BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg335228
Length=2259
Score E
Sequences producing significant alignments: (Bits) Value
AT1G19780.1 | Symbols: ATCNGC8, CNGC8 | cyclic nucleotide gated... 3681 0.0
AT1G15990.1 | Symbols: ATCNGC7, CNGC7 | cyclic nucleotide gated... 1916 0.0
> AT1G19780.1 | Symbols: ATCNGC8, CNGC8 | cyclic nucleotide gated
channel 8 | chr1:6833885-6836578 REVERSE LENGTH=2262
Length=2262
Score = 3681 bits (1993), Expect = 0.0
Identities = 2170/2257 (96%), Gaps = 5/2257 (0%)
Strand=Plus/Plus
Query 1 ATGTACAAATCTCAATATATAGGTGGCCAGAGAGAAAAATTCGTAAGATTAGATGATACA 60
||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct 1 ATGTACAAATCTCAATATATAAGTGGCCATAGAGAAAAATTCGTAAGATTAGATGATACA 60
Query 61 GATTCGAGGGTATCAATGTCATCTAATGCTACGGGAATGAAGAAGCGATCATGTTTTGGA 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 GATTCGAGGGTTTCAATGTCATCTAATGCTACGGGAATGAAGAAGCGATCATGTTTTGGA 120
Query 121 TTGTTTAACCTAACTAGTCGTGGAGGAGGGAAGACAAAGAACACATCGAAATCCTTTCGA 180
||||||||| ||||||||||||||||||| ||||||||||||||||| ||||| ||||||
Sbjct 121 TTGTTTAACGTAACTAGTCGTGGAGGAGGAAAGACAAAGAACACATCAAAATCATTTCGA 180
Query 181 GAAGGCGTTAAAATCGGATCAGAGGGTCTAAAAACGATAGGAAAATCATTGACATCAGGT 240
||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 181 GAAGGTGTTAAAATCGGATCAGAGGGTCTAAAAACGATCGGAAAATCATTCACATCAGGT 240
Query 241 GTGACAAGAGCTGTTTTCCCTGAAGATCTAAGAGTATCTGAGAAGAAAATCTTTGATCCT 300
|| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct 241 GTAACAAGAGCTGTTTTCCCTGAAGATCTAAGAGTCTCCGAGAAGAAAATCTTTGATCCT 300
Query 301 CAAGACAAAACACTTTTATTATGGAACAGAATGTTTGTTATCTCTTGCATTCTTGCGGTC 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 301 CAAGACAAAACACTTTTATTATGGAACAGAATGTTTGTTATCTCTTGCATTCTTGCTGTC 360
Query 361 TCTGTTGATCCTCTGTTTTTCTATCTACCGATTGTCGATAACTCAAAGAACTGCATTGGA 420
||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||
Sbjct 361 TCTGTTGATCCTCTGTTCTTCTATCTCCCTATTGTCGATAACTCAAAGAACTGCATTGGG 420
Query 421 ATCGACTCTAAATTAGCTGTGACAACTACTACTCTAAGAACGATCATCGATGTTTTTTAT 480
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 421 ATTGACTCTAAATTAGCTGTGACAACTACTACTCTAAGAACGATCATCGATGTTTTTTAT 480
Query 481 CTTACGCGAATGGCTCTTCAGTTTCGTACAGCTTATATTGCTCCTTCTTCTCGTGTGTTT 540
||||| ||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||
