BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg335563
Length=1470
Score E
Sequences producing significant alignments: (Bits) Value
AT1G23210.1 | Symbols: AtGH9B6, GH9B6 | glycosyl hydrolase 9B6 ... 2335 0.0
AT1G70710.1 | Symbols: ATGH9B1, CEL1, GH9B1 | glycosyl hydrolas... 1212 0.0
> AT1G23210.1 | Symbols: AtGH9B6, GH9B6 | glycosyl hydrolase 9B6
| chr1:8240174-8242129 FORWARD LENGTH=1470
Length=1470
Score = 2335 bits (1264), Expect = 0.0
Identities = 1401/1468 (95%), Gaps = 6/1468 (0%)
Strand=Plus/Plus
Query 1 ATGGCGGGAAACTCCCTAATCG-CTCCGGCGATTATGCTCGCGTTGCTTCTCCTTATTTC 59
||||||||||| ||| | || | ||||||||||||||||||| ||||||||||||||||
Sbjct 1 ATGGCGGGAAAATCCTTTAT-GACTCCGGCGATTATGCTCGCCATGCTTCTCCTTATTTC 59
Query 60 ACCGGAGATC-TACGCCGGTCATGACTACCGCGACGCTCTCCGCAAGAGCATCCTTTTCT 118
|||||||| | ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 60 ACCGGAGA-CTTACGCCGGTCACGACTACCGCGACGCTCTCCGCAAGAGCATCCTCTTCT 118
Query 119 TCGAAGGTCAACGCTCCGGTAAGCTTCCACCAGATCAACGCCTTAAATGGCGCCGTGACT 178
||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||
Sbjct 119 TCGAAGGTCAACGCTCCGGCAAACTTCCACCAGATCAACGCCTTAAGTGGCGCCGTGACT 178
Query 179 CCGCCTTACGCGACGGTTCCTCCGCCGGCGTGGATTTAACGGGAGGCTACTACGACGCTG 238
||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct 179 CCGCCTTACGCGACGGTTCTTCCGCCGGCGTGGATTTAACGGGAGGGTACTACGACGCTG 238
Query 239 GAGATAACGTAAAATTCGGATTTCCGATGGCGTTCACGACGACAATGATGTCATGGAGCG 298
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 239 GAGACAACGTAAAATTCGGATTCCCGATGGCGTTCACGACGACAATGATGTCATGGAGCG 298
Query 299 TCATAGATTTCGGTAAAACAATGGGACCGGAGCTTGAAAACGCCGTGAAAGCTATCAAAT 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 299 TCATAGATTTCGGTAAAACAATGGGACCGGAGCTTGAAAACGCCGTGAAAGCTATCAAAT 358
Query 359 GGGGAACAGATTATCTCATGAAAGCGACTCAGATTCCCGGCGTCGTCTTTGTCCAAGTCG 418
||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 359 GGGGAACGGATTATCTCATGAAAGCGACTCAGATTCCCGACGTCGTCTTTGTCCAAGTCG 418
Query 419 GAGACGCTTACTCCGACCACAATTGTTGGGAACGTCCCGAGGACATGGACACGCTTCGAA 478
|||||||||||||||| || |||||||||||||| ||||||||||||||||| || ||||
Sbjct 419 GAGACGCTTACTCCGATCATAATTGTTGGGAACGCCCCGAGGACATGGACACACTACGAA 478
Query 479 CGGTTTATAAAATCGATAAAGACCATCCTGGTTCCAAAGTCGCCGGAGAAACCGCAGCCG 538
