BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg335100
Length=2988
Score E
Sequences producing significant alignments: (Bits) Value
AT1G18410.1 | Symbols: | P-loop containing nucleoside triphosp... 3009 0.0
AT1G73860.1 | Symbols: | P-loop containing nucleoside triphosp... 702 0.0
> AT1G18410.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:6336528-6342460
REVERSE LENGTH=3423
Length=3423
Score = 3009 bits (1629), Expect = 0.0
Identities = 1915/2051 (93%), Gaps = 27/2051 (1%)
Strand=Plus/Plus
Query 943 GAGCTTCAACAATTCAAAAAAGAGACGCTAACAGTCACTACAAGCCTTGAAGCTAAAAAT 1002
|||||| ||||||| ||| | ||||| | || ||||||||||||||||||||| ||||
Sbjct 1387 GAGCTTGAACAATTTAAACAGGAGACAATGACCGTCACTACAAGCCTTGAAGCTCAAAAC 1446
Query 1003 CGAGAGCTTGAACAATTTA-AAAAGGAGACAATGTCTGTTAATACAAGCCTTGAAGCAAA 1061
||||||||||||||| || |||| ||||||||| |||||||||||||||||||||| ||
Sbjct 1447 CGAGAGCTTGAACAAGCTATAAAA-GAGACAATGACTGTTAATACAAGCCTTGAAGCTAA 1505
Query 1062 AAATCGAGAGCTTGAACAATTTAAAAAGGAGACGGTGACTTTTAATACAAGCCTTGAAGC 1121
||| |||||||||||||||| |||||| ||||| ||||| |||||||||||||| ||||
Sbjct 1506 AAACCGAGAGCTTGAACAATCTAAAAAAGAGACAATGACTGTTAATACAAGCCTTAAAGC 1565
Query 1122 AAAAAATCGAGAGCTTGaaaaaaaTCTGGTCCACTGGAAGAGTAAAGCCAAAGAAATGGA 1181
||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct 1566 GAAAAACCGAGAGCTTGAACAAAATCTCGTCCACTGGAAGAGTAAAGCCAAAGAAATGGA 1625
Query 1182 AGAAAAATCAGAGTTGAAGAATCGGAGTTGGAGTCAGAAAGAACTTTCGTATAGAAGCTT 1241
||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 1626 AGAAAAATCAGAGTTAAAGAATCGAAGTTGGAGTCAGAAAGAACTTTCCTATAGAAGCTT 1685
Query 1242 TATCAGTTTCCAATTCAAGGCGCTACAAGAGTTGAGGTTCTGTTCTAACTCCATCAAACA 1301
|||||||||||| | | |||||||||||||||||||||||| |||||| || ||||||||
Sbjct 1686 TATCAGTTTCCAGTGCCAGGCGCTACAAGAGTTGAGGTTCTATTCTAAGTCTATCAAACA 1745
Query 1302 AGAAATACTAAAAGTTCAAGATAAGTATACAACAGAGTTTAGTCAATTAGGGAGGAAATT 1361
||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||
Sbjct 1746 AGAAATACTAAAAGTTCAAGATAAGTATACAGTAGAGTTTAGTCAATTAGGTAAGAAATT 1805
Query 1362 GCTTGAACTTGGAGATGCTGCTGCAAACTATCACGAAGTCCTAACTGAAAACCAAAAGCT 1421
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1806 GCTTGAACTTGGAGATGCTGCCGCAAACTATCACGAAGTCCTAACTGAAAACCAAAAGCT 1865
Query 1422 CTTCAATGAACTTCAGGAGCTAAAAGGCAACATTAGAGTGTATTGTCGGGTGAGGCCTTT 1481
||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||
Sbjct 1866 CTTCAATGAACTTCAGGAGCTTAAAGGAAACATTAGAGTGTATTGTCGAGTGAGGCCTTT 1925
