BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg335602 Length=795 Score E Sequences producing significant alignments: (Bits) Value AT1G23640.1 | Symbols: | unknown protein; LOCATED IN: chloropl... 1238 0.0 AT1G23660.1 | Symbols: | Domain of unknown function DUF220 | c... 832 0.0 AT2G27670.1 | Symbols: | Domain of unknown function DUF220 | c... 468 4e-131 AT1G23690.1 | Symbols: | Domain of unknown function DUF220 | c... 462 2e-129 AT1G23600.1 | Symbols: | Domain of unknown function DUF220 | c... 335 4e-91 AT1G23620.1 | Symbols: | pseudogene, hypothetical protein | ch... 80.5 2e-14 > AT1G23640.1 | Symbols: | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF220 (InterPro:IPR003863); BEST Arabidopsis thaliana protein match is: Domain of unknown function DUF220 (TAIR:AT1G23660.1); Has 270 Blast hits to 130 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 270; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:8367170-8370280 REVERSE LENGTH=1275 Length=1275 Score = 1238 bits (670), Expect = 0.0 Identities = 744/780 (95%), Gaps = 4/780 (1%) Strand=Plus/Plus Query 18 ATTTAGTGGATCGATCAATCCTCATGTTGAAGAGCCGCATGAGGTCGAGTCCAAGAACCC 77 ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct 498 ATTTAGTGGGTCGATCAATCCTCATGTTGAAGAGCCTCATGAGGTCGAGTCCAAGAGCCC 557 Query 78 CGCATCTAATTCTGTGTGGGCGGTAGACCCTAAATATTATGACTTAGCTGAGGTAAAGAA 137 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 558 TGCATCTAATTCTGTGTGGGCGGTAGATCCTAAATATTATGACTTAGCTGAGGTAAAGAA 617 Query 138 GGAATCAAAACTTTGGAGAGCTGCAGAGAAGAAGCATCCATGGTATGATGCACCAGCTAA 197 |||||||| ||||||||||||||| ||||| || ||||||||||||||||| |||||||| Sbjct 618 GGAATCAAGACTTTGGAGAGCTGCTGAGAAAAAACATCCATGGTATGATGCTCCAGCTAA 677 Query 198 GGTGAAGGTGACAACaaaaaaaG-GTCTTTGCCATTTGAACATAGAATTCAAATTGGGAT 256 ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct 678 GGTGAAGGTGACAAC-AAAAAAGTGTCTTTGCCATTTGAACATAGAATTCAAATTGGGAT 736 Query 257 TGCCTCCTGAAGCAGTCTACGAGATGTTCACTAATCCAAACAACTTTCCTTTCTTCAAAG 316 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 737 TGCCTCCTGAAGCAGTCTATGAGATGTTCACTAATCCAAACAACTTTCCTTTCTTCAAAG 796 Query 317 AGGACAAGGACGGGCGCCAACGTTTGGAAAACAAATCAACAAAGGTTTTGAAGAAGGATG 376 |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 797 AGGATAAGGCCGGGCGCCAACGTTTGGAAAACAAATCAACAAAGGTTTTGAAGAAGGATG 