Sbjct 481 CTTACACGAATGGCTCTTCAGTTCCGTACCGCTTACATTGCTCCTTCTTCTCGTGTGTTT 540
Query 541 GGAAGAGGTGAGCTTGTGATCGACCCTGCAAAGATTGCTGAACGGTATTTGACTCGCTAT 600
||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct 541 GGAAGAGGTGAGCTTGTGATCGACCCTGCAAAGATCGCTGAACGGTATTTGACTCGTTAT 600
Query 601 TTCATTGTCGATTTCCTCGCGGTTCTTCCCTTACCTCAGATTGCGGTGTGGAAGTTTCTT 660
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 601 TTCATTGTCGATTTCCTCGCGGTTCTTCCTTTACCTCAGATTGCTGTGTGGAAGTTTCTT 660
Query 661 CACGGATCTAAAGGAACAGATGTATTACCAACAAAACAGGCGCTATTACACATTGTCATC 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 CACGGATCTAAAGGAACAGATGTATTACCAACAAAACAGGCGCTATTACACATTGTCATC 720
Query 721 ACACAGTACATACCAAGATTCGTTAGGTTTATTCCATTAACATCGGAGCTCAAGAAAACA 780
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct 721 ACACAGTACATACCAAGATTCGTTAGGTTTATTCCATTAACTTCAGAGCTCAAGAAAACA 780
Query 781 GCAGGAGCTTTCGCTGAAGGTGCTTGGGCTGGTGCTGCTTATTACCTCCTCTGGTATATG 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 781 GCAGGAGCTTTCGCTGAAGGTGCTTGGGCTGGTGCTGCTTATTACCTCCTCTGGTATATG 840
Query 841 CTTGCAAGCCACATTACTGGAGCGTTCTGGTACATGTTGTCAGTGGAACGTAACGATACA 900
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 841 CTTGCAAGTCACATAACTGGAGCGTTCTGGTACATGTTGTCAGTGGAACGTAACGATACA 900
Query 901 TGCTTGAGATCCGCTTGTAAAGTCCAGCCTGATCCCAAGGTTTGTGTTCAGATTCTGTAT 960
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 901 TGCTTGAGATCCGCTTGTAAAGTCCAGCCTGATCCCAAGGTCTGTGTTCAGATTCTTTAT 960
Query 961 TGTGGCAGCAAATTAATGAGCAGTCGCGACACCGACTGGATCAAATCAGTCCCTGATCTT 1020
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 961 TGTGGCAGCAAATTAATGAGCAGTCGCGAAACCGACTGGATCAAATCAGTCCCTGATCTT 1020
Query 1021 TTCAAGAACAATTGTTCTGCGAAAAGCGATGAGTCCAAATTCAATTACGGAATCTATAGC 1080
|| ||||||||||||||||| |||||||||||||| |||||||| ||||| |||||||||
Sbjct 1021 TTTAAGAACAATTGTTCTGCTAAAAGCGATGAGTCTAAATTCAACTACGGGATCTATAGC 1080
Query 1081 CAGGCTGTGTCTTCTGGAATTGTATCTTCGACAACGTTTTTCTCCAAGTTTTGTTATTGT 1140
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1081 CAGGCTGTGTCTTCCGGTATTGTATCTTCGACAACGTTTTTCTCCAAGTTTTGTTATTGT 1140
Query 1141 CTTTGGTGGGGTCTCCAAAATCTCAGTACGTTAGGTCAAGGGCTGCAAACAAGTACCTAT 1200
|| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 1141 CTATGGTGGGGTCTCCAAAATCTCAGCACGTTAGGTCAAGGGCTGCAAACAAGTACATAT 1200
Query 1201 CCAGGAGAAGTTTTGTTTTCAATTGCAATTGCTGTAGCCGGACTTCTCTTGTTTGCTCTT 1260
