BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg335330 Length=1611 Score E Sequences producing significant alignments: (Bits) Value AT1G20860.1 | Symbols: PHT1;8 | phosphate transporter 1;8 | chr... 2446 0.0 AT1G76430.1 | Symbols: PHT1;9 | phosphate transporter 1;9 | chr... 878 0.0 > AT1G20860.1 | Symbols: PHT1;8 | phosphate transporter 1;8 | chr1:7254007-7258677 REVERSE LENGTH=1605 Length=1605 Score = 2446 bits (1324), Expect = 0.0 Identities = 1516/1608 (94%), Gaps = 15/1608 (1%) Strand=Plus/Plus Query 1 ATGCCGATAAAGGTATTGTCGTCGCTTGATGCAGCTCGAATACAATGGTACCATTTCAAA 60 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct 1 ATGCCGATAAAGGTATTGTCGTCGCTTGATGTAGCTCGAACACAATGGTACCATTTCAAA 60 Query 61 GCGATCATAGTAGCAGGAATGGGTCTATTCACTGACGCATACGATCTTTTCTGCATCGCA 120 |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct 61 GCGATCATAGTAGCGGGAATGGGTCTATTCACCGACGCATACGATCTTTTCTGCATAGCA 120 Query 121 CCGGTCTTGAAAATGATTAGCCATGTTTATTACAACGGTGACTCAATCAACACGGCGGTT 180 |||||| ||||||||||||| |||||||||||||||||||||||||||||||| || ||| Sbjct 121 CCGGTCATGAAAATGATTAGTCATGTTTATTACAACGGTGACTCAATCAACACAGCCGTT 180 Query 181 CTTTCGACTTCTTACGCCATCGCTCTACTCGGCACAGCCACGGGTCAACTCCTCTTCGGT 240 ||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||| Sbjct 181 CTTTCAACTTCTTACGCCATCGCTTTACTCGGCACAGCCACGGGTCAACTAGTCTTCGGT 240 Query 241 TACCTCGGTGACCGAGTCGGTCGTCGCCGAGTCTACGGACTTTGTTTGATTATTATGATC 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 TACCTCGGTGACCGAGTCGGTCGTCGCCGAGTCTACGGACTTTGTTTGATTATTATGATC 300 Query 301 CTTAGCTCTTTTGGCTGTGGCTTTTCCGTGTGCACCACTCGTCGGTCTTGTGTTATGGTT 360 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 CTTAGCTCCTTTGGTTGTGGCTTTTCCGTGTGCACCACTCGTCGGTCTTGTGTTATGGTT 360 Query 361 AGCCTCGGTTTTTTCCGGTT-TATTCTTGGTTTGGGTATCGGTGGTGATTACCCGCTTTC 419 |||||||||||||||||||| | |||||||||| ||||||||||||||||||||||| || Sbjct 361 AGCCTCGGTTTTTTCCGGTTCT-TTCTTGGTTTAGGTATCGGTGGTGATTACCCGCTCTC 419 Query 420 GGCTACCATTATGTCAGAGTTTGCTAATAAGAAGACACGTGGCGCGTTTATTGCTGCGGT 479 ||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||| Sbjct 420 GGCTACCATTATGTCGGAGTTTGCTAATAAGAGGACACGTGGCGCGTTTATCGCTGCGGT 479 Query 480 GTTCTCCATGCAAGGGTTGGGGATTTTGGTTAGCTCTGCCGTGACCATGGCTGTTTGCGT 539 ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 480 GTTTTCGATGCAAGGGTTGGGGATTTTGGTTAGCTCTGCCGTGACCATGGCTGTTTGCGT 539 Query 540 GGCGTTTAAGAGCGGTGGTGGTGGTTTGGAGGTGGATGCGGCGGCTCCGACAGAAGCCGA 