856 Query 377 GACCGAGGCAGACCACAGAGGTGGAAAAAGCTTTGTCCTGGAACTTTCTTGGGTGTTCTG 436 |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct 857 GACCAAGGCAGACCACGGAGGTGGAAAAAGCTTTGTCCTGGAACTTTCTTGGGTGTTCAG 916 Query 437 GAGATATCCCAATACATCTTATAATCCACGAAAACCATAAGAATCTAACTGCAAAATATA 496 |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct 917 TAGATATCCCAATACATCTTATAATTCACGAAAACCATAAGAATCTAACAGCAAAATATA 976 Query 497 CGACAAAGAAAATGATTTTAATGAAAGTGTTCGAGGGTAGCTGGAAAGTTGAGCCAGACT 556 |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| | Sbjct 977 CGACAAAGAAAATGATGTTAATGAAAGTGTTCAAGGGTAGCTGGAAAGTTGAGCCAGATT 1036 Query 557 ACGTAGATCAGGAACGCTTGTGCAAGCCAAGGTTGCCAAAAAGTCGAAAAGAATACAAAA 616 |||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||| Sbjct 1037 ACGTAGATCAGGAACGCTTGTGCAAGTCAAGGTCGCCAAAAAGTCGAGAAGAATACAAAA 1096 Query 617 TATGTAGCGGTGGACAAGGAAAAGTTGGGTCGAAAGTTTCAATGGAGCAGATTTTTCAGC 676 ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||| Sbjct 1097 TATGTAGCGGTGGACAAGGAAAAGTTGGGTCAAAAGTTACAATGGAGCAGATTTTTGAGC 1156 Query 677 CTTCTTCTCTTCTTAATCTACCACCGGTTTCATGGATCATTTGTGGGATCACCATCAGAA 736 |||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| Sbjct 1157 CTTCTTCTCTTCTTAATCGACCACCGGTTTCTTGGATCATTCGTGGGATCACCATCAGAA 1216 Query 737 CCACCAAGATTCTGCTCGAAGATCTTAGAAAAGCGGGTACCTCTTTACG-GAAAGTTTGA 795 ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||| Sbjct 1217 CCACCAAGATTCTGCTCGAAGATCTTAGAAAAGCGGGTACCACTTTACGAGAA-GTTTGA 1275 Score = 134 bits (72), Expect = 2e-30 Identities = 180/230 (78%), Gaps = 15/230 (7%) Strand=Plus/Plus Query 348 CAAATCAACAAAGGTTTTGAAGAAGGATGGACCGAGGCAGACCACAGAGGTGGAA-AAAG 406 |||||||| |||||||||||||||||||||||||||||||| ||| | ||| |||| Sbjct 234 CAAATCAAGAAAGGTTTTGAAGAAGGATGGACCGAGGCAGATTGT-GAGATTGAAGAAAG 292 Query 407 CTTTGTCCTGGAACTTTCT-TGGGTGTTCTGGAGA-TATCCCAATACATCTTATAATCCA 464 || || | ||| ||||||| ||| || |||||||| | ||| | || |||| || || | Sbjct 293 CTGTGGCATGGGACTTTCTATGG-TGGTCTGGAGAATTTCCGA-TAAATCTAATTGTCGA 350 Query 465 CGAAAACCATAA-GAATCTAACTGCAAAATATACGACAA-AGAAAATGATTTTAATGAAA 522 | |||| | || || ||| || |||||||||| | || |||||||||| || |||||| Sbjct 351 TGTAAACAAAAAAGA-TCTTACAGCAAAATATAAAA-AAGAGAAAATGATGTTCATGAAA 408 Query 523 GTGTTCGAGGGTAGCTGGAAAGTT-GAGCCAG-ACTACGTAGAT-CAGGA 569 || ||||| |||| |||||| | | |||||| | || |||||| ||||| Sbjct 409 GTTTTCGAAGGTAACTGGAA-GATAGAGCCACTA-TATGTAGATTCAGGA 456 Score = 89.8 bits (48), Expect = 4e-17 Identities = 56/60 (93%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 146 AACTTTGGAGAGCTGCAGAGAAGAAGCATCCATGGTATGATGCACCAGCTAAGGTGAAGG 205 |||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 170 AACTATGGAAAGCTGCAGAGAAGAAGCATCCATGGTATGATGCACCTCCTAAGGTGAAGG 229 > AT1G23660.1 | Symbols: | Domain of unknown function DUF220 | chr1:8371609-8372845 REVERSE LENGTH=868 Length=868 Score = 832 bits (450), Expect = 0.0 Identities = 690/805 (86%), Gaps = 20/805 (2%) Strand=Plus/Plus Query 1 ATGAGTGTAATTCCTAGATTTAGTGGATCGATCAATCCTCATGTTGAAGAGCCGCATGAG 60 |||||||| ||||| ||||| || | | |||||||| ||||||||||||| | |||| Sbjct 74 ATGAGTGTGCTTCCTGGATTTGGTAGCTGGATCAATCAGAATGTTGAAGAGCCTCCTGAG 133 Query 61 GTCGAGTCCAAGAA-CCCCGCATCT-AATTCTGTGTGGGCGGTAGACCCTAAATATTATG 118 | ||||||||| || ||| |||| || |||||||||||||||| |||||||||| | Sbjct 134 GCCGAGTCCAA-AAGCCCTAAATCTGAA-GCTGTGTGGGCGGTAGATACTAAATATTACG 191 Query 119 ACTTAGCTGAGGTAAAGAAG-GAATCA-AAACTTTGGAGAGCTGCAGA-GAAGAAGCATC 175 |||||| ||| || || || ||| | ||| |||||||||||||||| ||| ||||||| Sbjct 192 ACTTAGATGAAGT-GAGGAGAGAAGGAGAAA-TTTGGAGAGCTGCAGAGGAA-AAGCATC 248 Query 176 CATGGTATGATGCACCAGCTAAGGTGAAGGTGACAACaaaaaaaGGTCTTTGCCATTTGA 235 ||||||||||||| || |||||||||||||||||||||||||| |||||||||||| ||| Sbjct 249 CATGGTATGATGCTCCTGCTAAGGTGAAGGTGACAACAAAAAATGGTCTTTGCCATATGA 308 Query 236 ACATAGAATTCAAATTGGGATTGCCTCCTGAAGCAGTCTACGAGATGTTCACTAATCCAA 295 |||||||||| ||| ||||||| |||||||||| |||||||||||||||||||||||||| Sbjct 309 ACATAGAATTTAAACTGGGATTACCTCCTGAAGGAGTCTACGAGATGTTCACTAATCCAA 368 Query 296 ACAACTTTCCTTTCTTCAAAGAGGACAAGGACGGGCGCCAACGTTTGGAAAACAAATCAA 355 |||||| ||| |||||||| ||||||||| ||||||||||||| ||||||||||||||| Sbjct 369 ACAACTATCCAGTCTTCAAAAAGGACAAGGCCGGGCGCCAACGTCTGGAAAACAAATCAA 428 Query 356 CAAAGGTTTTGAAGAAGGATGGACCGAGGCAGACCACAGAGGTGGAAAAAGCTTTGTCCT 415 ||| ||||||||||| ||||||||||||||||||| ||| ||||||||| ||||| || Sbjct 429 GAAAAGTTTTGAAGAAAAATGGACCGAGGCAGACCACGGAGATGGAAAAAGATTTGTACT 488 Query 416 GGAACTTTCTTGGG-TGTTCTGGAG-ATATCCCAATACATCTTA-TAATCCACGAAAACC 472 ||||||| ||| | | | | || | ||||| |||||||| | | ||| | ||||| | Sbjct 489 GGAACTTCCTTTTCATATCCAG-AGCA-ATCCCGATACATCT-AGTTATCGATGAAAATC 