Query 1482 CTTGCGAGGGCAAGGTGCATCAAAAACTGTGGTAGAACACATTGGTGATCATGGGGAGTT 1541
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1926 CTTGCGTGGGCAAGGTGCATCAAAAACTGTGGTAGAACACATTGGTGATCATGGGGAGTT 1985
Query 1542 GGTAGTTCTCAATCCAACAAAACCTGGGAAAGATGGTCTTCGAAAATTTAAGTTCAATAA 1601
||||||||||||||||||||||||||| || |||| || ||||||||||| |||||||||
Sbjct 1986 GGTAGTTCTCAATCCAACAAAACCTGGCAAGGATGCTCATCGAAAATTTAGGTTCAATAA 2045
Query 1602 GGTCTACAGTCCTGCCTCTACTCAAGCTGAGGTATTTTCAGATATAAAACCTCTTGTTCG 1661
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2046 GGTCTACAGTCCTGCCTCTACTCAAGCTGAGGTATTTTCAGATATAAAACCTCTTATTCG 2105
Query 1662 ATCAGTTCTCGACGGGTACAATGTATGTATCTTTGCATATGGTCAGACAGGATCCGGGAA 1721
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2106 ATCAGTTCTTGACGGGTACAATGTATGTATCTTTGCATATGGTCAGACAGGATCAGGGAA 2165
Query 1722 AACTTACACAATGACTGGTCCAGATGGAGCAAGCGAAGAAGAGTGGGGAGTAAACTATCG 1781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2166 AACTTACACAATGACTGGTCCAGATGGAGCAAGCGAAGAAGAGTGGGGAGTAAACTATCG 2225
Query 1782 TGCTCTCAATGACCTCTTCAAAATCTCTCAAACCCGAAAAAGCAACATAGCGTATGAAGT 1841
|||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||
Sbjct 2226 TGCTCTCAATGACCTCTTCAGAATCTCTCAATCCCGTAAAAGCAACATAGCGTATGAAGT 2285
Query 1842 CGGGGTGCAAATGGTGGAGATATACAATGAACAAGTGCGCGATTTACTCTCTGGGATTCT 1901
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2286 TGGGGTGCAGATGGTGGAGATATACAATGAACAAGTGCGCGATTTACTCTCTGGGATTCT 2345
Query 1902 TTCTACAACTCAACAAAACGGTCTTGCTGTACCTGATGCAAGCATGTATCCTGTGACATC 1961
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2346 CTCTACAACTCAACAGAACGGTCTTGCTGTACCTGATGCAAGCATGTATCCTGTGACATC 2405
Query 1962 CACCTCGGATGTTCTTGAATTAATGAGCATTGGGCTACAAAACCGAGCCGTTAGCTACAC 2021
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct 2406 CACCTCGGATGTTCTTGAATTAATGAGCATTGGGCTACAAAACCGAGTTGTTAGCTCCAC 2465
Query 2022 TGCCTTGAACGAAAGAAGTAGCCGCTCTCACAGCATTGTGACTGTTCATGTTCGTGGCAA 2081
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2466 TGCCTTGAACGAAAGAAGTAGCCGCTCTCACAGCATTGTCACTGTTCATGTTCGTGGCAA 2525
Query 2082 GGACTTGAAGACCGGTTCTGTGCTGTATGGAAATCTACATTTGGTAGATCTGGCAGGTAG 2141
|||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct 2526 GGACTTGAAGACTGGTTCTGCGCTGTATGGAAATCTACATTTGGTAGATCTAGCAGGTAG 2585
Query 2142 TGAGAGAGTTGACCGCTCTGAAGTTACAGGAGACAGACTTAAAGAAGCACAACATATAAA 2201