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 1201 CCAGGAGAAGTTTTGTTTTCAATTGCAATTGCTGTAGCTGGACTTCTTTTGTTTGCTCTT 1260
Query 1261 CTCATCGGGAATATGCAAACTTATCTGCAGTCACTTACGGTTCGTTTAGAGGAAATGAGG 1320
||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct 1261 CTCATTGGGAATATGCAAACTTATCTTCAGTCACTTACGGTTCGCTTAGAGGAAATGAGG 1320
Query 1321 ATTAAAAGACGCGATTCCGAACAGTGGATGCATCACAGGTCACTTCCACAAAACCTGAGG 1380
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1321 ATTAAAAGACGTGATTCCGAACAGTGGATGCATCACAGGTCACTTCCACAAAACCTGAGG 1380
Query 1381 GAACGAGTCAGACGTTATGATCAATACAAATGGTTAGAAACAAGAGGAGTCGACGAAGAA 1440
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1381 GAACGAGTCAGACGTTATGATCAATACAAATGGTTGGAAACAAGAGGAGTCGACGAAGAA 1440
Query 1441 AACATAGTCCAGAGTTTACCAAAAGATCTTAGAAGAGACATCAAACGCCATCTCTGTCTG 1500
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1441 AACATAGTCCAGAGTTTACCAAAAGATCTTAGAAGAGACATCAAACGCCATCTCTGTCTA 1500
Query 1501 AACTTAGTTCGCAGGGTTCCTCTGTTTGCTAATATGGATGAGAGACTACTAGACGCAATA 1560
|| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1501 AATTTAGTTCGCAGGGTTCCTCTGTTTGCTAATATGGATGAGAGATTACTAGACGCAATA 1560
Query 1561 TGTGAGAGACTAAAGCCAAGTCTATACACAGAGAGCACTTACATAGTGCGAGAAGGAGAC 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1561 TGTGAGAGACTAAAGCCAAGTCTATACACAGAGAGCACTTACATAGTGCGAGAAGGAGAC 1620
Query 1621 CCGGTTAACGAAATGCTGTTCATAATCCGAGGCCGGTTAGAGAGTGTAACGACAGATGGT 1680
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct 1621 CCGGTTAACGAAATGCTCTTCATAATCCGAGGCCGGTTAGAGAGTGTAACAACAGATGGT 1680
Query 1681 GGAAGAAGTGGTTTCTTTAACAGAGGTTTATTGAAAGAAGGCGACTTTTGTGGTGAAGAG 1740
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1681 GGAAGAAGCGGTTTCTTTAACAGAGGTTTATTGAAAGAAGGTGACTTTTGTGGTGAAGAG 1740
Query 1741 CTTCTGACTTGGGCACTTGACCCTAAAGCAGGCTCAAACTTGCCTTCTTCCACAAGAACA 1800
||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct 1741 CTTCTGACTTGGGCACTTGACCCTAAAGCAGGCTCAAACTTACCTTCTTCCACACGAACA 1800
Query 1801 GTGAAGGCTCTAACTGAAGTAGAGGCTTTCGCTTTAGAAGCTGAAGAGCTCAAATTTGTG 1860
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 1801 GTGAAGGCTCTAACTGAAGTAGAGGCTTTCGCTTTAGAAGCGGAAGAGCTCAAGTTTGTG 1860
Query 1861 GCTAGTCAGTTCAGGCGTCTTCACAGTCGTCAAGTCCAACAAACGTTCAGGTTTTACTCT 1920
|||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||