545 Query 473 ATAAGAATCTAACTGCAAAATATACGACAAAGAAAATGAT-TTTAATGAAAGTGTTCGAG 531 |||||||||| || |||||||||| ||||||||| ||||| ||| |||||||||| ||| Sbjct 546 ATAAGAATCTCACAGCAAAATATAGGACAAAGAATATGATGTTTT-TGAAAGTGTTGGAG 604 Query 532 GGTAGCTGGAAAGTTGAGCCAGACTACGTAGATCAGGAACGCTTGTGCAAGCCAAGGTTG 591 |||||||||||||| | |||||||| |||||||||||||||||||||||| |||||||| Sbjct 605 GGTAGCTGGAAAGTGGTGCCAGACTTTGTAGATCAGGAACGCTTGTGCAAGTCAAGGTTG 664 Query 592 CCAAAAAGTCGAAAAGAATACAAAATATGTAGCGGTGGACAAGGAAAAGTTGGGTCGAAA 651 || ||||||||| |||||||||||| |||||| |||||||||||||| |||||||| || Sbjct 665 CCGAAAAGTCGAGAAGAATACAAAAGATGTAGTGGTGGACAAGGAAAGGTTGGGTCCAAG 724 Query 652 GTTTCAATGGAGCAGATTTTTCAGCCTTCTTCTCTTCTTAATCTACCACCGGTTTCATGG 711 || | ||||||||||| ||| |||||||| ||||||||||||| ||||||||||| ||| Sbjct 725 GTGACCATGGAGCAGATCTTTAAGCCTTCTCCTCTTCTTAATCTGCCACCGGTTTCTTGG 784 Query 712 ATCATTTGTGGGATCACCATCAGAACCACCAAGATTCTGCTCGAAGATCTTAGAAAAGCG 771 || || ||||||| ||||||| ||||||||||||||||||||||||| || ||||||| Sbjct 785 ATAATCCGTGGGATTACCATCAAAACCACCAAGATTCTGCTCGAAGATATTCGAAAAGCA 844 Query 772 GGTACCTCTTTACGGAA-AGTTTGA 795 |||||| ||||||| || ||||||| Sbjct 845 GGTACCACTTTACG-AACAGTTTGA 868 > AT2G27670.1 | Symbols: | Domain of unknown function DUF220 | chr2:11801568-11802891 REVERSE LENGTH=882 Length=882 Score = 468 bits (253), Expect = 4e-131 Identities = 498/613 (81%), Gaps = 29/613 (5%) Strand=Plus/Plus Query 169 AAGCATCCATGGTATGATGCACCAGCTAAGGTGAAGGTGACAACaaaaaaaGGTCTTTGC 228 |||||||||||||||||||| || |||| ||||||||||| ||||||||| ||||||||| Sbjct 241 AAGCATCCATGGTATGATGCTCCTGCTACGGTGAAGGTGAAAACAAAAAAGGGTCTTTGC 300 Query 229 CATTTGAACATAGAATTCAAATTGGGATTGCCTCCTGAAGCAGTCTAC-GAGATG-TTCA 286 |||||||||||||||||| |||||||| ||||||| || ||||| | |||||| || | Sbjct 301 AATTTGAACATAGAATTCACATTGGGATGGCCTCCTCAATTAGTCT-CTGAGATGCTT-A 358 Query 287 CTAATCCAA-ACAACTTTCCTTTCTTCA-A--AGAGGACAAGGACGGGCGCCAACGTTTG 342 ||||||||| | ||| | |||||||| | | || | |||| |||||||||||| Sbjct 359 CTAATCCAAGA-AACATAAATTTCTTCAGATTATTCGATAGGGACTTTCGCCAACGTTTG 417 Query 343 GAAAACAAATCAACAAAGGTTTTGAAGAAGGATGGACCGAGGCAGACCAC-AGAGGTGGA 401 || ||||||||||||||||||||||||||||| |||||| |||||| ||| |||| || | Sbjct 418 GACAACAAATCAACAAAGGTTTTGAAGAAGGACGGACCGCGGCAGATCACGAGAG-TGAA 476 Query 402 AAAAGCTTTGTCCTGGAA-CTTTCTTGGGTGTTCTGGAGATATCCCAATACATCTTATAA 