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2586 TGAGAGAGTTGATCGCTCGGAAGTTACAGGAGACAGACTTAAAGAAGCACAACATATAAA 2645
Query 2202 CAAGTCACTCTCATCTCTAGGAGATGTGATATTCTCTCTTGCTTCAAAGAGTTCTCATGT 2261
||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2646 CAAGTCACTCTCAGCTCTAGGAGATGTGATATTCTCTCTTGCTTCAAAAAGTTCTCATGT 2705
Query 2262 ACCATACAGGAACAGCAAACTAACTCAGCTTCTCCAAAGCTCTCTAGGTGGTCGAGCAAA 2321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2706 ACCATACAGGAACAGCAAACTAACTCAGCTTCTCCAAAGCTCTCTAGGTGGTCGAGCAAA 2765
Query 2322 GACATTGATGTTTGTTCAACTCAATCCTGATATTACTTCATATTCAGAGTCAATGAGTAC 2381
|||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2766 GACACTAATGTTTGTTCAACTGAATCCTGATATTACTTCATATTCAGAGTCAATGAGTAC 2825
Query 2382 TTTGAAATTCGCAGAGCGTGTCTCTGGAGTTGAGTTAGGTGCTGCAAAAAGCAGCAAAGA 2441
||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||
Sbjct 2826 TTTGAAATTCGCAGAGCGTGTCTCTGGAGTTGAGTTAGGAGCTGCTAAGAGCAGCAAAGA 2885
Query 2442 TGGTAGAGACGTTAGAGACTTAATGGAGCAGTTAGGGTCCCTTAAGGACACAATAGCGAG 2501
|||||||||||||||||| |||||||||||| | | ||||||||||||
Sbjct 2886 TGGTAGAGACGTTAGAGAATTAATGGAGCAG---G--------A----CACAATAGCGAG 2930
Query 2502 AAAAGACGATGAGATAGAGCGGCTTCATTTGCTTAAGGACATTAATTATCCACAGAGACT 2561
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 2931 AAAAGACGATGAGATAGAGCGGCTTCATTTGCTTAAGGACATAAATTACCCACAGAGACT 2990
Query 2562 GCAGAGAAAA-AGCTTAGGACAATCCGATGACTTCAACTCAGAAGCTGGAGATTCACAGT 2620
||||| |||| ||||||||||||||||||||||| ||||||||||| |||||||| ||||
Sbjct 2991 GCAGA-AAAAGAGCTTAGGACAATCCGATGACTTTAACTCAGAAGCGGGAGATTCGCAGT 3049
Query 2621 TGTCTATAGAAGACGACTCAAGAATCCAACAAGATTATACCAGACAGTCACGACACTCTG 2680
||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct 3050 TGTCTATAGAAGATGACTCAAGATTCCAACACGATTATACCAGACAGTCACGACACTCTG 3109
Query 2681 TCACGGATGGTGAGACCTTAGCTTCCTCCATTGATGCAGAGTACGATGATGAAACAGAA- 2739
||||||| || ||| |||||||||| |||| |||||| ||||| |||||||||||||||
Sbjct 3110 TCACGGACGGGGAGGCCTTAGCTTCTTCCACTGATGCGGAGTATGATGATGAAACAGAAG 3169
Query 2740 --TCCATTGATGCTCCTT---CAGCAGAAGGAAGAAAACCTTTAAAGTATT-CAGACAAA 2793
|||| ||||||||||| |||||||||| ||||||||||||||| ||| ||||||||
Sbjct 3170 GATCCACTGATGCTCCTTGTGCAGCAGAAGGGAGAAAACCTTTAAAG-ATTTCAGACAAA 3228
Query 2794 CCTAAACCGGTGACTCCAGGGAGTAGTACGACAACATCACGACCACTTGATAAACTCAAG 2853
|||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct 3229 CCTAAACCGGTGACTCCAAGGAGTAATACGACAACATCACGACCACTTGATAAACTCAAG 3288
