH=1190
Length=1190
Score = 1349 bits (730), Expect = 0.0
Identities = 867/933 (93%), Gaps = 9/933 (1%)
Strand=Plus/Plus
Query 38 aaaGTGGAGTAATTCCGACAATAGACTTGGAAGAGGTTAATGATCAAATTCTGAATCAAA 97
||| |||||| ||||| ||||||||||||||||||||||||||||| ||||||||| | |
Sbjct 133 AAA-TGGAGTCATTCCAACAATAGACTTGGAAGAGGTTAATGATCAGATTCTGAATGAGA 191
Query 98 AAATTCGCCAAGCAAGTGAAAAATGGGGATGTTTCATGATGATAAACCATGGAGTTTCTT 157
|||| || |||| ||||| | |||||||||||||| | |||||||||||||||||||||
Sbjct 192 AAATCCGTGAAGCGAGTGAGAGATGGGGATGTTTCACGGTGATAAACCATGGAGTTTCTT 251
Query 158 TGTCTTTGATGGCTGAGATGAAGAAGACTGTTAGAGATCTCCATGAACGTCCATATGATA 217
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 252 TGTCTTTGATGGCTGAGATGAAGAAGACTGTTAGAGATCTCCATGAACGTCCATATGAGA 311
Query 218 TGAAAGTGAGAAACACCGATGTGTTACTAGGTAGTGGTTACAAGCCACTAAGTGAGTTGA 277
||||| || |||||||||||||||||||||| | |||||||||||| ||||||||||| |
Sbjct 312 TGAAACTGCGAAACACCGATGTGTTACTAGGGAATGGTTACAAGCCTCTAAGTGAGTTCA 371
Query 278 ATCCTTTTTATGAATCATTTGGTAGTTTTGACATGGCATCTCCTCAAGCTGTCAATAATT 337
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 372 ATCCTTTTTATGAATCATTTGGTCTTTTTGACATGGCATCTCCTCAAGCTGTCAATAGTT 431
Query 338 TCTGTGATCAACTTGACGCCTCCG-CAGATCAAAGGGAGATTATGCTAAAGTATGCGAAA 396
| |||||| |||| ||||||| || ||||||||||||||||| ||||||||||||| |||
Sbjct 432 TTTGTGATAAACTCGACGCCT-CGCCAGATCAAAGGGAGATTTTGCTAAAGTATGCAAAA 490
Query 397 GCTACTGATGATCTTGCAAGGAATCTAGCAAGGAGATTAGCGGAGAGCTATGGAGTGGTG 456
||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||
Sbjct 491 GCTACTGATGATCTTGCGAGGAGTCTAGCAAGGAGATTAGCGGAGAGCTACGGAGTGGTA 550
Query 457 GA-CCAACATTTTCTGAGAGGATGGCCTAGCCATTTTCGGATGAACAAATATCATTTTAA 515
|| || | ||||| ||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 551 GAGCCCA-ATTTTTTGAGAGGATGGCCAAGCCAATTTCGGATGAACAAATATCATTTTAA 609
Query 516 ACCGGAAGCAGTTGGAAAACTCGGTGTGAGATTACACACGGATCCTGGTTTCTTGACAAT 575
|||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 610 ACCGGATTCTGTTGGAAAACTCGGTGTGATATTACACACGGATCCTGGTTTCTTGACAAT 669
Query 576 TCTTCAAGGTGATGAGGATGTTGGTGGACTTGAAGCCATGGACAATTCTTCTGGATCCTT 635
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 670 TCTTCAAGGTGATGAGGATGTTGGTGGACTTGAAGCCATGGACAACTCTTCAGGATCCTT 729
Query 636 TTTCCCCATTA-ACACATTGCCGAACACGCTTCTTGTTAACCTTGGTGACATGGCTACGA 694