460 |||| ||||| | || || |||||| | ||| || |||||| |||||||| || | Sbjct 477 AAAAACTTTGAGATATAAGCTC-CTTGGGCGCTCTATAGCTATCCCGATACATCTAATCA 535 Query 461 TCCACGAAAACCATAAGAATCTAACTGCAAAATATACGACAA-AGAAAATGATTTTA-AT 518 || | ||||||||||| || ||||| |||||||||| || || |||||||||| | | || Sbjct 536 TCGATGAAAACCATAAAAACCTAACGGCAAAATATAAGA-AAGAGAAAATGATGT-ACAT 593 Query 519 GAAAGTGTTCGAGGGTAGCTGGAAAGTTGAGCCAG-ACTACGTAGATCAGGAACGCTTGT 577 ||||||||| |||||||| |||||||| |||||| | |||| ||||||||||||||| | Sbjct 594 GAAAGTGTTTGAGGGTAGATGGAAAGTGGAGCCACTA-TACGCAGATCAGGAACGCTTAT 652 Query 578 GCAAGCCAAGGTTGCCAAA-AAGTCGAA-AAGAATACAAAATATGTAGCGGTGGACAAGG 635 ||||| | |||| || | || | ||| |||| ||||||| |||||| | ||| |||| Sbjct 653 GCAAGTCTAGGTCGCGGATTAA-T-GAAGAAGAGTACAAAAAATGTAGTGACGGAAAAGG 710 Query 636 AAA-AGTTGGGTCGAAAGTTT-CAATGGAGCAGATTTTTCAGCCTTCTTCTCTTCTTAAT 693 || | |||| || |||| | ||||||||||||| |||||||||| ||||||||||||| Sbjct 711 AAGGA-TTGGATC-AAAGGTGACAATGGAGCAGATCTTTCAGCCTTGTTCTCTTCTTAAT 768 Query 694 CTACCACCGGTTTCATGGATCATTTGTGGGATCACCATCAGAACCACCAAGA-TTCTGCT 752 | |||||| |||| ||| |||| ||| ||||||||||| ||| | |||| || |||| Sbjct 769 GTGCCACCGATTTCTTGGTTCATCCGTGAGATCACCATCAAAACAATAAAGAATT-TGCT 827 Query 753 CGAAGATCTTAGA 765 ||||||||||||| Sbjct 828 CGAAGATCTTAGA 840 > AT1G23690.1 | Symbols: | Domain of unknown function DUF220 | chr1:8377262-8378769 REVERSE LENGTH=1128 Length=1128 Score = 462 bits (250), Expect = 2e-129 Identities = 528/659 (80%), Gaps = 31/659 (5%) Strand=Plus/Plus Query 112 TATTATGACTTAGCTGAGG-TAAAGAAGGAATCAAAACTTTGGAGAGCTGCAGAGAAGAA 170 ||||||||| |||||||| | |||||| || ||||||||||||||||||||||||||| Sbjct 271 TATTATGACAAAGCTGAGGCT-AAGAAGCAAGGAAAACTTTGGAGAGCTGCAGAGAAGAA 329 Query 171 GCATCCATGGTATGATGCACCAGCTAAGGTGAAGGTGACAACaaaaaaaGGTCTTTGCCA 230 | | |||||||||||||| || ||||||| ||||||||||||||||| ||||||||||| Sbjct 330 GAAACCATGGTATGATGCTCCTCCTAAGGTCAAGGTGACAACAAAAAAGGGTCTTTGCCA 389 Query 231 TTTGAACATAGAATTCAAATTGGGATTGCCTCCTGAAGCAGTCTACGAGATGTTCACTAA 290 || ||||||| || | | | ||||||||||| |||| ||||| || ||||| |||| Sbjct 390 CATGCACATAGAGTTGACAGTAGGATTGCCTCCGGAAGGGGTCTATGATTTGTTCGCTAA 449 Query 291 TCCAAACAACTTTCCTTTCTTCAAAGAG-GACAA-G-GAC-GGGCGCCAACGTTTGGAAA 346 ||| ||| ||||||| ||||||| || ||||| | ||| |||||| ||| |||||||| Sbjct 450 