BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg334832
Length=2052
Score E
Sequences producing significant alignments: (Bits) Value
AT1G15460.1 | Symbols: ATBOR4, BOR4 | HCO3- transporter family ... 3308 0.0
AT1G74810.1 | Symbols: BOR5 | HCO3- transporter family | chr1:2... 2322 0.0
AT2G17120.1 | Symbols: LYM2 | lysm domain GPI-anchored protein ... 54.7 4e-06
> AT1G15460.1 | Symbols: ATBOR4, BOR4 | HCO3- transporter family
| chr1:5310001-5314094 REVERSE LENGTH=2352
Length=2352
Score = 3308 bits (1791), Expect = 0.0
Identities = 1966/2053 (96%), Gaps = 2/2053 (0%)
Strand=Plus/Plus
Query 1 ATGGAGGAAGAAAGACTGGATAGCTCGAAGAGGCTATTTAGAGGTATCGTAGCAGATCTT 60
||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 106 ATGGAGGAAGAAAGAGTGGATAGCTCGAAGAGGCTATTCAGAGGTATAGTAGCAGATCTT 165
Query 61 AGAGGAAGAGCCTTGTGTTACAAGGAAGACTGGGTCGCTGGTCTCCGTTCTGGTTTCGGG 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 166 AGAGGAAGAGCCTTGTGTTACAAGGAAGACTGGGTCGCTGGTCTCCGTTCTGGTTTCGGG 225
Query 121 ATTTTAGCTCCCACAACATATAtttttttCGCTTCTGCGCTTCCGGTTATCGCCTTTGGC 180
|||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 226 ATTTTAGCACCCACAACATATATTTTTTTCGCTTCCGCTCTTCCGGTTATCGCCTTTGGG 285
Query 181 GAGCAACTCAGCCGCGACACAGAGGGAGCGTTGAGCACAGTAGAAACGTTAGCATCAACA 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 286 GAGCAACTCAGCCGCGACACAGAGGGAGCGTTGAGCACAGTAGAAACGTTAGCATCAACA 345
Query 241 GCGTTATGTGGAGTGATACACTCAATTTTGGGAGGGCAACCATTGTTGATACTTGGAGTT 300
|||||||||||||| ||||||||||| |||||||| |||||| |||||||||||||||||
Sbjct 346 GCGTTATGTGGAGTAATACACTCAATATTGGGAGGACAACCACTGTTGATACTTGGAGTT 405
Query 301 GCAGAACCAACTGTGTTAATGTACGTTTACTTGTACAACTTCGCTATAGGAAGACCAGAA 360
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 406 GCAGAACCAACTGTCTTAATGTACGTTTACTTGTACAACTTCGCTATAGGAAGACCAGAA 465
Query 361 TTGGGCAAACAACTCTACTTAGCTTGGGCTGCTTGGGTTTGTGTGTGGACGGCTCTGTTA 420
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 466 TTAGGCAAACAACTCTACTTAGCTTGGGCTGCTTGGGTTTGTGTGTGGACGGCTCTGTTA 525
Query 421 CTGTTCCTTATGGCGATCCTTAATGCGGCTGATATCATTAACCGGTTTACGAGGGTTGCT 480
|||||| | ||||| ||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct 526 CTGTTCGTAATGGCAATCCTCAATACGGCTGATATCATTAACCGGTTTACGAGGGTTGCT 585
Query 481 GGTGAGCTGTTCGGTATGTTGATATCCGTTCTGTTCATCCAACAAGCCATTAAGGGTATG 540
||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 586 GGTGAGCTGTTTGGTATGTTGATCTCCGTTCTGTTCATTCAACAAGCCATTAAGGGTATG 645
Query 541 GTGAGTGAATTTGGGATGCCAAAAGATGAGGACTCAAAACTAGAAAAGTATAGGTTTGAG 600
|||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 646 GTGAGTGAGTTTGGGATGCCAAAAGATGAGGACTCAAAACTAGAAAAGTATAAGTTTGAG 705
