BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg334934 Length=324 Score E Sequences producing significant alignments: (Bits) Value AT1G16600.1 | Symbols: | pseudogene, putative cycloartenol syn... 152 2e-36 > AT1G16600.1 | Symbols: | pseudogene, putative cycloartenol synthase | chr1:5675169-5675433 FORWARD LENGTH=265 Length=265 Score = 152 bits (82), Expect = 2e-36 Identities = 87/89 (98%), Gaps = 1/89 (1%) Strand=Plus/Plus Query 229 CAGGAAATGACAGGAGTGTTCATGAAGAACTGTTTTTCTAAACTACGTTACCTACAGAAA 288 |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct 134 CAGGAAATGACAGGAGTGTTCATGAAGAACTGTTTT-CTAAACTATGTTACCTACAGAAA 192 Query 289 CATCTTCCCCATATGGGCACTTGCAGAGT 317 ||||||||||||||||||||||||||||| Sbjct 193 CATCTTCCCCATATGGGCACTTGCAGAGT 221 Score = 84.2 bits (45), Expect = 7e-16 Identities = 45/45 (100%), Gaps = 0/45 (0%) Strand=Plus/Plus Query 186 ACTAATCATCAATTTACAATTAGAAAACGGAGATTATCCTCAACA 230 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ACTAATCATCAATTTACAATTAGAAAACGGAGATTATCCTCAACA 45 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 15080324700 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5