TCCGAACGACTTTCCATTCTTCAG-GATCGACAACGAGACTGGGCGCGAACTTTTGGAAA 508 Query 347 ACAAATCAACAAAGGTTTTGAAGAAGGATGGACCGAGGCAGACCACAGAGGT-GGAAAAA 405 ||||||||| ||||||||||| ||| |||||||||||||||| | | | ||| ||| ||| Sbjct 509 ACAAATCAAGAAAGGTTTTGATGAAAGATGGACCGAGGCAGAGCGC-GCGGTTGGAGAAA 567 Query 406 GCTTTGTCCTGGAACTTTCTTGGGTGTTCTGGAGATATCCCAAT-ACATCTTATAATCCA 464 ||| || ||||| || ||||| |||| | ||||| | | ||| | || ||| || | | Sbjct 568 GCTCTGACCTGGGACGTTCTTTGGTGGTGTGGAGCTTTTCCATTTAC-TCTAATTGTTGA 626 Query 465 CGAAAACCATAAGAA-TCTA-ACTGCAAAATATACGACAA-AGAAAATGAT-TTTAATGA 520 |||||||| || || | || | | || ||||| || || ||||||||| |||| ||| Sbjct 627 TGAAAACCAAAAAAACTTTAGAG-G-AAGATATATGA-AAGAGAAAATGAAGTTTA-TGA 682 Query 521 AAG-TGTTCGAGGGTAGCTGGAAAGTTGAGCCAG-ACTACGTAGAT-CAGGAACGCTTGT 577 || | || ||||||| |||||| | |||||| | ||||||||| ||| ||||||||| Sbjct 683 AATATTTT-GAGGGTAAATGGAAAATAGAGCCACTA-TACGTAGATTCAG-AACGCTTGT 739 Query 578 GCAAGC-CAAGGTTGCCAAAAAGTCGAAAAGAATACAAAATATGTAGCGGTGGACAAGGA 636 ||||| || | ||| || |||||| |||||||||||| ||||||||| ||| ||||| Sbjct 740 GCAAGGACA-GAAAGCCGAAGAGTCGAGAAGAATACAAAAGATGTAGCGGCGGAGAAGGA 798 Query 637 AAAGTTGGGTCGAAAGTTTCAATGGAGCAGATTTTTC-AGCCTTCTTCTCTTCTTAATCT 695 || |||| |||||||| ||||||| || || ||| | |||| || |||||||||||| Sbjct 799 AAGGTTGCATCGAAAGTGACAATGGACCA-ATACTTCCAACCTTATTTTCTTCTTAATCT 857 Query 696 ACCACCGGTTTCATGG-ATCATTTGTGGGATCACCATCAGAACCACCAAGATTCTGCTC 753 |||||| |||| ||| | |||| ||||||||||||||| ||||||||| | ||||||| Sbjct 858 ACCACCACTTTCTTGGTA-CATTCGTGGGATCACCATCAAAACCACCAAAAATCTGCTC 915 > AT1G23600.1 | Symbols: | Domain of unknown function DUF220 | chr1:8361004-8362485 REVERSE LENGTH=1134 Length=1134 Score = 335 bits (181), Expect = 4e-91 Identities = 489/632 (77%), Gaps = 44/632 (7%) Strand=Plus/Plus Query 144 AAAACTTTGGAGAGCTGCAGAGAAGAAGCATCCATGGTATGATGCACCAGCTAAGGTGAA 203 ||| |||||||| | |||||||||||||||||||||||||||| | || | || ||||| Sbjct 280 AAATCTTTGGAGTGATGCAGAGAAGAAGCATCCATGGTATGATCCCCCTCCAAAAGTGAA 339 Query 204 GGTGACAACaaaaaaaGGTCTTTGCCATTTGAACATAGAATTCAAATTGGGATTGCCTCC 263 |||||||| ||||| |||||||||||| ||||||||||||| | ||| ||| ||||||| Sbjct 340 GGTGACAATGAAAAAGGGTCTTTGCCATATGAACATAGAATTGACATTAGGAGTGCCTCC 399 Query 264 TGAAGCAGTC-TACGAGA-TGTTCA-CTAATCCAAACAACTTTCCTTTCTTCAA-AGAGG 319 ||| | || | ||||| | | |||| | ||||||| |||| | || ||||| | || Sbjct 400 