Query 601 TGGCTCTATACAAACGGACTTCTCGGCCTCATTTTCACCTTTGGCCTTCTCTACACCGCT 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 706 TGGCTCTATACAAACGGACTTCTCGGCCTCATTTTCACCTTTGGCCTTCTCTACACCGCT 765
Query 661 TTGAAGAGTCGAAAAGCAAGGTCTTGGCGATACGGAACAGGATGGTACAGAAGCTTCATT 720
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 766 TTGAAGAGTCGAAAAGCAAGGTCTTGGCGATACGGAACAGGATGGTACAGAAGCTTCATC 825
Query 721 GCAGACTATGGAGTTCCTTTGATGGTTGTGGTTTGGACAGCATTGTCTTTTAGTACGCCA 780
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 826 GCAGACTATGGAGTTCCTTTGATGGTTGTGGTTTGGACAGCATTGTCTTTTAGTACACCA 885
Query 781 TCAAAACTCCCCTCTGGTGTCCCAAGAAGACTCTTTAGTCCTCTGCCATGGGACTCTGCT 840
||||||||||||||||||||||| |||||||||||||||||| | |||||||||||| ||
Sbjct 886 TCAAAACTCCCCTCTGGTGTCCCGAGAAGACTCTTTAGTCCTTTACCATGGGACTCTCCT 945
Query 841 TCTTTATCACATTGGACTGTCATCAAGGACATGGGGGAAGTCTCTCCGGGTTACATATTC 900
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 946 TCTTTATCACATTGGACTGTCATCAAGGACATGGGAAAAGTCTCTCCGGGTTACATATTT 1005
Query 901 GCGGCATTTATACCCGCATTGATGATAGCAGGGCTCTACTTCTTTGACCACAGCGTTGCC 960
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 1006 GCGGCATTTATACCCGCATTGATGATCGCAGGGCTTTACTTCTTTGACCACAGCGTTGCC 1065
Query 961 TCGCAGCTCGCTCAACAGAAGGAGTTCAACCTCAAGAAGCCTTCGGCGTATCACTATGAC 1020
|||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1066 TCGCAGCTCGCTCAGCAGAAGGAGTTCAACCTCAAGAAGCCTTCAGCGTATCACTATGAC 1125
Query 1021 ATTCTCCTGTTGGGTTTCATGACGTTGATCTGTGGATTGCTCGGTCTGCCTCCTTCCAAC 1080
|||||| |||||||||||||||||||||| ||||||||||| |||||||||||||| ||
Sbjct 1126 ATTCTCTTGTTGGGTTTCATGACGTTGATATGTGGATTGCTAGGTCTGCCTCCTTCAAAT 1185
Query 1081 GGAGTCCTTCCTCAGTCTCCTATGCATACCAAAAGCCTTGCTGTTCTTAAACGACAGTTG 1140
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1186 GGAGTCCTCCCTCAGTCTCCTATGCATACCAAAAGCCTTGCTGTTCTTAAACGACAGTTG 1245
Query 1141 ATCCGGAGGAAGATGGTAAAGTCGGCCAAAGAAAGCATCAGGAAGAGAGAAACTTCCTCA 1200
||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||
Sbjct 1246 ATCCGGAGGAAGATGGTAAAGACAGCCAAAGAAAGCATCAGGAAGAGAGAAACATCCTCA 1305
Query 1201 CAAGTGTACGAGAATATGCAAGAAGTCTTCATAGAAATGGACAAAAGTC-ATCTTGCTCA 1259
||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||
Sbjct 1306 CAAGTGTACGAGAATATGCAAGAAGTCTTCATAGAAATGGATAAAAGTCCA-CTTGCTCA 1364
Query 1260 GACAGATCTAGCAGTGATAATTGAGCTGCAAGATCTGAAAGAAGCAGTAATGAAGAGCAA 1319
|||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1365 GACAGATCCATCAGTGATAATTGAGCTTCAAGATCTGAAAGAAGCAGTAATGAAGAGCAA 1424
Query 1320 TGAGGAAGAAGGAGAGGGAGACAAGGAGAGTGGTTTTGATCCAGAGAAGCACCTTGACGC 1379
||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1425 TGATGAAGAAAGAGAGGGAGACGAGGAGAGTGGTTTTGATCCAGAGAAGCACCTTGACGC 1484