| |||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||
Sbjct 479 CCGTTTATAAAATCGATAAAGACCATTCTGGTTCTGAAGTCGCCGGAGAAACCGCCGCCG 538
Query 539 CACTAGCCGCCGCATCGATCGTGTTTGAAAAACGCGATCCGA-TATACTCCAAAATGCTC 597
||||||| |||||||| ||||||||||||||||||||||| | |||||||||||||||||
Sbjct 539 CACTAGCAGCCGCATCAATCGTGTTTGAAAAACGCGATCC-AGTATACTCCAAAATGCTC 597
Query 598 CTCGACCGAGCAACAAGGGTGTTTGCGTTCGCCCAAAAGTACCGAGGAGCGTACAGTGAT 657
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 598 CTGGACCGAGCAACAAGGGTGTTTGCGTTCGCCCAAAAGTACCGAGGAGCGTACAGTGAT 657
Query 658 AGTCTTTACCAAGTAGTGTGTCCTTTTTACTGCGATTTCAACGGTTATGAGGATGAGTTG 717
|||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 658 AGTCTTTATCAAGCAGTGTGTCCTTTTTACTGCGATTTCAACGGTTACGAGGATGAGTTG 717
Query 718 CTTTGGGGAGCGGCTTGGCTACACAAAGCGTCGAAGAAACGAGTGTATAGAGAGTTCATT 777
|| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 718 CTATGGGGAGCGGCTTGGCTACATAAAGCGTCGAAGAAACGAGTGTATAGAGAGTTCATT 777
Query 778 GTGAAGAACCAAGTTATTCTAAGAGCTGGAGATACGATCCACGAGTTTGGTTGGGATAAT 837
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 778 GTGAAGAACCAAGTTATTCTAAGAGCTGGAGATACGATCCACGAATTTGGTTGGGATAAT 837
Query 838 AAACATGCTGGGATTAATGTCTTAATCTCCAAAATGGTACTAATGGGAAAAGCAGATTAT 897
|||||||| ||||||||||||||| |||||||||||||| | |||||||||||||| |||
Sbjct 838 AAACATGCCGGGATTAATGTCTTAGTCTCCAAAATGGTATTGATGGGAAAAGCAGAGTAT 897
Query 898 TTTCAGAGTTTTAAGCAAAACGCTGATGAGTTTATCTGTTCTTTATTGCCTGGAATTTCT 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 898 TTTCAGAGTTTTAAGCAAAACGCTGATGAGTTTATCTGTTCTTTATTGCCTGGAATTTCT 957
Query 958 CACCCTCAAGTCCAATACTCACAAGGAGGATTATTAGTGAAGAGTGGAGGAAGTAATATG 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 958 CACCCTCAAGTCCAATACTCACAAGGAGGATTATTAGTGAAGAGTGGAGGAAGTAATATG 1017
Query 1018 CAGCATGTAACATCTTTGTCGTTTTTGTTACTAACATACTCTAATTACCTAAGTCACGCC 1077
|| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 1018 CAACATGTAACATCTTTGTCTTTTTTGTTACTAACATACTCTAATTACCTAAGCCACGCA 1077
Query 1078 AATAAGGTGGTGCCATGTGGCGAATTCATAGCTTCTCCTACTCTTCTCCGTCAAGTCGCC 1137
|||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||
Sbjct 1078 AATAAGGTGGTGCCATGTGGCGAATTTACAGCTTCTCCTGCTCTTCTCCGTCAAGTCGCC 1137
Query 1138 AAGCGTCAGGTGGACTACTTACTAGGAGATAATCCGATGAAAATGTCGTACATGGTTGGG 1197