599 |||||||||||| |||| |||||||||||||||||||||||||||||||| ||||| || Sbjct 540 GGCGTTTAAGAGAAGTGGCGGTGGTTTGGAGGTGGATGCGGCGGCTCCGACGGAAGCTGA 599 Query 600 CGTGGCGTGGAGACTTATACTTATGATCGGTGCTCTTCCTGCTGCATTGACATTCTATTG 659 | |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 600 CTTGGCCTGGAGACTTATACTTATGATCGGTGCTCTTCCTGCTGCATTGACGTTCTATTG 659 Query 660 GCGAATGCTGATGCCTGAAACCGCAAGATACACAGCACTTGTGGAAAACAATATCGTCCA 719 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 660 GCGAATGTTGATGCCTGAAACCGCAAGATACACAGCACTTGTAGAAAACAATATCGTCCA 719 Query 720 AGCAGCAAAAGACATGCAAAGAGTCATGTCAATATCTCATATCTCCGACGAAGCCACGAC 779 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 720 AGCAGCAAAAGACATGCAAAGAGTCATGTCAAGATCTCATATCTCCGACGAAGCCACGAC 779 Query 780 GGAGCCAcctcctcctcctcctccGCCCCCTTCCTACAAACTCTTCTCCCGCTGCTTCTT 839 ||| |||||||||||||| || ||| |||||||||||||||||||||||||||||||| Sbjct 780 GGATCCACCTCCTCCTCCGCC---GCCACCTTCCTACAAACTCTTCTCCCGCTGCTTCTT 836 Query 840 CCGTCTCCATGGCCGCGACCTCTTCGCCGCCTCCTTTAATTGGTTCTTAATAGACATTGT 899 ||| |||||||| |||||||||||||| |||||||||||||||||| || |||||||||| Sbjct 837 CCGCCTCCATGGTCGCGACCTCTTCGCAGCCTCCTTTAATTGGTTCCTAGTAGACATTGT 896 Query 900 CTTCTACACAAGCAACCTCCTCCTCTCCCATATCTTCAGTCACTACTCCAACAAACCTTC 959 |||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||| Sbjct 897 CTTCTACACAAGCAACCTCCTCCTGTCCCATATCTTCAGTCATTACTCCAAGAAACCTTC 956 Query 960 TTCCTCCACCGCAGAAAACGTCTATGATGCAGCCTTCGAAGTGGCGGAATTAGGAGCCAT 1019 | || |||||||||||||| || |||||||| ||||||||||||||||||||||| Sbjct 957 --C----ACTGCAGAAAACGTCTACGACGCAGCCTTTGAAGTGGCGGAATTAGGAGCCAT 1010 Query 1020 CATTGCCGCTTGCTCAACCATTCCCGGTTATTGGTTCACAGTTTACTTCATCGACAAGAT 1079 ||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1011 CATCGCTGCTTGCTCCACCATTCCCGGTTATTGGTTCACAGTTTACTTCATCGACAAGAT 1070 Query 1080 AGGTCGTGTCAAAATCCA-AGTTATGGGGTTTTTCTTCATGGCCGTTATTTATTTAGTTG 1138 |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| | Sbjct 1071 AGGTCGTGTCAAAATCCAGA-TTATGGGGTTTTTCTTCATGGCCGTTATTTATTTAGTCG 1129 Query 1139 CTGGGATTCCGTACAGTTGGTATTGGTCAAAGCACGAGCAGAATAATAAAGGCTTTATGG 1198 |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct 1130 CTGGTATTCCGTACAGTTGGTATTGGTCAAAGCACGAGCATAATAATAAAGGCTTCATGG 1189 Query 1199 TTCTCTACGGTTTGATTTTCTTCTTTTGCAACTTTGGTCCCAACACTACAACTTTTATTA 1258 |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1190 