Query 1380 TTATTTGCCTGTTAGAGTCAACGAGCAGAGAGTGAGCAACTTGTTGCAGTCACTGCTGGT 1439
||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 1485 TTACTTGCCTGTTCGAGTCAACGAGCAGAGAGTTAGCAACTTGTTGCAGTCACTGCTTGT 1544
Query 1440 GGCAGGTGCAGTGTTGGCAATGCCGGCCATTAAGCTCATACCTACTTCCATTCTATGGGG 1499
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 1545 GGCAGGTGCAGTGTTGGCTATGCCGGCCATTAAGCTCATACCGACTTCCATTCTATGGGG 1604
Query 1500 ATACTTCGCTTACATGGCCATCGATAGCCTCCCGGGAAATCAATTCTTCGAACGCACAAT 1559
|||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct 1605 ATACTTTGCTTACATGGCCATCGACAGCCTCCCGGGAAATCAATTCTTCGAACGCTTAAC 1664
Query 1560 GCTTCTCTTCGTTCCAACAAGCCGGAGATTCAAGGTCTTGGAGGGAGCACACGCGTCGTT 1619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1665 GCTTCTCTTCGTTCCAACAAGCCGGAGATTCAAGGTCTTGGAGGGAGCACACGCGTCGTT 1724
Query 1620 CGTGGAGAAAGTTCCGTACAAGTCAATGGCTGCGTTCACACTGTTGCAGATATTCTACTT 1679
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1725 CGTGGAGAAAGTTCCTTACAAGTCAATGGCTGCGTTCACACTGTTGCAGATATTCTACTT 1784
Query 1680 TGGGCTGTGCTATGGAGTGACGTGGATTCCGGTGGCTGGAATCATGTTTCCTGTTCCTTT 1739
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1785 TGGGCTGTGCTATGGGGTGACGTGGATTCCGGTGGCTGGAATCATGTTTCCGGTTCCTTT 1844
Query 1740 CTTCCTCTTAATAGCTATCAGACAGTACATTCTCCCGAAGCTCTTTAACCAGGCCCATCT 1799
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1845 CTTCCTCTTAATAGCTATCAGACAGTACATTCTCCCGAAGCTCTTTAACCCGGCCCATCT 1904
Query 1800 GCGAGAACTTGATGCCGCTGAGTACGAAGAAATCCCCGGCACTCCTAGAAACCCGCTCGA 1859
|||||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||| ||
Sbjct 1905 CCGAGAACTCGATGCCGCTGAGTACGAGGAAATCCCCGGTACTCCGAGAAACCCGCTGGA 1964
Query 1860 ACTGTCTTTCCGGTCGAATGACTCGAAGAGAGGTGTCCAAGAAGGGGATGCTGAGATTTT 1919
||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 1965 ACTGTCTTTCCGGTCGAATGACTCGAAGAGAGGCGTCCAAGAAGGCGATGCTGAGATTTT 2024
Query 1920 AGACGAGTTAACGACAAGCAGAGGCGAGCTTAAAGTCCGCACAGTCAGTCTTAACGAAGA 1979
||||||||||||||||||||||||||||||||||||||| ||| | | ||||||||||||
Sbjct 2025 AGACGAGTTAACGACAAGCAGAGGCGAGCTTAAAGTCCGTACATTGAATCTTAACGAAGA 2084
Query 1980 CAGAGGCAACCAGATTTACCCCAAGAAGACAGTAAATGCAGGAGACGGGGACATGAGCAC 2039
|| ||||||||||||||| |||||| ||| |||||| |||||||||||||||||||||||
Sbjct 2085 CAAAGGCAACCAGATTTATCCCAAGGAGAAAGTAAAAGCAGGAGACGGGGACATGAGCAC 2144
Query 2040 GACAAGAGAGTGA 2052
|||||| ||||||
Sbjct 2145 GACAAGGGAGTGA 2157
> AT1G74810.1 | Symbols: BOR5 | HCO3- transporter family | chr1:28108474-28111534
FORWARD LENGTH=2052
Length=2052
Score = 2322 bits (1257), Expect = 0.0
Identities = 1806/2071 (87%), Gaps = 38/2071 (2%)
Strand=Plus/Plus