|||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 730 TTTCCCCA-TACACACATTGCCGAACACGCTTCTTGTCAACCTTGGTGACATGGCTACGA 788
Query 695 TATGGAGCAATGGAAGGTTATGCAATGTGAAGCATAGAGTGCAATGCATAGAGGCCAAAA 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 789 TATGGAGCAATGGAAGGTTATGCAATGTGAAGCATAGAGTGCAATGCATAGAGGCAAAAA 848
Query 755 TGAGGATTACTACCGCTACCTTCCTGTTAGGACCAGTGGATAGAGATCTTGAAGCTCCAG 814
|||||||||||| ||| | ||||| ||||||||||||||||||||||||||||||||||
Sbjct 849 TGAGGATTACTATTGCTTCGTTCCTATTAGGACCAGTGGATAGAGATCTTGAAGCTCCAG 908
Query 815 ATGAATTTGTGGATGCTGAACATCCGCGACTATACAAGCCTATCAGCGACGGAGGACTTA 874
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct 909 ATGAATTTGTGGATGCTGAACATCCGCGACTATACAAGCCTATCAGTGACGGAGGACTAA 968
Query 875 GAAAGATTAGACTTAGCAAACATCTTCATGCTGGCGAATCTCTCAAATTTATAACCATTA 934
||||||||||||||||||| |||||||||||||||||||||||||| || |||||||| |
Sbjct 969 GAAAGATTAGACTTAGCAAGCATCTTCATGCTGGCGAATCTCTCAAGTTCATAACCAT-A 1027
Query 935 AA-GATTTAAATGACGTCCCAAAGATAAATTAA 966
|| || |||| |||||||||||||||| |||||
Sbjct 1028 AATGAGTTAAGTGACGTCCCAAAGATAGATTAA 1060
> AT1G14130.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein | chr1:4835724-4837616
REVERSE LENGTH=1400
Length=1400
Score = 749 bits (405), Expect = 0.0
Identities = 746/905 (82%), Gaps = 46/905 (5%)
Strand=Plus/Plus
Query 49 ATTCCGACAATAGACTTGGAAGAGGTTAATGATCAA-ATTCTGAATCAAAAAATTCGCCA 107
|||||||| |||||||||||||||||| |||| || ||||||||||| ||||| || |
Sbjct 181 ATTCCGACTATAGACTTGGAAGAGGTTTCTGAT-AAGATTCTGAATCAGAAAATCCGTGA 239
Query 108 AGCAAGTGAAAAATGGGGATGTTTCATGATGATAAACCATGGAGTTTCTTTGTCTTTGAT 167
||| ||||| | |||||||||||||| | ||||||||||||||||||| |||||||||||
Sbjct 240 AGCCAGTGAGAGATGGGGATGTTTCAGGGTGATAAACCATGGAGTTTCATTGTCTTTGAT 299
Query 168 GGCTGAGATGAAGAAGACTGTTAGAGATCTCCATGAACGTCCATATGATATGAAAGTGAG 227
||||||||||||||||||||||| |||||| | |||||||||| || |||||||| |
Sbjct 300 GGCTGAGATGAAGAAGACTGTTATTGATCTCTTTCAACGTCCATACGAGGTGAAAGTGCG 359
Query 228 AAACACCGATGTGTTACTAGGTAGTGGTTACA-AGC-CACTAAGTGAGTTGAATCCTTTT 285
|||||||||||| | ||||| |||||||||| ||| | | || || | |||||||
Sbjct 360 TAACACCGATGTGCTCCTAGGGAGTGGTTACAGAGCTC-CAAAC-GAAATCAATCCTTAC 417
Query 286 TATGAATCATTTGGTAGTTT-TGACATGGCATCTCCTCAAGCTGTCAATAA-TTTCTGTG 343
|||||| |||| ||| | | ||||||||| |||||||| |||||||||| ||| ||||
Sbjct 418 TATGAAGCATTAGGTC-TCTATGACATGGCTTCTCCTCATGCTGTCAATACCTTT-TGTG 475