Query 2854 CAAGTCGCTACGAGGACGTCGAACATAGCAAAGGCCACGTCAGGCTTGTCGTCACCAAGT 2913
|||||| ||| ||||||| | ||||| |||||||| ||||||| ||||| |||||| |||
Sbjct 3289 CAAGTCACTATGAGGACGACAAACATTGCAAAGGCTACGTCAGCCTTGTTGTCACCGAGT 3348
Query 2914 TCTCAAGGCATGAAGAAGACGGGAAGTGCTTCTAATTTGCTCAAGTCATCGAAAGATTCC 2973
|||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||
Sbjct 3349 TCTCAAGGCATGAAGAAGACGGGAAGTGCTTCTAATTTTCTAAAGTCACCGAAAGATTCG 3408
Query 2974 AAACGGTGGTC 2984
||||| |||||
Sbjct 3409 AAACGTTGGTC 3419
Score = 710 bits (384), Expect = 0.0
Identities = 484/532 (91%), Gaps = 8/532 (2%)
Strand=Plus/Plus
Query 613 ACAGAAAAGTCTAAGCTGGAAGAGAAGAAGAAAGACAAAGAGGAGGATATGGTTAGGCTA 672
||||||||||| ||||||||||| |||||||||||||||||||||||||||||| || ||
Sbjct 994 ACAGAAAAGTCCAAGCTGGAAGAAAAGAAGAAAGACAAAGAGGAGGATATGGTTGGGATA 1053
Query 673 GAGAAAGAAAATGGTCATTATAATCTTGAAATTTCTACTTTAAGGCGAGAACTAGAGACA 732
||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct 1054 GAGAAAGAAAATGGTCATTATAATCTTGAAATTTCTACTCTAAGGCGAGAACTGGAGACA 1113
Query 733 ACCAAGAAAGCATATGAACAACAATGCTTGCAAATGGAAAGCCAGACAAA-GGTCGCTAC 791
||||||||||||||||||||||||||||| |||||||||||| | ||||| || ||||||
Sbjct 1114 ACCAAGAAAGCATATGAACAACAATGCTTACAAATGGAAAGCAAAACAAAAGG-CGCTAC 1172
Query 792 AGCAGGTATCGAGGACAGGGTTAAGGAGCTTGAACAAATGAGAGAGGATGCAAGCACTGC 851
||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 1173 AGCTGGTATCGAGGACAGGGTTAAGGAGCTTGAACAAATGAGAAAGGATGCAAGCGTTGC 1232
Query 852 AA-AAATTGCCCTTGAAGAAAGGGTTAGGGAGCTTGAAGAGATGGGAAAAGAAGCAAATG 910
|| ||| |||||||| ||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 1233 AAGAAAA-GCCCTTGAGGAAAGGGTTAGGGAGCTTGAAAAGATGGGAAAAGAAGCAGATG 1291
Query 911 CTGTTAAAATGACTCTTGAGGAAAAGGTGAAGGAGCTTCAACAAT-TCAAAAAAGAGACG 969
|||||||||||| |||||||||||||||||||||||||||| ||| | ||| | ||||||
Sbjct 1292 CTGTTAAAATGAATCTTGAGGAAAAGGTGAAGGAGCTTCAAAAATAT-AAAGATGAGACG 1350
Query 970 CTAACAGTCACTACAAGCCTTGAAGCTAAAAATCGAGAGCTTGAACAATTTAAAAAGGAG 1029
|||| |||||||||||| |||||| |||||||||||||||||||||||||||| |||||
Sbjct 1351 ATAACTGTCACTACAAGCATTGAAGGTAAAAATCGAGAGCTTGAACAATTTAAACAGGAG 1410
Query 1030 ACAATGTCTGTTAATACAAGCCTTGAAGCAAAAAATCGAGAGCTTGAACAATTTA-AAAA 1088
|||||| | || | ||||||||||||||| |||| ||||||||||||||| || ||||
Sbjct 1411 ACAATGACCGTCACTACAAGCCTTGAAGCTCAAAACCGAGAGCTTGAACAAGCTATAAAA 1470
Query 1089 GGAGACGGTGACTTTTAATACAAGCCTTGAAGCAAAAAATCGAGAGCTTGaa 1140
| |||| ||||| ||||||||||||||||||| ||||| ||||||||||||