TTCTCTACGGTTTGGTTTTCTTCTTTTGCAATTTTGGTCCCAACACTACAACTTTTATTA 1249 Query 1259 TTCCCGCAGAGCTTTTTCCGGCTAGGTTTAGGTCTACTTGCCACGGGATCTCTGGCGCCG 1318 |||||||||||| ||| ||||||||||||||||||||||| |||||||||||||| |||| Sbjct 1250 TTCCCGCAGAGCATTTCCCGGCTAGGTTTAGGTCTACTTGTCACGGGATCTCTGGTGCCG 1309 Query 1319 CTGGTAAGCTTGGGGCTATTGTGGGCACTGTTGGGTTCTTGTGGGCTACCAAGAAGATGG 1378 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1310 CGGGTAAGCTTGGGGCTATTGTGGGCACTGTTGGGTTCTTGTGGGCTACCAAGAAGATGG 1369 Query 1379 AAGGCGATGATAAAAACCAGGTTTATACCGAAGTGAACCGTATGAGAGTTGCTTTCTTGA 1438 || ||||||||||||||||| ||||| ||||||| |||||||||||| |||||||||||| Sbjct 1370 AAAGCGATGATAAAAACCAGATTTATCCCGAAGTAAACCGTATGAGAATTGCTTTCTTGA 1429 Query 1439 TTCTTGGTGGCGTTTGTATTGCCGGAATCTTTGTGACGTATTTCTTCACTAAGGAAACTA 1498 |||||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||||| Sbjct 1430 TTCTTGGTGGCGTTTGCATTGCTGGAATCTTGGTGACGTATTTCTTCACCAAGGAAACTA 1489 Query 1499 TGGGAAGATCGTTAGAGGAGAACGAGCATGAACAAGATAACAATGATGAGATC-GAAGTT 1557 ||||||||||||||||||||||||||||||| ||||||||||||| |||| || |||| | Sbjct 1490 TGGGAAGATCGTTAGAGGAGAACGAGCATGACCAAGATAACAATGCTGAG-TCTGAAGAT 1548 Query 1558 GAGCCACAGATTGTTGACGGGCAATCCTCGGCCAGCACTTTGCTTCAG 1605 ||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct 1549 GAGCCACAGATTGTTGACGGGCAATCCTCCGTGAGCACTTTGCTTCAG 1596 > AT1G76430.1 | Symbols: PHT1;9 | phosphate transporter 1;9 | chr1:28678935-28681995 REVERSE LENGTH=1900 Length=1900 Score = 878 bits (475), Expect = 0.0 Identities = 1218/1564 (78%), Gaps = 102/1564 (7%) Strand=Plus/Plus Query 14 TATTGTCGTCGCTT-GATGCAGCTCGAATACAATGGTACCATTTCAAAGCGATCATAGTA 72 |||| ||| || || || ||||| | ||||| |||||||||||||||||||| ||||| Sbjct 138 TATTATCGGCG-TTAGACGCAGCGAGGATACAGTGGTACCATTTCAAAGCGATAATAGTC 196 Query 73 GCAGGAATGGGTCTATTCACTGACGCATACGATCTTTTCTGCATCGCACCGGTCTTGAAA 132 || |||||||| || ||||| |||||||||||||||||||| || || ||| || ||||| Sbjct 197 GCCGGAATGGGACTTTTCACCGACGCATACGATCTTTTCTGTATAGCTCCGATCATGAAA 256 Query 133 ATGATTAGCCATGTTTATTACAACGGTGACTCAATC--AACACGGCGGTTCTTTCGACTT 190 ||||| || || | |||||| || ||||||||| ||| | || |||| || |||| Sbjct 257 ATGATAAGTCAAATATATTACCACAAAGACTCAATCGGAAC-C-GCTCTTCTCTCAACTT 314 Query 191 CTTACGCCATCGCTCTACTCGGCACAGCCACGGGTCAACTCCTCTTCGGTTACCTCGGTG 250 ||||||| |||||||| || ||||| || ||||| ||| |||| |||||| | |||| Sbjct 315 CTTACGCAATCGCTCTTCTTGGCACCGCGTTAGGTCAGCTCATCTTTGGTTACTTAGGTG 374 Query 251 