Query 1 ATGGAGGAAGAAAGACTGGATA-GCTCGAAGAGGCTATTT-AGAGGTATCGT-AGCAGAT 57
||||||||||||||| |||| | ||||||| |||| |||| | ||||||| | || ||||
Sbjct 1 ATGGAGGAAGAAAGAGTGGA-AGGCTCGAAAAGGCCATTTCA-AGGTATCATAAG-AGAT 57
Query 58 CTTAGAGGAAGAGCCTTGTGTTACAAGGAAGACTGGGTCGCTGGTCTCCGTTCTGGTTTC 117
| | |||||||||||||||||||||| |||||||| |||||||||| ||||||||||||
Sbjct 58 GTCAAAGGAAGAGCCTTGTGTTACAAGCAAGACTGGATCGCTGGTCTACGTTCTGGTTTC 117
Query 118 GGGATTTTAGCTCCCACAACATATAtttttttCGCTTCTGCGCTTCCGGTTATCGCCTTT 177
||||||||||| || ||||||||| |||| ||||| ||||||||||| ||||| ||||||
Sbjct 118 GGGATTTTAGCACCGACAACATATGTTTTCTTCGCCTCTGCGCTTCCTGTTATTGCCTTT 177
Query 178 GGCGAGCAACTCAGCCGCGACACAGAGGGAGCGTTGAGCACAGTAGAAACGTTAGCATCA 237
||||||||||| |||| |||||||||| || ||||||||||||| |||||||||||||||
Sbjct 178 GGCGAGCAACTTAGCCACGACACAGAGAGATCGTTGAGCACAGTGGAAACGTTAGCATCA 237
Query 238 ACAGCGTTATGTGGAGTGATACACTCAATT-TTGGGAGGGCAACCATTGTTGATACTTGG 296
|||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||
Sbjct 238 ACAGCGTTATGTGGAGTGATACACTCG-TTATTGGGAGGACAACCATTGTTGATACTTGG 296
Query 297 AGTTGCAGAACCAACTGTGTTAATGTACGTTTACTTGTACAACTTCGCTATAGGAAGACC 356
|||||||||||||||||| ||||||||| ||||||||| ||||||||| |||||||||
Sbjct 297 AGTTGCAGAACCAACTGTCTTAATGTACAAATACTTGTACGACTTCGCTAAAGGAAGACC 356
Query 357 AGAATTGGGCAAACAACTCTACTTAGCTTGGGCTGCTTGGGTTTGTGTGTGGACGGCTCT 416
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct 357 TGAATTGGGCAAACAACTCTACTTAGCTTGGGTTGCTTGGGTTTGTGTGTGGACGGCTTT 416
Query 417 GTTACTGTTCCTTATGGCGATCCTT-AATGCGGCTGATATCATTAACCGGTTTACGAGGG 475
|||||| ||||| |||||||| || || |||| ||||||| |||||||| ||||||
Sbjct 417 GTTACTATTCCTAATGGCGATA-TTCAACATGGCTTATATCATCAACCGGTTCACGAGGA 475
Query 476 TTGCTGGTGAGCTGTTCGGTATGTTGATATCCGTTCTGTT-CATCCAACAAGCCATTAAG 534
| |||||||||||||| ||||||||||| | ||||| || | |||||||| |||| |||
Sbjct 476 TCGCTGGTGAGCTGTTTGGTATGTTGATCGCTGTTCTATTTC-TCCAACAAACCATAAAG 534
Query 535 GGTATGGTGAGTGAATTTGGGATGCCAAAAGATGAGGACTCAAAACTAGAAAAGTAT-AG 593
|| ||||||||||||||| |||| ||||||| ||| ||||||||||| ||||||||| ||
Sbjct 535 GGAATGGTGAGTGAATTTAGGATTCCAAAAGGTGAAGACTCAAAACTTGAAAAGTATCAG 594
Query 594 GTTTGAGTGGCTCTATACAAACGGACTTCTCGGCCTCATTTTCACCTTTGGCCTTCTCTA 653
|||||||||||||| |||||||||||||| ||||| |||||||| | || ||| ||||
Sbjct 595 -TTTGAGTGGCTCTACACAAACGGACTTCTTGGCCTTATTTTCACAGTCGGTCTTGTCTA 653
Query 654 CACCGCTTTGAAGAGTC-GAAAAGCAAGGTCTTGGCGATACGGAACAGGATGGTACAGAA 712
||||||||||||||| | |||||||||||||||||| ||||||||||||||| | | |||
Sbjct 654 CACCGCTTTGAAGAG-CAGAAAAGCAAGGTCTTGGCCATACGGAACAGGATGTTGCCGAA 712
Query 713 GCTTCATTGCAGACTATGGAGTTCCTTTGATGGTTGTGGTTTGGACAGCATTGTCTTTTA 772
||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||| |
