BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg335111 Length=2181 Score E Sequences producing significant alignments: (Bits) Value AT1G18550.1 | Symbols: | ATP binding microtubule motor family ... 3504 0.0 > AT1G18550.1 | Symbols: | ATP binding microtubule motor family protein | chr1:6381503-6384340 REVERSE LENGTH=2331 Length=2331 Score = 3504 bits (1897), Expect = 0.0 Identities = 2094/2188 (96%), Gaps = 17/2188 (1%) Strand=Plus/Plus Query 1 ATGCCGGTATCTACTCGATCCAAGGTGATGAAACAGGAGCGAAATGAGCAAGAAAACACA 60 |||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||| Sbjct 1 ATGCCGGTATCTACTCGATCTAAGGTGATGAAACAGGAGCGAAACGAGCAAGAGAACACA 60 Query 61 AATCTGAATCTTCCGTTGAGAAATCCACATCAAGGGTTGAAAGAAAAGATGAGAGCTTTG 120 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 61 AATCTGAATCTTCCGTTGAGAAATCCACATCAAGGGTTGAAGGAAAAGATGAGAGCTTTG 120 Query 121 ACTCTCTTGTACGAGCAGCAAAAGAGAGCCTCTTTCTCTCTCAGGAA-CC----C-TAAT 174 ||||||||||||||||||||||||||||||||||||||||||||||| || | |||| Sbjct 121 ACTCTCTTGTACGAGCAGCAAAAGAGAGCCTCTTTCTCTCTCAGGAACCCTAATCATAAT 180 Query 175 CAGTCTCCTAAACCCGAAGACCAGAGATTCAAGACTCAGCTGCTTGATTCTTGCAAGAAA 234 |||||||| ||||| ||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct 181 CAGTCTCCGAAACCTGAAGATCAGAGATTCAAGACTCAGCTGCTTGATTCTTCCAAGAAA 240 Query 235 GGAGACAGATTTCATCGCCAAGACGGTAAAGATTCTAAATTTATTGAAGAAGAAACCAAA 294 ||||||||||||||||||| |||||||||||||||| ||| |||||||||| |||||| Sbjct 241 GGAGACAGATTTCATCGCCTGGACGGTAAAGATTCTACCTTTGTTGAAGAAGATACCAAA 300 Query 295 GAGAACAATGTATTCGAAGCAGATCGGATTTTCGGGGTTAATTCGGTTCCTGTTAAGCCT 354 |||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||| Sbjct 301 GAGAACAATGTATTTGAAGCAGATCGGATTTTTGGGGTTAGTTCGGTTCCTGTTAAGCC- 359 Query 355 AGTAGTGGTGTGATTAGAAAGCTCTCAATGGGTATTGGAGCTAGAAACGTTACAGAAGCT 414 ||||||||||||||| ||||| |||||||||| |||||||||||||||| | |||||| Sbjct 360 --TAGTGGTGTGATTAGGAAGCTTTCAATGGGTAATGGAGCTAGAAACGTTTCGGAAGCT 417 Query 415 GAAAAATTGGATAGTCTTGATGCTTCTGTGAGTCGGATTTTGGTGTTTGTTAGGCTTAGA 474 || |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 418 GAGAAATTGGAGAGTCTTAATGCTTCTGTGAGTCGGATTTTGGTGTTTGTTAGGCTTAGA 477 Query 475 CCAATGGGGAAAAAGGAAAGAGAGAATGGGGCAAGATGTTGTGTCAAGATTTTGAATAAA 534 |||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| Sbjct 478 CCAATGGGGAAAAAGGAAAGAGAGAATGGGTCAAGGTGTTGTGTCAAGGTTTTGAATAAA 537 Query 535 AGAGATGTTTATCTAACGGAGTTTACGAATGAGAACGATTACCTTAGGCTTAAGAGGCTC 594 ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 538 AGAGATGTTTACCTAACGGAGTTTACGAATGAGAATGATTACCTTAGGCTTAAGAGGCTC 597 Query 595 CGTGTTCGTCATTTCACTTTTGATTCTTCATTTCCTGAAACTACAACACAACAAGAGGTT 654 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 598 CGTGTTCGTCATTTCACTTTTGATTCTTCATTTCCTGAAACTACCACACAACAAGAGGTT 