ACCGAGTCGGTCGTCGCCGAGTCTACGGACTTTGTTTGATT-ATTATGATCCTTAGCTCT 309 |||||||||| ||||| |||||| |||||| || | || || ||| | ||||||| Sbjct 375 ACCGAGTCGGACGTCGTAAAGTCTATGGACTTAGTCT-CTTGATCATGGTGTTTAGCTCC 433 Query 310 TTTGGCTGTGGCTTTTCCGTGTGCACCACTCGTCGGTCTTGTGTTATGGTTAGCCTCGG- 368 ||||| |||||||| || || ||||| ||||| || ||||||||||||||||| || || Sbjct 434 TTTGGTTGTGGCTTCTCTGTTTGCACGACTCGACGTTCTTGTGTTATGGTTAGTCTTGGA 493 Query 369 TTTTTTCCGGTTTATTCTTGG-TTTGGGTATCGGTGGTGATTACCCGCTTTCGGCTACCA 427 || ||| | || ||||||| || || |||||||| ||||| || |||||||| || | Sbjct 494 TTCTTT-AGATTCGTTCTTGGACTT-GGAATCGGTGGAGATTATCCTCTTTCGGCCACGA 551 Query 428 TTATGTCAGAGTTTGCTAATAAGAA-GACACGTGGCGCGTTTATTGCTGCGGTGTTCTCC 486 ||||||| ||||||||||| || || ||| ||||| || ||||| ||||| |||||||| Sbjct 552 TTATGTCGGAGTTTGCTAACAA-AAGGACGCGTGGAGCTTTTATCGCTGCCGTGTTCTCG 610 Query 487 ATGCAAGGGTTGGGGATTTTGGTTAGCTCTGCCGTGACCATGGCTGTTTGCGTGGCGTTT 546 ||||||||||| ||||||||| | |||||||| ||||| |||| ||| ||| ||||||| Sbjct 611 ATGCAAGGGTTAGGGATTTTGATGAGCTCTGCTGTGACTATGGTTGTGTGCTTGGCGTTC 670 Query 547 AAGAGCGGT-G-GTGGTG-GTTTGGAG--G-TGGA--T-GC-------G-G-C---GGCT 585 |||| || | | | || | ||| |||| | | | | || | | | |||| Sbjct 671 AAGAACGCTGGAGAGGGGAGTTCGGAGAAGACGAACGTGGCGGGGTTAGAGACTTTGGCT 730 Query 586 CCGACAGAAGCCGACGTGGCGTGGAGACTT-ATACTTATGATCGGTGCTCTTCCTGCTGC 644 ||| | ||| | || | |||||||| || || ||||||||||| |||||||| || || Sbjct 731 CCGCCGGAATCGGATATAGCGTGGAG-GTTGATTCTTATGATCGGAGCTCTTCCCGCCGC 789 Query 645 ATTGACATTCTATTGGCGAATGCTGATGCCTGAAACCGCAAGATACACAGCACTT-GTGG 703 || || || || ||||||||||| |||||||||||||| |||||||||||| || || | Sbjct 790 GTTAACGTTTTACTGGCGAATGCTCATGCCTGAAACCGCCAGATACACAGCA-TTGGTTG 848 Query 704 AAAACAATATCGTCCAAGCAGCAAAAGACATGCAAAGAGTCATGTCAATATC--TCATAT 761 | |||||| | ||||||||||||||||||||||||||||||||||| |||| | |||| Sbjct 849 AGAACAATGTAGTCCAAGCAGCAAAAGACATGCAAAGAGTCATGTCCGTATCAATGATAT 908 Query 762 CTCCGA---C-GAAGC--CA-CGA-CGGAGCCAcctcctcctcc-tcctccGCCCCCTTC 812 ||| | | |||| || | | |||||| | | || || || || || | | Sbjct 909 CTCAAATAACCGAAGATTCATC-ATCGGAGCTAGAACAACCACCGTCTTCTTCC---T-C 963 Query 813 CTACAAACTCTTCTCCCGCTGCTTCTTCCGTCTCCATGGCCGCGACCTCTTCGCCGCCTC 872 |||||||||||||| ||| | ||| || ||||||| || || ||||||||||| ||||| Sbjct 964 ATACAAACTCTTCTCTCGCCGTTTCCTCAGTCTCCACGGTCGAGACCTCTTCGCAGCCTC 1023 Query 873 CTTTAATTGGTTCTTAATAGACATTGTCTTCTACACAAGCAACCTCCTCCTCTCCCATAT 932 ||||||||| || | ||| | |||||||| |||||||| ||||| ||||| || || Sbjct 