TGATGGAG-CATACGA-ACTTTTCATC-AATCCAACCAACATACCATTCTTTGTTATAG- 455 Query 320 ACAAGG-ACGGGCGCCAACGTT-TGGAAAACAAATCAACAAAGGTTTTGAAGAAGGATGG 377 ||||| | ||||| |||| || ||| ||||||||||| |||| |||||||||| ||||| Sbjct 456 ACAAGTCA-GGGCGACAAC-TTCTGGCAAACAAATCAAGAAAGATTTTGAAGAAAGATGG 513 Query 378 ACCGAGGCAGACCACAGA-GGTGGAA-AAAGCTTTGTCCTGGAACTTTCTTGGGTGT-TC 434 ||| ||||||||| || |||| || |||||| || | ||| |||| ||| ||| | || Sbjct 514 ACCTAGGCAGACCGT-GAAGGTG-AAGAAAGCTGTGGCATGGGACTTCCTTTGGT-TCTC 570 Query 435 TGGAGATATCCCAAT-ACATCTTA-TAATCCACGAAAACCATAA-GAATCT--AACTGCA 489 |||| | |||| || | || ||| | || |||||||| | || || || || | | Sbjct 571 TGGATCTCTCCCCATTA-AT-TTAATTGTCAACGAAAACAAAAAAGAC-CTTGAAGT--A 625 Query 490 AAATATACGACA-AAGAAAATGATTTTAATGAAAGTGTTCGAGGGTAGCTGGAAAGTTGA 548 ||||||| || | || |||||||| || |||||||||||||| |||||||||||| | || Sbjct 626 AAATATAAGAAAGAA-AAAATGATGTTCATGAAAGTGTTCGAAGGTAGCTGGAAAATAGA 684 Query 549 GCCAG-ACTACGTAGAT-CAGGAACGCTTGTGCAAGC-CAAGGTTGCCAAAAAGTCGAAA 605 ||| | || |||||| ||| | ||||| |||||| || | || || |||||| | Sbjct 685 ACCACTA-TATGTAGATGCAG-ATCGCTTATGCAAGAACATGAAA-CCTAAGAGTCGAGA 741 Query 606 AGAATACAAAATATGTAGCGGTGGACAAGGAAAAGTTGGGTCGAAAGTTTCAATGGAGCA 665 ||||||||||| |||||| || |||||||||||| ||| | ||||| | ||||| || Sbjct 742 AGAATACAAAAAATGTAGTGGCGGACAAGGAAAAATTGCACCAAAAGTGACTATGGACCA 801 Query 666 GAT-TTTTCAGCCTTCTTCTCTTCTTAA-TCTACCACCGGTTTCATGG-ATCATTTGTGG 722 || ||||||||| | | ||||| |||| ||| || ||| |||| ||| || ||| || Sbjct 802 -ATATTTTCAGCCATATCCTCTT-TTAAATCTGCCGCCGTTTTCTTGGTAT-ATTCGTAA 858 Query 723 GATCACCATCA-GAACCACCAAGATTCTGCTC 753 |||||||||| || ||||||| | ||||||| Sbjct 859 CATCACCATCAAGA-CCACCAAAACTCTGCTC 889 > AT1G23620.1 | Symbols: | pseudogene, hypothetical protein | chr1:8364662-8366449 REVERSE LENGTH=1788 Length=1788 Score = 80.5 bits (43), Expect = 2e-14 Identities = 68/80 (85%), Gaps = 2/80 (3%) Strand=Plus/Plus Query 133 AAGAAGGAATCA-AAACTTTGGAGAGCTGCAGAGAAGAAGCATCCATGGTATGATGCACC 191 |||||| ||| | |||||||||| ||| |||||||||||||||||||||||||||| || Sbjct 303 AAGAAGCAAT-ATGAACTTTGGAGTGCTTCAGAGAAGAAGCATCCATGGTATGATGCCCC 361 Query 192 AGCTAAGGTGAAGGTGACAA 211 | ||||| ||||| |||| Sbjct 362 TCCGAAGGTCAAGGTAACAA 381 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 38680293190 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5