Sbjct 1471 G-AGACAATGACTGTTAATACAAGCCTTGAAGCTAAAAACCGAGAGCTTGAA 1521
Score = 664 bits (359), Expect = 0.0
Identities = 377/386 (98%), Gaps = 0/386 (0%)
Strand=Plus/Plus
Query 120 AGATCCATCATCCCCTGGATCAATGCTCCATGGAGGACACAAGTCCCACGAGGCTTTCCA 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 609 AGATCCATCATCCCCTGGATCAATGCTCCATGGAGGACACAAGTCCCACGAGGCTTTCCA 668
Query 180 AATGAAACAGTGCCGATTTGATCTCCAAGCCGCAAAGATTTCAGAACTGATGAAATCAAA 239
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 669 AATGAAACAGGGGCGATTTGATCTCCAAGCCGCAAAGATTTCAGAACTGATGAAATCAAA 728
Query 240 CAATTTAGATAATGCTCCCACGCAGTCACTTCTAAGTATCGTTAATGGAATTCTTGATGA 299
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 729 CAATTTAGATAATGCTCCCACACAGTCACTTCTAAGTATCGTTAATGGAATTCTTGATGA 788
Query 300 AACTATTGAGAGAAAGAATGGTGAAATCCCTCAGCGTGTAGCATCTCTGCTGAGGAAAGT 359
||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||
Sbjct 789 AACTATTGAGAGAAAGAATGGTGAACTCCCTCAGCGTGTAGCATGTCTGCTGAGAAAAGT 848
Query 360 TGTGCAGGAAATCGAGCGACGTATTTCAACTCAATCTGAGCATCTAAGAACGCAAAACAG 419
|||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 849 CGTGCAGGAAATCGAGCGACGAATTTCAACTCAATCTGAACATCTAAGAACGCAAAACAG 908
Query 420 TGTGTTTAAAGCTCGTGAGGAGAAGTACCAGTCAAGGATCAAAGTTCTTGAAACCTTAGC 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 909 TGTGTTTAAAGCTCGTGAGGAGAAGTACCAGTCAAGGATCAAAGTTCTTGAAACCTTAGC 968
Query 480 TTCAGGAACTAGTGAAGAAAATGAGA 505
||||||||||||||||||||||||||
Sbjct 969 TTCAGGAACTAGTGAAGAAAATGAGA 994
Score = 204 bits (110), Expect = 5e-51
Identities = 116/119 (97%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 1 ATGCCGTTCTTCTCTTGTTGCACCAAAAGAGCAATCTTCTGTTCCTCTCCAGGCAGCTCT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 436 ATGCCGTTCTTCTCTTGTTGCACCAAAAGAGCAATCTTCTGTTCCTCTCCAGGCAGCTCT 495
Query 61 CATGGAGGTTCAACTCCCCGTAGTCCCTTCTCTCCATCTTCTGCACATGAAAGGCATAA 119
|||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||
Sbjct 496 CATGGAGGTTCAACTCCCCGTAGTCCCTTCTCTCCATCATCTCCACGTGAAAGGCATAA 554
> AT1G73860.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:27770986-27776857
REVERSE LENGTH=3460
Length=3460
Score = 702 bits (380), Expect = 0.0
Identities = 556/641 (87%), Gaps = 12/641 (2%)
Strand=Plus/Plus
Query 1894 GGGATTCTTTCTACAACTCAACAAAACGGTCTTGCTGTACCTGATGCAAGCATGTATCCT 1953
||||| |||||||||||||||||||| || || ||||| ||||| |||||||||||||||
Sbjct 2176 GGGATCCTTTCTACAACTCAACAAAATGGCCTGGCTGTGCCTGACGCAAGCATGTATCCT 2235