Sbjct 1861 GCTAGTCAGTTCAGGCGTCTTCACAGTCGTCAGGTTCAACAAACTTTCAGGTTTTACTCT 1920
Query 1921 CAACAATGGAGGACTTGGGCTGCTTGTTTTATCCAAGCCGCTTGGCGTAGACACTTAAGA 1980
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 1921 CAACAATGGAGGACTTGGGCTGCTTGTTTCATCCAAGCCGCTTGGCGTAGACATTTAAGA 1980
Query 1981 AGGAAAATCGCAGAGCTTAGACGTAaagaagaagaagaagaa-A--TGGATTATGAAGAT 2037
|||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct 1981 AGGAAAATCGCAGAGCTTAGACGTAAAGAAGAAGAAGAAGAAGAAATGGATTATGAAGAT 2040
Query 2038 GATTACGAGTATGATGATAATATGGGTGGTGTGGTTACAAGGAGTGATAGTTCTGCTGGA 2097
||| | | ||||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct 2041 GATGAATATTATGATGATAATATGGGTGGTATGGTTACAAGGAGTGATAGTTCTGTTGGA 2100
Query 2098 TCAAGTTCTAGATTACGTTCCACGGTATTTGCATCAAGATTTGCTGCTAACGCGCTTAAG 2157
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2101 TCAAGTTCTACATTACGTTCCACGGTATTTGCATCAAGATTTGCTGCTAACGCGCTTAAG 2160
Query 2158 GGTCATAAGCTAAGGGTCTCCGAGAGTTCAAAGAGTTTGGTGAATCTAAGAAAGCCATCA 2217
|||||||| ||||||||| ||||||||||||||||||| ||||| ||| ||||||||||
Sbjct 2161 GGTCATAAACTAAGGGTCACCGAGAGTTCAAAGAGTTTAATGAATTTAACAAAGCCATCA 2220
Query 2218 GAACCTGA-TTTCGAGGCTCTTGATACAGAGGATTTG 2253
|||||||| ||| ||||||||||||||||| || |||
Sbjct 2221 GAACCTGACTTT-GAGGCTCTTGATACAGATGACTTG 2256
> AT1G15990.1 | Symbols: ATCNGC7, CNGC7 | cyclic nucleotide gated
channel 7 | chr1:5491304-5493772 REVERSE LENGTH=2130
Length=2130
Score = 1916 bits (1037), Expect = 0.0
Identities = 1785/2135 (84%), Gaps = 96/2135 (4%)
Strand=Plus/Plus
Query 143 GAGGAGG-GAAGACA-AAGAACA-CATCGAAATCCTTTC-GAGAAGGCGTT---AAAATC 195
||||||| ||| | | ||||| | |||| |||| ||||| | ||||| ||| ||||||
Sbjct 44 GAGGAGGTGAA-A-AGAAGAA-AGCATCCAAAT-CTTTCAGGGAAGGAGTTAAAAAAATC 99
Query 196 GGATCAGAGGGTCTAAAAACGATAGGAAAATCATTGACATCAGGTGTGACAAGAGCTGTT 255
||||||| ||||||| ||| || || | | | ||| || | |||||||| |||
Sbjct 100 AGATCAGAAGGTCTAATAACCATCGG----T-A---A-ATC-CGT-T-ACAAGAGCGGTT 147
Query 256 TTCCCTGAAGATC-TAAGAGTATCTGAGAAGAAAATCTTTGATCCTCAAGACAAAACACT 314
|| || ||||| | ||||| || | |||||||||||||||||||||||||||||||||||
Sbjct 148 TTTCCAGAAGA-CTTAAGAATAACAGAGAAGAAAATCTTTGATCCTCAAGACAAAACACT 206
Query 315 TTTATTATGGAACAGAATGTTTGTTATCTCTTGCATTCTT-GCGGTCTCTGTTGATCCTC 373
| | ||||||||||| |||| || || || || ||| || || |||||||||||||||