|||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct 1138 AAGCGTCAGGTGGACTACATACTAGGAGATAATCCAATGAAAATGTCGTACATGGTTGGG 1197
Query 1198 TATGGTTCGAGGTTTCCGCAGATGATTCACCATCGTGGCAGCTCGGTTCCTTCAGTCGTG 1257
||||||||||||||||| |||| |||||| |||||||||||||||||||||||||| |||
Sbjct 1198 TATGGTTCGAGGTTTCCACAGAAGATTCATCATCGTGGCAGCTCGGTTCCTTCAGTTGTG 1257
Query 1258 GACCATCCTGGTCGTATAGGGTGCAAAGACGGTTCTCGTTACTTCCTCAGCAATAATCCT 1317
|||||||||| ||||||||||||||||||||| |||||||| ||| ||||||||||||||
Sbjct 1258 GACCATCCTGATCGTATAGGGTGCAAAGACGGATCTCGTTATTTCTTCAGCAATAATCCT 1317
Query 1318 AATCCTAATTTGCTAATTGGCGCCGTCGTTGGTGGGCCTAATATCACTGACGATTTTCCT 1377
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1318 AATCCTAATTTGCTAATTGGCGCCGTCGTTGGTGGGCCTAATATCACCGACGATTTTCCT 1377
Query 1378 GATTCGAGACCTTACTTTCAGCTGACTGAGCCCACGACTTATATCAACGCACCTCTTTTG 1437
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1378 GATTCGAGACCTTACTTTCAGCTGACTGAGCCCACTACTTATATCAACGCACCTCTTTTG 1437
Query 1438 GGCCTTCTTGGTTACTTCTCGGCCCATT 1465
||||| |||||||| |||||||||||||
Sbjct 1438 GGCCTACTTGGTTATTTCTCGGCCCATT 1465
> AT1G70710.1 | Symbols: ATGH9B1, CEL1, GH9B1 | glycosyl hydrolase
9B1 | chr1:26659132-26663010 REVERSE LENGTH=1751
Length=1751
Score = 1212 bits (656), Expect = 0.0
Identities = 1223/1493 (82%), Gaps = 54/1493 (4%)
Strand=Plus/Plus
Query 1 ATGGCGGGAAACTCCCTAA-TCGCTCCGGCGATTATGCTCG-CGTTGCTTCTCCTTAT-T 57
|||||| |||| ||||||| | | |||| |||| |||||| |||| ||||| ||| | |
Sbjct 49 ATGGCGCGAAAATCCCTAATTTTC-CCGGTGATTTTGCTCGCCGTT-CTTCT-CTTCTCT 105
Query 58 TCACCGGAGAT-CTACGCCGGTCATGACTACCGCGACGCTCTCCGCAAGAGCATCCTTTT 116
| || || | || ||||||||| || ||||||||||||||||| || ||||| || ||
Sbjct 106 CCGCC-GATTTACTCCGCCGGTCACGATTACCGCGACGCTCTCCGTAAAAGCATTCTCTT 164
Query 117 CTTCGAAGGTCAACGCTCCGGTAAGCTTCCACCAGATCAACGCCTT-AAATGGCGCCGTG 175
||||||||||||||| |||||||| || || ||||||||||| ||| |||||||||||||
Sbjct 165 CTTCGAAGGTCAACGTTCCGGTAAACTCCCTCCAGATCAACG-CTTAAAATGGCGCCGTG 223
Query 176 ACTCCGCCTTACGCGACGGTTCCTCCGCCGGCGTGGATTTAACGGGAGGCTACTACGACG 235
|||| || |||||||||||||||||||||||||| || ||| | || || ||||||||||
Sbjct 224 ACTCAGCATTACGCGACGGTTCCTCCGCCGGCGTTGACTTATCCGGTGGTTACTACGACG 283
Query 236 CTGGAGATAACGTAAAATTCGGATTTCCGATGGCGTTCACGACGACAATGATGTCATGGA 295