Query 1954 GTGACATCCACCTCGGATGTTCTTGA-ATTAAT-GAGCATTGGGCTACAAAACCGAGCCG 2011
|||||||| || || ||||| || | ||| || || |||||| ||||| || |||||||
Sbjct 2236 GTGACATCAACTTCAGATGTGATT-ACATTGATGGA-CATTGGACTACAGAATCGAGCCG 2293
Query 2012 TTAGCTAC-ACTGCCTTGAACGAAAGAAGTAGCCGCTCTCACAGCATTGTGACTGTTCAT 2070
|| | | | ||||||||||| ||||||||||| || || || |||||||| ||||||||
Sbjct 2294 TT-GGTTCTACTGCCTTGAATGAAAGAAGTAGTCGTTCACATAGCATTGTCACTGTTCAC 2352
Query 2071 GTTCGTGGCAAGGACTTGAAGACCGGTTCTGTGCTGTATGGAAATCTACATTTGGTAGAT 2130
||||| || || || || ||||||||||| ||||| || || ||||| |||||||| |||
Sbjct 2353 GTTCGCGGTAAAGATTTAAAGACCGGTTCCGTGCTATACGGTAATCTTCATTTGGTGGAT 2412
Query 2131 CTGGCAGGTAGTGAGAGAGTTGACCGCTCTGAAGTTACAGGAGACAGACTTAA-AGAAGC 2189
|||||||| ||||||||||| || ||||||||||||||||||||||||| ||| ||||||
Sbjct 2413 CTGGCAGGAAGTGAGAGAGTAGATCGCTCTGAAGTTACAGGAGACAGAC-TAAGAGAAGC 2471
Query 2190 ACAACATATAAACAAGTCACTCTCATCTCTAGGAGATGTGATATTCTCTCTTGCTTCAAA 2249
|||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||
Sbjct 2472 ACAACATATAAACAAGTCGCTCTCATCTCTTGGAGATGTGATATTCTCTCTCGCTTCAAA 2531
Query 2250 GAGTTCTCATGTACCATACAGGAACAGCAAACTAACTCAGCTTCTCCAAAGCTCTCTAGG 2309
||||||||||||||||||||| |||||||| ||||| ||||||||||||| |||||| ||
Sbjct 2532 GAGTTCTCATGTACCATACAGAAACAGCAAGCTAACACAGCTTCTCCAAACCTCTCTTGG 2591
Query 2310 TGGTCGAGCAAAGACATTGATGTTTGTTCAACTCAATCCTGATATTACTTCATATTCAGA 2369
|| |||||||||||| | |||||||| |||||||| ||||| ||||||||| |||||
Sbjct 2592 AGGACGAGCAAAGACACTAATGTTTGTGCAACTCAACCCTGACGCTACTTCATACTCAGA 2651
Query 2370 GTCAATGAGTACTTTGAAATTCGCAGAGCGTGTCTCTGGAGTTGAG-TTAGGTGCTGCAA 2428
|||||||||||| |||||||| |||||||||||||||||||| || || ||||||||||
Sbjct 2652 GTCAATGAGTACCTTGAAATTTGCAGAGCGTGTCTCTGGAGTCGAACTT-GGTGCTGCAA 2710
Query 2429 AAAGCA-GCAAAGATGGTAGAGACGTTAGAGACTTAATGGAGCAGTTAGGGTCCCTTAAG 2487
| | || | ||||| |||| ||| ||| ||||||| ||||| ||||||| ||||||||||
Sbjct 2711 AGA-CAAGTAAAGAAGGTAAAGATGTTCGAGACTTGATGGAACAGTTAGCGTCCCTTAAG 2769
Query 2488 GACACAATAGCGAGAAAAGACGATGAGATAGAGCGGCTTCA 2528
||||| ||||||||||||||||| ||||||||| | |||||
Sbjct 2770 GACACCATAGCGAGAAAAGACGAAGAGATAGAGAGACTTCA 2810
Score = 630 bits (341), Expect = 2e-179
Identities = 724/907 (80%), Gaps = 34/907 (4%)
Strand=Plus/Plus
Query 1005 AGAGCTTGAAC-AATTTAAAAAGGAGACA-ATGTCTGTTAATACAA-GC-CTTGAAGCAA 1060
||||||||||| ||| ||||| || || || |||| ||| | || || |||| || ||
Sbjct 1260 AGAGCTTGAACAAATGGGAAAAGAAG-CACAT-TCTGCTAA-A-AATGCTCTTG-AGGAA 1314