Sbjct 207 TCTCGTATGGAACAGATTGTTCGTCATTTCGTGTATT-TTAGCTGTCTCTGTTGATCCTT 265
Query 374 TGTTTTTCTATCTACCGATTGTCGATAACTCA--AAGAA-CTGCATTGGAATCGACT-CT 429
|||| |||||||| || ||||||||||| || ||| | ||| || || || || | |
Sbjct 266 TGTTCTTCTATCTTCCCATTGTCGATAATTCCGGAAGCAGCTGTATAGGGATTGA-TACG 324
Query 430 AAATTAGCTGTGACAACTACTACTCTAAGAACGATCATCGATGTTTTTTATCTTA-CGCG 488
||| ||||||| ||||| || ||||| ||||| || | || |||||||| |||| | |
Sbjct 325 AAACTAGCTGTTACAACGACGACTCTTAGAACCATTGTTGACGTTTTTTA-CTTAACTAG 383
Query 489 AATGGCTCTTCAGTTTCGTACAGCTTATATTGCTCCTTCTTCTCGTGTGTTTGGAAGAGG 548
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||
Sbjct 384 AATGGCTCTTCAGTTTCGTACAGCTTATATAGCTCCTTCTTCTCGTGTGTTTGGTCGTGG 443
Query 549 TGAGCTTGTGATCGACCCTGCAAAGATTGCTGAACGGTATTTGACTCGCTATTTCATTGT 608
|||||||||||| || ||||||||||| |||||||| ||||| || || |||||| | ||
Sbjct 444 TGAGCTTGTGATTGATCCTGCAAAGATCGCTGAACGCTATTTAACCCGTTATTTCGTCGT 503
Query 609 CGATTTCCTCGCGGTTCTTCCCTTACCTCAGATTGCGGTGTGGAAGTTTCTTCACGGATC 668
|||||| || || || || || ||||| |||||||| |||||||||||||||||||| ||
Sbjct 504 CGATTTTCTTGCAGTGCTGCCTTTACCGCAGATTGCAGTGTGGAAGTTTCTTCACGGGTC 563
Query 669 TAAAGGAACAGATGTATTACCAAC-AAAACAGGCGCTATT-ACACATTGTCATCACACAG 726
||||||| | ||||| |||||||| ||||| ||| | || | ||||||| || |||
Sbjct 564 TAAAGGATCGGATGTGTTACCAACGAAAAC-GGCATTGTTGA-ACATTGTAATTGTGCAG 621
Query 727 TACATACCAAGATTCGTTAGGTTTATTCCATTAACATCGGAGCTCAAGAAAACAGCAGGA 786
|| || || |||||||| ||||||||||| |||||||| ||| | |||||||| ||||||
Sbjct 622 TATATTCCGAGATTCGTGAGGTTTATTCCGTTAACATCAGAGTTGAAGAAAACTGCAGGA 681
Query 787 GCTTTCGCTGAAGGTGCTTGGGCTGGTGCTGCTTATTACCTCCTCTGGTATATGCTTGCA 846
||||| || ||||| ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 682 GCTTTTGCCGAAGGAGCTTGGGCTGGTGCTGCTTATTATCTTCTCTGGTATATGCTTGCA 741
Query 847 AGCCACATTACTGGAGCGTTCTGGTACATGTTGTCAGTGGAACGTAACGATACATGCTTG 906
|||||||| ||||||||||| |||||||||||||||||||| ||||||||||| || |||
Sbjct 742 AGCCACATAACTGGAGCGTTTTGGTACATGTTGTCAGTGGAGCGTAACGATACTTG-TTG 800
Query 907 -AGATCCGCTTGTAAAGTCCAGCCTGATCC-CAAGGTTTGTGTTCAGATTCTGTATTGTG 964
|||| || |||||||| ||||| ||||| | | | ||||||||||||||||||||||
Sbjct 801 GAGATTTGCGTGTAAAGTTCAGCCAGATCCGCGAC-TCTGTGTTCAGATTCTGTATTGTG 859
Query 965 GCAGC-AAATTAATGAGCAGTCGCGACACCGACTGGATCAAATCAGTCCCTGATCTT-TT 1022
| | | ||||| |||||||| | || || || ||||||||| |||||||||| ||| ||
