BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg336031 Length=780 Score E Sequences producing significant alignments: (Bits) Value AT1G29280.1 | Symbols: WRKY65, ATWRKY65 | WRKY DNA-binding prot... 1253 0.0 > AT1G29280.1 | Symbols: WRKY65, ATWRKY65 | WRKY DNA-binding protein 65 | chr1:10236367-10237467 FORWARD LENGTH=1002 Length=1002 Score = 1253 bits (678), Expect = 0.0 Identities = 746/780 (96%), Gaps = 0/780 (0%) Strand=Plus/Plus Query 1 ATGAAGCGAGGTCTAGAGATGGCGAGAAACTACAATGATCATGAAAGCAGTCAAGAAACC 60 ||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||| Sbjct 223 ATGAAGCGAGGTCTAGATATGGCGAGAAGCTACAATGATCATGAAAGTAGTCAAGAAACC 282 Query 61 GGACCCGAATCACCAAATTCTTCAACCTTCAACGACATGAAAGCTCTTATCTCTTCTCAT 120 ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| Sbjct 283 GGACCCGAATCACCAAATTCTTCAACCTTTAACGGCATGAAAGCTCTTATCTCTTCTCAT 342 Query 121 TCACCTAAAAGAAGCAGGAGATCCATAGAGAAGAGAGTAGTGAACGTACCGATGAAAGAA 180 || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 343 TCGCCTAAAAGAAGCAGGAGATCCGTAGAGAAGAGAGTAGTGAACGTACCGATGAAAGAA 402 Query 181 ATGGAAGGATCTCGGCACAAAGGTGACACAACTCCGCCGTCAGATTCATGGGCTTGGCGT 240 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct 403 ATGGAAGGATCTCGGCACAAAGGGGACACAACTCCGCCCTCAGATTCATGGGCTTGGCGT 462 Query 241 AAGTACGGCCAAAAGCCCATTAAGGGATCTCCTTACCCTAGAGGTTATTACCGTTGTAGT 300 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 463 AAGTACGGCCAAAAGCCCATTAAGGGATCTCCATACCCTAGAGGTTATTACCGTTGTAGT 522 Query 301 AGCACAAAAGGTTGTCCGGCGAGGAAGCAAGTCGAGAGAAGCAGAGATGATCCAACGATG 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 523 AGCACAAAAGGTTGTCCGGCGAGGAAGCAAGTCGAGAGAAGCAGAGATGATCCAACGATG 582 Query 361 ATCCTCATCACTTACACTTCTGAGCATAACCATCCTTGGCCTCTCACTTCTTCCACAAGA 420 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 583 ATTCTCATCACTTACACTTCTGAGCATAACCATCCTTGGCCTCTCACTTCTTCCACAAGA 642 Query 421 AACGGGCCTAAACCCAAACCCGAGCCCAAACCTGAACCCGAGCCTGAGGTAGAGCCAGAG 480 |||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct 643 AACGGGCCTAAACCTAAACCCGAGCCCAAACCCGAACCTGAGCCTGAGGTAGAGCCAGAG 702 Query 481 GCCGAGGAAGAGGATAACAAGTTTATGGTTCTTGGAAGGGAGATTGAAACAACGCCGTCT 540 || ||||| |||||||| |||||||||||||||||||||| ||||||||| ||||| || Sbjct 703 GCGGAGGAGGAGGATAATAAGTTTATGGTTCTTGGAAGGGGGATTGAAACGACGCCATCA 762 Query 541 TGCGTCGACGAGTTCGCGTGGTTTACGGAGATGGAGACAACATCTTCGACCATTCTTGAG 600 || |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct 763 TGTGTCGACGAGTTCGCATGGTTTACGGAGATGGAGACAACATCTTCGACGATTCTTGAG 822 Query 601 AGCCCGATTTTTTCGTCGGAGAAAAAGACGGCTGCCTCGGCGGCAGATGATGTGGCAGTG 660 ||||||||||| |||||||||||||||||||||| ||||| ||| ||||| ||||| ||| Sbjct 823 AGCCCGATTTTCTCGTCGGAGAAAAAGACGGCTGTCTCGGGGGCTGATGACGTGGCGGTG 882 Query 661 TTCTTTCCGCTGGGAGAGGAAGATGAGTCTTTGTTCGCCGATCTCGGCGAGTTGCCGGAG 720 ||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct 883 TTCTTTCCGATGGGAGAAGAGGATGAGTCTTTGTTCGCCGATCTCGGCGAGTTGCCGGAG 942 Query 721 TGTTCGGTGGTGTTTCGTCACCGGAGTAGCGTAGTGGGGTCACAAGTTGAGATCTTTTGA 780 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 943 TGTTCTGTGGTGTTTCGTCACCGGAGTAGCGTAGTGGGGTCACAAGTTGAGATCTTTTGA 1002 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 37926780985 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5