Sbjct 713 GCTTCGTTGCAGACTACGGAGTTCCGTTGATGGTTGTGGTTTGGACAGCATTGTCTTTCA 772
Query 773 GTACGCCATCAAAACTCCCCTCTGGTGTCCCAAGAAGACTCTTTAGTCCTCTGCCATGGG 832
|||||||||||||||| |||||||||||||| ||||||||| |||||||||| |||||||
Sbjct 773 GTACGCCATCAAAACTACCCTCTGGTGTCCCGAGAAGACTCGTTAGTCCTCTTCCATGGG 832
Query 833 ACTCTGCTTCTTTATCACATTGGACTGTCATCAAGGACATGGGGGAAGTCTCTCCGGGTT 892
|||||| ||||||| |||||||||||||||||||||||||||| |||||||||| ||||
Sbjct 833 ACTCTGTTTCTTTAACACATTGGACTGTCATCAAGGACATGGGTAAAGTCTCTCCCGGTT 892
Query 893 ACATATTCGCGGCATTTATACCCGCATTGATGATAGCAGGGCTCTACTTCTTTGACCACA 952
||||||| || || |||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 893 ACATATTTGCAGCGTTTATACCCGCATTGATGATCGCAGGCCTCTACTTCTTTGACCACA 952
Query 953 GCGTTGCCTCGCAGCTCGCTCAACAGAAGGAGTTCAACCTCAAGAAGCCTTCGGCGTATC 1012
|||||| |||||||||||| || ||||||||||| ||||||||||| ||||| || ||||
Sbjct 953 GCGTTGTCTCGCAGCTCGCGCAGCAGAAGGAGTTTAACCTCAAGAACCCTTCTGCATATC 1012
Query 1013 ACTATGACATTCTCCTGTTGGGTTTCATGACGTTGATCTGTGGATTGCTCGGTCTGCCTC 1072
|||| ||||||||| |||| ||||||||| |||||||||||| |||||||||| || |
Sbjct 1013 ACTACGACATTCTCTTGTTAGGTTTCATGGTATTGATCTGTGGAATGCTCGGTCTACCGC 1072
Query 1073 CTTCCAACGGAGTCCTTCCTCAGTCTCCTATGCATACCAAAAGCCTTGCTGTTCTT-AAA 1131
|||||||||||||||| || |||||||||||||||||||||||||| |||||| || |||
Sbjct 1073 CTTCCAACGGAGTCCTCCCGCAGTCTCCTATGCATACCAAAAGCCTAGCTGTT-TTCAAA 1131
Query 1132 CGACAGTTGATCCGGAGGAAGATGGTAAAGTCGGCCAAAGAAAGCATCAGGA-AGAGAGA 1190
|||||||| || |||||||||||||| | | | ||||||||||||||||| | ||| ||
Sbjct 1132 CGACAGTTAATGCGGAGGAAGATGGTGATGACAGCCAAAGAAAGCATCAG-ACAGAAAGC 1190
Query 1191 AACTTCCTCACAAGTGTACGAGAATATGCAAGAAGTCTTCATAGAAATGGACAAAAGTC- 1249
||| ||||| |||||||||||| ||||| || ||||||||||||||||||||||||| |
Sbjct 1191 AACGTCCTCTCAAGTGTACGAGGATATGGAACAAGTCTTCATAGAAATGGACAAAAGCCC 1250
Query 1250 ATCTTGCTCAGACAGAT-CTAGCAGTGATAATTGAGCTGCAAGATCTGAAAGAAGCAGTA 1308
| |||||| ||||| | | | || |||||| ||||||||||||||||||||| |||||
Sbjct 1251 A-CTTGCTGAGACACACACAA-CACTGATAAATGAGCTGCAAGATCTGAAAGAGGCAGTG 1308
Query 1309 ATGAAGA-GCAATGAGGAAGAAGGAGAGGGAGAC-AAGGAGAGTGGTTTTGATCCAGAGA 1366
||||||| | | ||| || || || || | | ||| |||||||||| ||||||||||
Sbjct 1309 ATGAAGAAG-AGTGACGACGACGGGGATACCGGCGAAG-AGAGTGGTTTCGATCCAGAGA 1366
Query 1367 AGCACCTTGACGCTTATTTGCCTGTTAGAGTCAACGAGCAGAGAGTGAGCAACTTGTTGC 1426
||||| |||||||||| ||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 1367 AGCACGTTGACGCTTACTTGCCTGTTCGAGTCAACGAGCAGAGAGTGAGCAACCTGTTGC 1426
Query 1427 AGTCACTGCTGGTGGCAGGTGCAGTGTTGGCAATGCCGGCCATTAAGCTCATACCTACTT 1486
| ||| |||| ||| |||||||||||| || | |||| ||||||||||||||| ||||