1024 AGCCAATTGGTTCCTAGTGGACGTCGTCTTCTATACAAGCAATCTCCTTCTCTCTCAAAT 1083 Query 933 CTTCAGTCACTACTCCAACAAACCTTCTTCCTCCAC-CGCAGAAAACGTCTATGA-TGCA 990 ||| | ||| |||||||||||| | | || || | || ||| |||||| || | | Sbjct 1084 CTTTA---ACTTCTCCAACAAACC--C--C-TCAACTC-CACAAA-CGTCTACGACT-CT 1132 Query 991 GCCTTCGAAGTGGCGGAA--TTAGGAGCCATCATTGCCGCTTGCTCAACCATTCCC-GGT 1047 ||||| ||||| || || || | |||||| | ||||||||||| ||||| ||| ||| Sbjct 1133 GCCTTTGAAGTAGCT-AAGCTT-GCAGCCATTGTAGCCGCTTGCTCCACCAT-CCCTGGT 1189 Query 1048 TATTGGTTCACAGTTTACTTCATCGACAAGATAGGTCGTGTCAAAATCCAAGTT-ATGGG 1106 || |||||||| || || |||||||| || || ||| | ||||| || || | | ||||| Sbjct 1190 TACTGGTTCACGGTCTATTTCATCGATAAAATCGGTAGAGTCAAGATTCA-GATGATGGG 1248 Query 1107 GTTTTTC-TTCATGGCCGTTATTTATTTAGTTGCTGGGATTCCGTACAGTTGGTATTGGT 1165 ||||||| || ||||| || |||| ||||| |||||||||||||| ||||||||||||| Sbjct 1249 GTTTTTCCTT-ATGGCGGTCGTTTACTTAGTCGCTGGGATTCCGTATAGTTGGTATTGGT 1307 Query 1166 CAAAGCACGAGCAGAATAATAAAGGCTTTATGGTTCTCTACGGTTTGATTTTCTTCTTTT 1225 | ||||| ||| ||| ||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1308 CTAAGCATGAGAAGACTAATAAAGGCTTTATGGTTCTCTACGGATTGATTTTCTTCTTTA 1367 Query 1226 GCAACTTTGGTCCC-AACACTACAACTTTTATTATTCCCG-CAGAGCTTTTTCCGGCTAG 1283 |||||||||| ||| ||||| || || ||||| || |||| | ||||||||||||||||| Sbjct 1368 GCAACTTTGG-CCCTAACACGACGACGTTTATCAT-CCCGGCGGAGCTTTTTCCGGCTAG 1425 Query 1284 GTTTAGGTCTACTTGCCACGGGATCTCTGGCGCCGCTGGTAAGCTTGGGGCTATTGTGGG 1343 ||||||||| || || |||||||| ||||| || || || ||| |||| || ||||| || Sbjct 1426 GTTTAGGTCCACGTGTCACGGGATATCTGGAGCTGCAGGGAAGTTTGGTGCGATTGTTGG 1485 Query 1344 CACTGTTGGGTTCTTGTGGGCTACCAAGAAGATGGAAGGCGATGATAAAA-ACCAGGTTT 1402 |||||| || ||||||||||| || || || | | |||| | | || ||||| Sbjct 1486 CACTGTCGGTTTCTTGTGGGCCAC---GA-GAC--AC--C-ATGA-AGAGGAC--GGTTT 1533 Query 1403 ATACC-GAAGTGAACCGTATGAGAGTTGC-TTTCTTGATTCTTGGTGGCGTTTGTATTGC 1460 | || || ||||| ||| ||||| | || ||| ||||| ||||| ||||||||||| || Sbjct 1534 -T-CCAGATGTGAAACGTGTGAGAATCGCGTTT-TTGATCCTTGGCGGCGTTTGTATCGC 1590 Query 1461 CGGAATCTTTGTGACGTATTTCTTCACTAAG-GAAACTATGGGAAGATCGTTAGAGGAGA 1519 ||||| | || |||||||| ||||| | ||||||||||||||||||||||| |||| Sbjct 1591 GGGAATGATCGTAACGTATTTGTTCACGC-GTGAAACTATGGGAAGATCGTTAGAAGAGA 1649 Query 1520 ACGA 1523 |||| Sbjct 1650 ACGA 1653 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 79567863825 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5