| ||||| ||| | || ||||| ||||||||||||||||| || || ||| | |||||||
Sbjct 284 CCGGAGACAACATCAAGTTCGGTTTTCCGATGGCGTTCACAACAACGATGCTTTCATGGA 343
Query 296 GCGTCATAGATTTCGGTAAAACAATGGGACCGGAGCTTGA-AAACGCCGTGAAAGCTATC 354
| | || |||||||||||||| |||||||| |||||| | |||||||||||||||| |
Sbjct 344 GTATAATCGATTTCGGTAAAACCATGGGACCTGAGCTT-AGAAACGCCGTGAAAGCTGTT 402
Query 355 AAATGGGGAACAGATTATCTCATGAAAGCGAC-TCAGATTCCCGGCGTCGTCTTTGTCCA 413
||||||||||||||||| ||| | |||||||| | ||||||||| || ||||| |||||
Sbjct 403 AAATGGGGAACAGATTACCTCCTTAAAGCGACGGC-GATTCCCGGAGTAGTCTTCGTCCA 461
Query 414 AGTCGGAGACGCTTACTCCGACCACAATTGTTGGGAACGTCCCGAGGACATGGACACGCT 473
||||||||||||||||||||| || || ||||||||| | || || || |||||||| ||
Sbjct 462 AGTCGGAGACGCTTACTCCGATCATAACTGTTGGGAAAGGCCTGAAGATATGGACACTCT 521
Query 474 TCGAACGGTTTATAAAATCGATAAAGAC-CATCCTGGTTCCAAAGTCGCCGGAGAAACCG 532
|| || ||||| |||||||||| || | ||||||||||| | ||||| || |||||||
Sbjct 522 CCGTACTGTTTACAAAATCGATAGAG-CTCATCCTGGTTCTGACGTCGCTGGTGAAACCG 580
Query 533 CAGCCGCACTAGCCGCCGCATCGATCGTGTTTGA-AAAACGCGATCC-GATATACTCCAA 590
||||||| |||||||||| || ||||| ||| | |||||||||||| | | || ||||
Sbjct 581 CAGCCGCTTTAGCCGCCGCTTCAATCGT-TTTTAGAAAACGCGATCCTGCT-TATTCCAG 638
Query 591 AATGCTCCTCGACCGAGCAACAAGGGTGTTTGCGTTCGCCCAAAAG-TACCGAGGAGCGT 649
| | || || ||||| || || ||||| || ||||| | | || || || || || ||||
Sbjct 639 ACTTCTACTTGACCGTGCCACTAGGGTATTCGCGTTTG-CTAACAGATATCGCGGCGCGT 697
Query 650 ACAGTGATAGTCTTTACCAAGTAGTGTGTCCTTTTTACTGCGATTTCAACGGTTATGAGG 709
| ||| | ||||| ||||| | || |||||||||||||| |||||||||||||| |||
Sbjct 698 ATAGTAACAGTCTCTACCACGCGGTTTGTCCTTTTTACTGTGATTTCAACGGTTACCAGG 757
Query 710 ATGAGTTGCTTTGGGGAGCGGCTTGGCTACACAAAGCGTCGAAGAAACGAGTGTATAGAG 769
||||||| || ||||||||||| |||||||||||||| |||| |||||||| ||| ||||
Sbjct 758 ATGAGTTACTGTGGGGAGCGGCATGGCTACACAAAGCCTCGAGGAAACGAGCGTACAGAG 817
Query 770 AGTTCATTGTGAAGAACCAAGTTATTC-TAAGAGCTGGAGATACGATCCACGAGTTTGGT 828
| ||||||||||||||| | || |||| |||| ||||||||||| || | |||||||||
Sbjct 818 AATTCATTGTGAAGAACGAGGTCATTCTTAAG-GCTGGAGATACCATTAATGAGTTTGGT 876
Query 829 TGGGATAATAAACATGCTGGGATTAATGTCTTAATCTCCAA--AA-TGGTACTAATGGGA 885
||||| ||||| ||||||||||||||||||||||||||||| || || | ||||||||
Sbjct 877 TGGGACAATAAGCATGCTGGGATTAATGTCTTAATCTCCAAGGAAGTG-T--TAATGGGA 933