Query 1061 AA-AATCGAGAGCTTGAAC-AATTTAAAAAGGAGACGGTGACTTTTAATACAAGCCTTGA 1118
|| | | | ||||| ||| ||| ||||| || || ||| |||||||||||||||
Sbjct 1315 AAGATTAAACAGCTTCAACAAATGGAAAAA-GAAACAAAAACTGCTAATACAAGCCTTGA 1373
Query 1119 AGCAAAAAAT-CGAGAGCTTGaaaaaaaTCTGGTCCA-CTGGAAGAGTAAAGCCAAAGAA 1176
|| ||| || | |||||||||| |||| || || | ||||||| ||||| || ||||
Sbjct 1374 AG-GAAAGATCCAAGAGCTTGAACAAAACCTCGT-AATGTGGAAGACTAAAGTCAGAGAA 1431
Query 1177 ATGGAAGAAAAA-TCAGAGTTGAAGAATCGGAGTTGGAGTCAGAAAGAACTTTCGTATAG 1235
|||| ||||||| || |||| || | | || |||||||||||||||||||| ||||
Sbjct 1432 ATGG-AGAAAAAGTCTGAGTCCAACCACCAAAGATGGAGTCAGAAAGAACTTTCCTATAA 1490
Query 1236 AAGCTTTA-TCAGTTTCCAAT-TCAAGGCGCTACAAGAGTTGAGGTTCTGTTCTAA-CTC 1292
|||||||| | | | ||| | || |||| |||| |||||||||| || ||| || ||
Sbjct 1491 AAGCTTTATTGA-TAACCAGTCTC-AGGCACTACTGGAGTTGAGGTCCTATTC-AAGATC 1547
Query 1293 CATCAAACAAGAAATACTAAAAGTTCAAGATAAGTATACA-ACAGAGTTTAGTCAATTAG 1351
|||||| ||||||||||| || || ||||| || |||||| || |||| || ||| |||
Sbjct 1548 CATCAAGCAAGAAATACTGAAGGTACAAGAGAACTATACAGAC-CAGTTCAGCCAACTAG 1606
Query 1352 GGAGGAAATTGCTTGAACTT-GGAGATGCTGCTGCAAACTATCACGAAGTCCTAACTGAA 1410
| | |||| || |||||||| | | ||||||||| ||||||||||| || |||||||||
Sbjct 1607 GAAAGAAACTGATTGAACTTAGCA-ATGCTGCTGAAAACTATCACGCTGTACTAACTGAA 1665
Query 1411 AACCAAAAGCTCTTCAATGAACTTCAGGAGCTAAAAGGCAACATTAGAGTGTATTGTCGG 1470
|||| ||||| ||||| || ||||||||||||||||| ||||| ||||||| ||| |||
Sbjct 1666 AACCGGAAGCTTTTCAACGAGCTTCAGGAGCTAAAAGGAAACATCAGAGTGTTTTGCCGG 1725
Query 1471 GTGAGGCCTTT-CTTGCGAGGGCAAGGTGCATCAAAAACTGTGGTAGAACACATTGGTGA 1529
||||||||||| ||| | | || |||||| |||| || ||||| || | | |||||
Sbjct 1726 GTGAGGCCTTTCCTT-CCTGCACAGGGTGCAGCAAACACAGTGGTCGAGTATGTCGGTGA 1784
Query 1530 TCATGGGGAGTTGGTAGTT-CTCAATCCAACAAAACCTGGGAAAGATGGTCTTCGAAAAT 1588
|||| || || |||||| | ||||||||| | ||| |||||||| |||||||| | |
Sbjct 1785 AGATGGAGAATTAGTAGTTAC-CAATCCAACTAGACCCGGGAAAGACGGTCTTCGCCAGT 1843
Query 1589 TTAAGTTCAATAAGGTCTACAGTCCTGCCT-CTACTCAAGCTGAGGTATTTTCAGATATA 1647
|||||||||| ||||| || ||||| || || | |||||||| || |||||||| |||
Sbjct 1844 TTAAGTTCAACAAGGTGTATAGTCC-AACTGCTTCACAAGCTGACGTCTTTTCAGACATA 1902
Query 1648 AAACCTCTTGTTCGATCAGTTCTCGACGGGTACAATGTATGTATCTTTGCATATGGTCAG 1707
| ||| || ||| | ||||| || || ||||||||||| ||||| ||||||||||| |||
Sbjct 1903 AGACCGCTGGTTAGGTCAGTACTTGATGGGTACAATGTTTGTATATTTGCATATGGCCAG 1962