Query 344 ATCAACTTGACGCCTCCGCAGATCAAAGGGAGATTATGCTAAAGTATGCGAAAGCTACTG 403
| ||||| || || || ||||||||||||||||||||| | ||||||||||| |||| |
Sbjct 476 ACCAACTCGAAGCTTCTGCAGATCAAAGGGAGATTATGGTGAAGTATGCGAAGGCTA-TC 534
Query 404 A-TG-ATCTTGCAA-GGAATCTAGCAAGGAGATTAGCGGAGAGCTATGGAG-TGGT-G-G 457
| || | ||||||| ||| | |||| |||| |||||| ||||| || || | |||| | |
Sbjct 535 AATGGA-CTTGCAACGGATT-TAGCGAGGAAATTAGCAGAGAGTTACGG-GCTGGTTGAG 591
Query 458 ACCAACATTTTCTGAGAGGATGGCCTAGCCATTTTCGGATGAACAAATATCATTTTAAAC 517
||| || ||||| ||| |||||| ||||| |||||||| |||||||||||||||||||
Sbjct 592 ACCGACTTTTTCAAAGA--ATGGCCGAGCCAGTTTCGGATTAACAAATATCATTTTAAAC 649
Query 518 CGGAAGCAGTTGGAAAACTCGGTGTG-AGATTACACACGGATCCTGGTTTCTTGACAATT 576
| ||| |||| || |||||||||||| | | ||||||||||| | || |||||||| |||
Sbjct 650 CCGAAACAGTCGGGAAACTCGGTGTGCA-ACTACACACGGATTCAGGGTTCTTGACGATT 708
Query 577 CTTCAAGGTGATGAGGATGTTGGTGGACTTGAAGCCATGGACAATTCTTCTGGATCCTTT 636
||||||| |||||| ||||||||||||||||||| |||||||||||||| ||| |||||
Sbjct 709 CTTCAAGATGATGAAAATGTTGGTGGACTTGAAGCTATGGACAATTCTTCAGGAACCTTT 768
Query 637 TTCCCCATTA-ACACATTGCCGAACACGCTT-CTTGTTAACCTTGGTGACATGGCTACGA 694
|||||||| | || | ||||| ||||||||| || | ||||| || |||||||||||||
Sbjct 769 TTCCCCAT-AGACCCGTTGCCAAACACGCTTGCTA-TCAACCTCGGGGACATGGCTACGA 826
Query 695 TATGGAGCAATGGAAGGTTATGCAATGTGAAGCATAGAGTGCAATGCATAGAGGCCAA-A 753
|||||||||| ||||| || |||||||||||||||||||||||||||| ||| || || |
Sbjct 827 TATGGAGCAACGGAAGATTGTGCAATGTGAAGCATAGAGTGCAATGCAAAGAAGC-AACA 885
Query 754 ATGAGG-ATTACTACCGC-TACCTTCCTGTTAGGACCAGTGGATAGAGATCTTG-AAGCT 810
|||||| ||| | | ||| | | ||| | ||||||||| |||||| |||| ||| || ||
Sbjct 886 ATGAGGTATTCC-ATCGCCT-CGTTCTTATTAGGACCAATGGATACAGAT-TTGGAACCT 942
Query 811 CCA-GATGAATTTGTGGATGCTGAACATCCGCGACTATACAAGCCTATCAG-CGACGGAG 868
||| | ||| ||||||||||| |||||||||||||||||||||||||| || | ||| ||
Sbjct 943 CCAAG-TGAGTTTGTGGATGCAGAACATCCGCGACTATACAAGCCTATTAGTC-ACGAAG 1000
Query 869 GACTTA-GAAAGATTAGACTTAGC-AAACATCTT-CATGCTGGCGAATCTCTCAAATTTA 925
| | | |||| |||||| | | | ||| | || |||| ||| ||| ||||||| |||
Sbjct 1001 GGGT-ACGAAATATTAGAATGA-CTAAAAAA-TTGCATGATGGAGAAGCTCTCAAGCTTA 1057
Query 926 TAACC 930
|||||
Sbjct 1058 TAACC 1062
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 47270332327
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5