Query 886 AAAGCAGATTATTTTCAGAGT-TTT-AAGCAAAACGCTGATGAGTTTATCTGTTCTTTAT 943
|||||||| |||||| |||| ||| ||||| ||||| |||| ||||||||||||| |||
Sbjct 934 AAAGCAGAGTATTTT--GAGTCTTTCAAGCAGAACGCAGATGGGTTTATCTGTTCTATAT 991
Query 944 TGCCTGGAATTTCTCACCCTCAAGTCCAATACTCACAAGGAGGATTATTAGTGAAGAGTG 1003
||||||||||||||||||| |||||||||||||| | |||||| || ||||||||| ||
Sbjct 992 TGCCTGGAATTTCTCACCCCCAAGTCCAATACTCTCGAGGAGGGCTACTAGTGAAGACTG 1051
Query 1004 GAGGAAGTAATATGCAGCATGTAACATCTTTGTCGTTTT-TGTTACTAACATACTCTAAT 1062
|||| ||||| ||||| ||||||||||| | || ||| | || | | |||||||||
Sbjct 1052 GAGGGAGTAACATGCAACATGTAACATCACTATC-TTTCCTCCTATTGGCTTACTCTAAT 1110
Query 1063 TACCTAAGTCACGCCAATAAGGTGGTGCCATGTGGCGAATTCA-TAGCTTCTCC-TACTC 1120
|| || || || ||||| ||||| ||||| ||||||||||| | | ||||| || | |||
Sbjct 1111 TATCTGAGCCATGCCAAAAAGGTTGTGCCTTGTGGCGAATTAACT-GCTTCCCCAT-CTC 1168
Query 1121 TTCTCCGTCAAGTCGCCAAGCGTCAGGTGGACTAC-TTACTAGGAGATAATCCGATGAAA 1179
| ||||||||| ||||||||||||||||||| ||| || || ||||| || |||||| |
Sbjct 1169 TCCTCCGTCAAATCGCCAAGCGTCAGGTGGATTACATT-CTCGGAGACAACCCGATGGGA 1227
Query 1180 ATGTCGTACATGGTTGGGTATGGTTCGAG-GTTTCCGCAG-ATGATTCACCATCGTGGCA 1237
|||| ||||||||||| || ||| | | |||||| | | | |||||| || ||||| |
Sbjct 1228 CTGTCTTACATGGTTGGATACGGT-CAAAAGTTTCCAC-GTAGGATTCATCACCGTGGTA 1285
Query 1238 GCTCGGTTCCTTCAGTCGTG-GACCATCCTGGTCGTATAGGGTGCAAAGACGGTTCTCGT 1296
||||||||||||| || | | |||||| | | |||||||||||||| || |||||
Sbjct 1286 GCTCGGTTCCTTCGGTT-TCAGCCCATCCAAGCCACATAGGGTGCAAAGAAGGCTCTCGC 1344
Query 1297 TACTTCCTCAGCA-ATAATCCTAATCCTAA--TTTGCTAATTGGCGCCGTCGTTGGTGGG 1353
|| ||||| ||| | |||||||| || || ||| | |||| || || || |||||
Sbjct 1345 TATTTCCTAAGCCCA-AATCCTAACCCAAACCTTT--TGGTTGGTGCTGTAGTCGGTGGA 1401
Query 1354 CCTAATATCACTGACGATTTTCCTGATTCGAGACCTTACTTTCAGCTGACTGAGCCCACG 1413
|||||| ||||||| | |||||| ||||| |||||||||||||||| | |||||||||||
Sbjct 1402 CCTAATGTCACTGATGCTTTTCCGGATTCAAGACCTTACTTTCAGCAGTCTGAGCCCACG 1461
Query 1414 ACTTATATCAACGCACCTCTTTTGGGCCTTCTTGGTTACTTCTCGGCCCATTC 1466
||||||||||| ||||| || |||||||||| ||||||||||| ||||||||
Sbjct 1462 ACTTATATCAATGCACCACTAGTGGGCCTTCTCGGTTACTTCTCCGCCCATTC 1514
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 72489586980
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5