Sbjct 860 GGA-CTAAATTTGTGAGCAGTGGAGAAACTGAATGGATCAAAACAGTCCCTGAGCTTCTT 918
Query 1023 CAAGAACAATTGTTCTGCGAAAAGC-GATGAGTCCAAA-TTCAATTACGGAATCTATAGC 1080
|||| |||||||||||| ||| || ||||| || ||| || || || || || || |
Sbjct 919 -AAGAGCAATTGTTCTGCTAAA-GCAGATGATTC-AAAGTTTAACTATGGGATATACGGT 975
Query 1081 CAGGCTGTGTCTTCTGGAATTGTATCTTCGACAACGTTTTTCTCCAAGTTTTGTTATTGT 1140
|||||| | ||||| || |||||||| || ||||| |||||||||||||| |||||||||
Sbjct 976 CAGGCTATATCTTCAGGCATTGTATCATCAACAACATTTTTCTCCAAGTTCTGTTATTGT 1035
Query 1141 CTTTGGTGGGGTCTCCAAAATCTCAGTACGTTAGGTCAAGGGCTGCAAACAAGTACCTAT 1200
|| ||||||||||| ||||||||||| |||||||||||||||||||| |||||||| | |
Sbjct 1036 CTATGGTGGGGTCTTCAAAATCTCAGCACGTTAGGTCAAGGGCTGCAGACAAGTACATTT 1095
Query 1201 CCAGGAGAAGTTTTGTTTTCAATTGCAATTGCTGTAGCCGGACTTCT-CTTGTTTGCTCT 1259
|||||||| ||||||||||| ||||| |||||| |||| || ||||| ||| || || ||
Sbjct 1096 CCAGGAGAGGTTTTGTTTTCCATTGCGATTGCTATAGCTGGGCTTCTTCTT-TTCGCGCT 1154
Query 1260 TCTCATCGGGAATATGCAAACTTATCTGCAGTCACTTACGGTTCGTTTAGAGGAAATGAG 1319
|||||||||||||||||| |||||||| ||||||||||| |||||| | |||||||||||
Sbjct 1155 TCTCATCGGGAATATGCAGACTTATCTTCAGTCACTTACTGTTCGTCTCGAGGAAATGAG 1214
Query 1320 GATTAAAAGACGCGATTCCGAACAGTGGATGCATCACAGGTCACTTCCACAAAACCTGAG 1379
||| |||||||| || || ||||||||||||||||||||||||||||||||||| ||||
Sbjct 1215 GATCAAAAGACGTGACTCAGAACAGTGGATGCATCACAGGTCACTTCCACAAAATTTGAG 1274
Query 1380 GGAACGAGTCAGACGTTATGATCAATACAAATGGTTAGAAACAAGAGGAGTCGACGAAGA 1439
|||| |||||||||| ||||||||||||||||||||||| |||||||| || ||||||||
Sbjct 1275 GGAAAGAGTCAGACGCTATGATCAATACAAATGGTTAGAGACAAGAGGTGTAGACGAAGA 1334
Query 1440 AAACATAGTCCAGAGTTTACCAAAAGATCTTAGAAGAGACATCAAACGCCATCTCTGTCT 1499
||||||||| ||||||||||| || ||||| |||||||||||||||||||||||||||||
Sbjct 1335 AAACATAGTTCAGAGTTTACCTAAGGATCTCAGAAGAGACATCAAACGCCATCTCTGTCT 1394
Query 1500 GAACTTAGTTCGCAGGGTTCCTCTGTTTGCTAATATGGATGAGAGACTACTAGACGCAAT 1559
||| |||||| | ||||||||||||||||||||||||||||| ||| |||| ||||||||
Sbjct 1395 GAATTTAGTTAGGAGGGTTCCTCTGTTTGCTAATATGGATGAAAGATTACTTGACGCAAT 1454
Query 1560 ATGTGAGAGACTAAAGCCAAGTCTATACACAGAGAGCACTTACATAGTGCGAGAAGGAGA 1619
||||||||| ||||||| ||||| | ||| || ||||||||||| ||||| ||||||||
Sbjct 1455 CTGTGAGAGATTAAAGCCGAGTCTTTTCACGGAAAGCACTTACATTGTGCGTGAAGGAGA 1514
Query 1620 CCCGGTTAACGAAATGCTGTTCATAATCCGAGGCCGGTTAGAGAGTGTAACGACAGATGG 1679