657 Query 655 TATTCCACCACAACAGGAGATCTTGTTGAAGCAGTTCTTGAAGGAAGAAATGGTTCGGTT 714 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 658 TATTCCACCACAACAGGAGATCTTGTTGAAGCAGTTCTTGAAGGAAGAAATGGTTCAGTT 717 Query 715 TTCTGCTACGGTGCTACGGGAGCAGGCAAGACTTATACGATGTTAGGGACAATGGAGAAT 774 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 718 TTCTGCTACGGTGCTACGGGAGCAGGCAAGACTTATACGATGTTAGGGACAATGGAGAAT 777 Query 775 CCAGGTGTTATGGTTTTAGCAATCAAAGATTTGTTTGCTAAAGTTAGACAGAGAAGCTTA 834 |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 778 CCAGGTGTAATGGTTCTAGCAATCAAAGATTTGTTTGCTAAAGTTAGACAGAGAAGCTTA 837 Query 835 GATGGGAACCATGTTGTTCATCTTTCTTATCTTGAGGTTTATAATGAAACTGTTCGAGAT 894 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 838 GATGGGAACCATGTTGTTCATCTTTCTTATCTTGAGGTTTATAATGAAACTGTTAGAGAT 897 Query 895 TTGCTTTCACCTGGTAGACCTCTCATTCTCCGCGAAGATAAGCAGGGAATTGTGGCTGCT 954 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 898 TTGCTTTCACCTGGTAGACCTCTCATTCTCCGTGAAGATAAGCAGGGAATTGTGGCTGCT 957 Query 955 GGTCTCACTCAATATAGAGCTTACTCAACAGATGAGGTTATGGCTTTGCTCCAAAGGGGA 1014 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 958 GGTCTCACTCAATATAGAGCTTACTCAACAGATGAGGTTATGGCTTTGCTTCAAAGGGGA 1017 Query 1015 AATCAAAACAGAACTACTGAGCCAACTCGTTGCAATGAAACATCTTCTCGCTCACACGCC 1074 ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||| Sbjct 1018 AATCAAAACAGAACTACCGAGCCTACTCGTTGCAATGAAACATCTTCTCGCTCACATGCC 1077 Query 1075 ATCCTTCAGGTAATAGTGGAGTATAAGACTAGAGATGCTTCCATGAATATCATCAGCCGG 1134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1078 ATCCTTCAGGTAATAGTGGAGTATAAGACTAGAGATGCTTCCATGAATATCATCAGCCGG 1137 Query 1135 GTAGGAAAGCTATCTCTCATTGATCTTGCCGGTTCTGAAAGAGCGCTAGCAACTGATCAA 1194 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1138 GTAGGAAAGCTATCTCTCATTGATCTTGCGGGTTCTGAAAGAGCGCTAGCAACTGATCAA 1197 Query 1195 AGGACACTCAGATCACTGGAAGGAGCAAATATAAACAGATCACTTCTCGCATTAAGTAGT 1254 ||||| ||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| Sbjct 1198 AGGACGCTCAGATCACTGGAAGGTGCAAACATAAACAGATCACTTCTTGCATTAAGTAGT 1257 Query 1255 TGCATTAACGCGCTTGTGGAAGGCAAGAAACATATTCCTTACAGAAACTCAAAGCTCACA 1314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1258 TGCATTAACGCGCTTGTGGAAGGCAAGAAACATATTCCTTACAGAAACTCAAAGCTCACA 1317 Query 1315 CAACTACTCAAAGACTCACTAGGCGGCTCGTGTAACACGGTGATGATTGCTAATATAAGT 1374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1318 CAACTACTCAAAGACTCACTAGGCGGCTCGTGTAACACGGTGATGATTGCTAATATAAGT 1377 Query 1375 CCAAGCAGTCAATCTTTTGGTGAAACACAAAACACTCTCCATTGGGCTGATCGAGCCAAG 1434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1378 CCAAGCAGTCAATCTTTTGGTGAAACACAAAACACTCTCCATTGGGCTGATCGAGCCAAG 1437 Query 1435 GAGATTCGTGTGAAGGGATGTGAAGTAAATGAAGAGGTGGTTCAAACGGGTGAAGAAGAC 