Query 1708 ACAGGATCCGGGAAAACTTACACAATGACTGGTCCAGATGGAGCAAGCGAAGAAGAGTGG 1767
|||||||| ||||||||||| ||||||||||||||||||||| |||| |||||||| |||
Sbjct 1963 ACAGGATCAGGGAAAACTTATACAATGACTGGTCCAGATGGATCAAGTGAAGAAGACTGG 2022
Query 1768 GGAGTAAACTATCGTGCTCTCAATGACCTCTTCAAAATCTCTCAAACCCGAAAAAGCAAC 1827
|||||||| ||||| ||||||||||| || || ||||||||||| || |||| | |||
Sbjct 2023 GGAGTAAATTATCGCGCTCTCAATGATCTTTTTAAAATCTCTCAGTCCAGAAAGGGAAAC 2082
Query 1828 ATAGCGTATGAAGTCGGGGTGCAAATGGTGGAGATATACAATGAACAAGTGCGCGATTTA 1887
||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||| |
Sbjct 2083 ATATCGTATGAAGTCGGGGTGCAAATGGTGGAGATATATAATGAACAAGTGCTCGATCTG 2142
Query 1888 CTCTCTG 1894
|| ||||
Sbjct 2143 CTGTCTG 2149
Score = 390 bits (211), Expect = 3e-107
Identities = 352/419 (84%), Gaps = 14/419 (3%)
Strand=Plus/Plus
Query 120 AGATCCATCATCCCCTGGATCAATGC-TCCATGGAGGACACAAGTCCCACGAGGCTTTCC 178
|||||||| ||| ||||||||||||| | |||||||||||||||| || |||| |||||
Sbjct 408 AGATCCATTATCTCCTGGATCAATGCAT-CATGGAGGACACAAGTTTCATGAGGTTTTCC 466
Query 179 AAATGAAACAGTGCCGATT-TGATCTCCAAGCCGCAAAGATTTCAGAACTGATGAAATCA 237
||||||||||| | || || |||||| ||||| |||||||||| ||| |||||||||||
Sbjct 467 AAATGAAACAGGGGCG-TTATGATCTTCAAGCTTCAAAGATTTCTGAAATGATGAAATCA 525
Query 238 AACAATTTAGATAATGCTCCCACGCAGTCACTT-CTAAGTATCGTT-AATGGAATTCTTG 295
| | |||||||||||||| ||||||||| || ||||| || || ||||||||||| |
Sbjct 526 AGTAGCTTAGATAATGCTCCTACGCAGTCA-TTGCTAAGCGTC-TTGAATGGAATTCTAG 583
Query 296 ATGAAACTATTGAGAGAAAGAATGGTGAAATCCCTCAGCGTGTAGCAT-CTCTGCTGAGG 354
|||||| ||| || ||||||||||||||||||||||||||||| |||| | ||| | ||
Sbjct 584 ATGAAAGTATCGAAAGAAAGAATGGTGAAATCCCTCAGCGTGTGGCATGC-CTGTTAAGA 642
Query 355 AAAGTTGTGCAGGAAATCGAGCGACGTATTTCAACTCAATCTGAGCATCTAAGAACGCAA 414
||||| |||||||| || ||||| ||||| ||||||||| |||| |||||||||||||||
Sbjct 643 AAAGTCGTGCAGGAGATTGAGCGGCGTATATCAACTCAAGCTGAACATCTAAGAACGCAA 702
Query 415 AACAGTGTGTTT-AAAGCTCGTGAGGAGAAGTACCAGTCAAGGATCAAAGTTCTTGAAAC 473
|||| | | ||| ||| |||| ||||| || ||||||||||||||||| || |||||| |
Sbjct 703 AACAATAT-TTTCAAAACTCGCGAGGAAAAATACCAGTCAAGGATCAATGTCCTTGAAGC 761
Query 474 CTTAGCTTCAGGAACTAGTGAAGAAAATGAGATTGCTACA-AGACAACTTCGACGGATA 531
|||||| ||||||||| ||| |||| | |||||||| ||| | ||| ||| ||| ||||
Sbjct 762 CTTAGCATCAGGAACTGGTGTAGAACACGAGATTGCAACACA-ACAGCTTAGACAGATA 819
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 148544318223
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5