Sbjct 1427 AATCATTGCTAGTGATAGGTGCAGTGTTTGCTCTACCGGTCATTAAGCTCATACCGACTT 1486
Query 1487 C-CATTCTATGGGGATACTTCGCTTACATGGCCATCGATAGCCTCCCGGGA-AATCAATT 1544
| | ||||||||||||| || |||||||||||||| ||||||||||| | | ||||||||
Sbjct 1487 CAC-TTCTATGGGGATATTTTGCTTACATGGCCATTGATAGCCTCCCAG-ACAATCAATT 1544
Query 1545 CTTCGAACGCACAATGCTTCTCTTCGTTCCAACAAGCCGGAGATTCAAGGTCTTGGAGGG 1604
||||||||| ||| | ||||||||||| ||| ||| ||||||||||||||||||||| ||
Sbjct 1545 CTTCGAACGAACAGTACTTCTCTTCGTCCCACCAACCCGGAGATTCAAGGTCTTGGAAGG 1604
Query 1605 AGCACACGCGTCGTTCGTGGAGAAAGTTCCGTACAAGTCAATGGCTGCGTTCACACTGTT 1664
||| || || ||||||||||||||||||||| | |||||||| ||||| ||||| || ||
Sbjct 1605 AGCGCATGCATCGTTCGTGGAGAAAGTTCCGCATAAGTCAATCGCTGCATTCACGCTATT 1664
Query 1665 GCAGATATTCTACTTTGGGCTGTGCTATGGAGTGACGTGGATTCCGGTGGCTGGAATCAT 1724
|||||| ||||||||||||| ||||| ||||||||||||||||| ||||| ||||||||
Sbjct 1665 TCAGATACTCTACTTTGGGCTTTGCTACGGAGTGACGTGGATTCCAGTGGCCGGAATCAT 1724
Query 1725 GTTTCCTGTTCCTTTCTTCCTCTTAATAGCTATCAGACAGTACATTCTCCCGAAGCTCTT 1784
|||||| |||| ||||||||| ||| |||| |||||||||||| ||||||| ||||||||
Sbjct 1725 GTTTCCGGTTCTTTTCTTCCTTTTAGTAGCCATCAGACAGTACCTTCTCCCTAAGCTCTT 1784
Query 1785 TAA-CCAGGCCCATCTGCGAGAACTTGATGCCGCTGAGTACGAAGAAATCCCCGGCACTC 1843
||| |||| || |||| || ||||| ||||| || ||||| || || ||||| || ||||
Sbjct 1785 TAAACCAG-CCTATCTCCGGGAACTCGATGCGGCGGAGTATGAGGAGATCCCTGGAACTC 1843
Query 1844 CTAGAAACCCGCTCGAACTGTCTTTCCGGTCGAATGACTCGAAGAGAGGTGTCCAAGAAG 1903
||||||||||||| |||||||||||| |||||||| ||||| |||||| |||||||| |
Sbjct 1844 CTAGAAACCCGCTTGAACTGTCTTTCAGGTCGAATAACTCGGCGAGAGGGGTCCAAGA-G 1902
Query 1904 GG-GATGCTGAGATTTTAGACGAGTTAACGACAAGCAGAGGCGAGCTTAAAGTCCGCACA 1962
| |||||||||||| ||||||||||||| || |||||||||||||| |||||||| |||
Sbjct 1903 TGTGATGCTGAGATTCTAGACGAGTTAACAACGAGCAGAGGCGAGCTCAAAGTCCGTACA 1962
Query 1963 GTCAGTCTTAACGAAGACAGAGGCAACCAGATTTACCCCAAGAAGACAGTA-AATGCAGG 2021
|| ||| ||||||||||| |||| ||||||| || |||||| ||| |||| || | |||
Sbjct 1963 CTCGGTCATAACGAAGACAAAGGCCACCAGATATATCCCAAGGAGATAGTAGAA-GTAGG 2021
Query 2022 AGACGGGGACATGAGCACGACAAGAGAGTGA 2052
|| ||||||||||| | | |||||||||
Sbjct 2022 GGATGGGGACATGAGTTCTTCGAGAGAGTGA 2052
> AT2G17120.1 | Symbols: LYM2 | lysm domain GPI-anchored protein
2 precursor | chr2:7459047-7460819 FORWARD LENGTH=1333
Length=1333
Score = 54.7 bits (29), Expect = 4e-06
Identities = 34/36 (94%), Gaps = 1/36 (3%)
Strand=Plus/Minus
Query 1313 AGAGCAATGAGGAAGAAGGAGAGGGAGACAAGGAGA 1348
|||| | |||||||||||||||||||||||||||||
Sbjct 173 AGAG-AGTGAGGAAGAAGGAGAGGGAGACAAGGAGA 139
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 101706304170
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5