||| |||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 1515 CCCCGTTAACGAAATGATGTTCATAATCCGAGGCCGGTTAGAAAGTGTAACAACAGATGG 1574
Query 1680 TGGAAGAAGTGGTTTCTTTAACAGAGGTTTATTGAAAGAAGGCGACTTTTGTGGTGAAGA 1739
|||||||| |||||||| |||||||| || || |||||||| |||||||||||||||||
Sbjct 1575 GGGAAGAAGCGGTTTCTTCAACAGAGGGTTGTTAAAAGAAGGAGACTTTTGTGGTGAAGA 1634
Query 1740 GCTTCTGACTTGGGCACTTGACCCTAAAGCAGGCTCAAACTTGCCTTCTTCCACAAGAAC 1799
||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1635 GCTTCTGACATGGGCTCTTGACCCTAAAGCAGGCTCAAACTTACCTTCTTCCACAAGAAC 1694
Query 1800 AGTGAAGGCTCTAACTGAAGTAGAGGCTTTCGCT-TTAGAAGCTGAAGAGCTCAAATTTG 1858
|||||||||||| ||||||||||||||||||||| || |||||||||||||| || ||||
Sbjct 1695 AGTGAAGGCTCTGACTGAAGTAGAGGCTTTCGCTCTT-GAAGCTGAAGAGCTGAAGTTTG 1753
Query 1859 TGGCTAGTCAGTTCAGGCGTCTTCACAGTCGTCAAGTCCAACAAACGTTCAGGTTTTACT 1918
| || |||||||| ||| | ||||| ||||| || || |||||||| || ||||||||||
Sbjct 1754 TAGCAAGTCAGTTTAGGAGACTTCATAGTCGACAGGTTCAACAAACATTTAGGTTTTACT 1813
Query 1919 CTCAACAATGGAGGACTTGGGCTGCTTGTTTTATCCAAGCCGCTTGGCGTAGAC-ACTT- 1976
|||| |||||||| ||||||||| |||| || |||||||| ||||||||| | | | ||
Sbjct 1814 CTCAGCAATGGAGAACTTGGGCTTCTTGCTTCATCCAAGCTGCTTGGCGTCG-CTA-TTC 1871
Query 1977 AAGAAGGAAAATCGCAGAGCTT-AGACGTA---aagaagaagaagaagaaATGGATTATG 2032
||||||||||| ||| || || ||||| | ||||| ||||||||||| ||| |||||
Sbjct 1872 AAGAAGGAAAAACGCTGAA-TTGAGACGGATTGAAGAAAAAGAAGAAGAATTGGGTTATG 1930
Query 2033 AAGATGATTACGA-GTATGATGA-TAATATG-GGTGGTGTGGTTA-CA-AGGA-GTGATA 2086
||||||| || || | |||| || | | | | || | |||||| || | || ||||
Sbjct 1931 AAGATGAATATGATG-ATGA-GAGTGACAAGAGGCC-TATGGTTATCACAAGAAGTGA-- 1985
Query 2087 GTTCTGCTGGATCAAGTTCTAGATTACGTTCCACGGTATTTGCATCAAGATTTGCTGCTA 2146
|| || | | ||||||| | ||||| ||| ||||||||||||||||||||||||
Sbjct 1986 GT-CT--T----C---TTCTAGACTGCGTTCAACGATATTTGCATCAAGATTTGCTGCTA 2035
Query 2147 ACGCGCTT-AA-GGGTCATA-AGCTAAGG-GTCTCCGAGAGTTCAAAGAGTTTGGTGAAT 2202
| || || || ||| || | | || ||| | ||| ||||||||||||| ||| | |||
Sbjct 2036 ATGCA-TTGAAAGGG-CACAGA-CTTAGGAG-CTCAGAGAGTTCAAAGACCTTGATAAAT 2091
Query 2203 CTA-AGAAAGCCATCAG-AACCTGATTTCGAGGCT 2235
|| | |||||| || | |||||||||| || |||
Sbjct 2092 CTGCA-AAAGCC-TCCGGAACCTGATTTTGATGCT 2124
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 112097816985
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5