1494 |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| Sbjct 1438 GAGATTCGTGTGAAGGAATGTGAAGTAAATGAAGAGGTGGTTCAAGTGGGTGAAGAAGAA 1497 Query 1495 GGGGCTGATCAGGCCAAGCTCTTGTTAGAGCTTCAAAAAGAGAACT-GTGAATTGCGTGT 1553 || ||||||||||| ||||| |||||||| |||||||||||||| | ||||||||||||| Sbjct 1498 GGAGCTGATCAGGCTAAGCTTTTGTTAGAACTTCAAAAAGAGAA-TAGTGAATTGCGTGT 1556 Query 1554 CCAGCTCGCGAAGCAGCAGCAAAAGCTTTTGACTCTTCAAGCAGAGAACTTAGCCGCTGC 1613 |||||| || |||||||||||||||||||||||||| |||||||||||| |||||||||| Sbjct 1557 CCAGCTAGCAAAGCAGCAGCAAAAGCTTTTGACTCTACAAGCAGAGAACATAGCCGCTGC 1616 Query 1614 TACTaacaacaacaacaacaacaTTTCTCTGACACCTCCATCAATCTCATCTCTAATGAC 1673 || |||||||||||||| ||||||||||||||||||||||||||||||| ||||| Sbjct 1617 TAATAACAACAACAACA------TTTCTCTGACACCTCCATCAATCTCATCTCTTATGAC 1670 Query 1674 TCCACCATCTGCGTTAACAGCTCAGCAGAAGAAGAAACCAAGGCATTCATTGTTATCAGG 1733 |||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1671 TCCACCGTCTGCATTAACAGCTCAGCAGAAGAAGAAACCAAGGCATTCGTTGTTATCAGG 1730 Query 1734 GACATGTTTCACACCAGAATCATCCAAAAGGACAAAAGCAGAAGAAGCTGTGAAGGAACT 1793 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1731 GACATGTTTCACACCAGAATCATTGAAAAGGACAAAAGCAGAAGAAGCTGTGAAGGAACT 1790 Query 1794 TCAGCTGACTGTAAAGGCATTAAAGATGGAGATGGAGAGAATGAAGAGGGAACATGGGTT 1853 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| || Sbjct 1791 TCAGCTGACTGTTAAGGCATTGAAGATGGAGATGGAGAGAATGAAGAGGGAACATGGTTT 1850 Query 1854 GCAGATGAAGAAGCAAAAAGAAGAATTAATGAAAGATCTTTGTAGTAGAAAGAGCGAGAA 1913 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1851 GCAGATGAAGAAGCAAAAAGACGAATTAATGAAAGATCTTTGTAGTAGAAAGAGCGAGAA 1910 Query 1914 AACTCCAGAAAGAGGCAAAGAAACAAGGAGGATTGTCACAAGAGGGAGCTTGAGACCAAA 1973 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1911 AACTCCAGAAAGATGCAAAGAAACAAGGAGGATTGTCACAAGAGGGAGCTTGAGACCAAA 1970 Query 1974 GGAGAAGGAGAAGGAGCTGAAAAGCCCGAGTCACCGGTTTGCATCTCCAGCTGCAGCAGC 2033 ||||||||| ||||| |||||||| |||||||| |||||||||||||||| ||||||||| Sbjct 1971 GGAGAAGGAAAAGGAACTGAAAAGTCCGAGTCATCGGTTTGCATCTCCAGTTGCAGCAGC 2030 Query 2034 TaaaaaaaGAAGCTTTTGGGACATAACCGTAGCTAATACTAGTCCTGCGTCGGATAGAAG 2093 |||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct 2031 TAAAAAGAGAAGCTTTTGGGACATAACCGTTGCTAATACTAGTCCTGCGTTGGATAGAAG 2090 Query 2094 GAAAACGAGAAGCCACGGTCTTGTTCATCAAGAAGCTCCTTCAAAACTGCTTCAGCCCGG 2153 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2091 GAAAACGAGAAGCCACGGTCTTGTTCATCAAGAAGCTCCTTCAAAACTGCTTCAGCCCGG 2150 Query 2154 GTTTGCTCGTCCACACATGAAGCATTAA 2181 |||||||||||||||||||||||||||| Sbjct 2151 GTTTGCTCGTCCACACATGAAGCATTAA 2178 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 108182174475 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5