BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg336095 Length=660 Score E Sequences producing significant alignments: (Bits) Value AT1G29962.1 | Symbols: AGL64 | AGAMOUS-like 64 | chr1:10496730-... 719 0.0 AT1G28450.1 | Symbols: AGL58 | AGAMOUS-like 58 | chr1:10003966-... 625 2e-178 AT1G28460.1 | Symbols: AGL59 | AGAMOUS-like 59 | chr1:10006230-... 595 1e-169 AT1G54760.1 | Symbols: AGL85 | AGAMOUS-like 85 | chr1:20433912-... 579 1e-164 > AT1G29962.1 | Symbols: AGL64 | AGAMOUS-like 64 | chr1:10496730-10497287 FORWARD LENGTH=558 Length=558 Score = 719 bits (389), Expect = 0.0 Identities = 490/539 (91%), Gaps = 5/539 (1%) Strand=Plus/Plus Query 1 ATGAATCCCAAGAAAACCAAAGGAAAGCAAAAGATTACCATCAAGAAAATTGAAAAAGAC 60 ||||| |||||||||||||||||||| |||| ||||| |||||||||||||||||||||| Sbjct 1 ATGAAACCCAAGAAAACCAAAGGAAAACAAAGGATTAACATCAAGAAAATTGAAAAAGAC 60 Query 61 GAAGACAGATTGGTCACATTGTCTAAGCGTCGAAATGGTATCTACACTAAGCTCAGCGAG 120 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 61 GAAGACAGATTGGTCACATTGTCTAAGCGTCGAAATGGTATCTACACTAAACTCAGTGAG 120 Query 121 CTTTCCATTCTCTGCGGCGCTGAAGTTGCGTTTCTCGGGTACTCTTGCTCCGGAAAGCCT 180 |||||||||||||| || ||||||||||||||||||||||| |||||||| ||||| || Sbjct 121 CTTTCCATTCTCTGTGGTGCTGAAGTTGCGTTTCTCGGGTATTCTTGCTCTGGAAAACCA 180 Query 181 TACACATTCGGCAGCCCATCCTTCCAAGCCGTGGCAGAGCGGTTTCTCAACGGCGAGTCC 240 |||||||||||||| || ||||||||||||||||||||||||||||||||||||||| || Sbjct 181 TACACATTCGGCAGTCCGTCCTTCCAAGCCGTGGCAGAGCGGTTTCTCAACGGCGAGGCC 240 Query 241 TCCTCGTCTTCTTCATC---GTTGCAACGATCGGTCATGAATGCTCACCAGCAAGCGAAG 297 || |||||||||||||| ||||||||||||||||||||||||||| |||||||||||| Sbjct 241 TCGTCGTCTTCTTCATCATCGTTGCAACGATCGGTCATGAATGCTCATCAGCAAGCGAAG 300 Query 298 ATTCAAGAGCTTTGCAAAGTATACAACAGAATGGTGGAGAAGGCAAAGGCGGAAGAAGTC 357 |||||||||||||||||||||||||| ||| |||||||| || || || |||||||||| Sbjct 301 ATTCAAGAGCTTTGCAAAGTATACAATAGATTGGTGGAGGAGATAACGGTGGAAGAAGTC 360 Query 358 AAAGTAAAGAAGGCGGCTGCATTGGCGGAGAAGATGCCCTTGAATGAGGATGCGTGGTGG 417 ||| |||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct 361 AAATTAAAGAAGACGGCTGCATTGGCGGAGATGATGCCCATGAATGAGGATGCGTGGTGG 420 Query 418 AAAGTGGATCCAAAGGAGGTGAAGGATCATGAAGAGGCGAAGAAGAT-ACTGGAAAAGTG 476 |||||||||||||| || |||||||||| ||||||| ||||||||| | |||| ||| Sbjct 421 AAAGTGGATCCAAATGACGTGAAGGATCGCGAAGAGGTGAAGAAGATGA-TGGAGAAGCA 479 Query 477 TGAAGGGCTCTATGAGAAACTGTGTGACGAAGCTGCTGCAAGGATCCAGAGGGGAGATG 535 | ||| |||||||||||||||||| || ||||||||| |||||||| |||| ||| ||| Sbjct 480 TCAAGAGCTCTATGAGAAACTGTGCGAGGAAGCTGCTTCAAGGATCAAGAGAGGACATG 538 > AT1G28450.1 | Symbols: AGL58 | AGAMOUS-like 58 | chr1:10003966-10004523 FORWARD LENGTH=558 Length=558 Score = 625 bits (338), Expect = 2e-178 Identities = 474/540 (88%), Gaps = 7/540 (1%) Strand=Plus/Plus Query 1 ATGAATCCCAAGAAAACCAAAGGAAAGCAAAAGATTACCATCAAGAAAATTGAAAAAGAC 60 |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| Sbjct 1 ATGAATCCCAAGAAAACCAAAGGAAAACAAAAGATTAACATCAAGAAAATTGAAAAAGAC 60 Query 61 GAAGACAGATTGGTCACATTGTCTAAGCGTCGAAATGGTATCTACACTAAGCTCAGCGAG 120 |||||||||| |||||||||||||||||||| ||||| ||||||||||| | ||| ||| Sbjct 61 GAAGACAGATCGGTCACATTGTCTAAGCGTCTAAATGCTATCTACACTATGATCATTGAG 120 Query 121 CTTTCCATTCTCTGCGGCGCTGAAGTTGCGTTTCTCGGGTACTCTTGCTCCGGAAAGCCT 180 |||||||||||||| || | ||||||||||||| ||||||| |||||||| ||||| || Sbjct 121 CTTTCCATTCTCTGTGGTGTTGAAGTTGCGTTTATCGGGTATTCTTGCTCTGGAAAACCA 180 Query 181 TACACATTCGGCAGCCCATCCTTCCAAGCCGTGGCAGAGCGGTTTCTCAACGGCGAGTCC 240 |||||||||||||| || |||||||||||||||| ||||||||||||||||||||| || Sbjct 181 TACACATTCGGCAGTCCGTCCTTCCAAGCCGTGGTGGAGCGGTTTCTCAACGGCGAGGCC 240 Query 241 TCCTCGTCTTCTTCATC---GTTGCAACGATCGGTCATGAATGCTCACCAGCAAGCGAAG 297 || |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||| Sbjct 241 TCGTCGTCTTCTTCATCATCGTTGCAACGATCGGTCAAGAATGCTCACAAGCAAGCGAAG 300 Query 298 ATTCAAGAGCTTTGCAAA-GTATACAACAGAATGGTGGAGAAGGCAAAGGCGGAAGAAGT 356 |||||||||||||||||| | |||||| ||| |||||||| || ||||| ||| ||||| Sbjct 301 ATTCAAGAGCTTTGCAAAAG-ATACAATAGATTGGTGGAGGAGTTAAAGGTGGACGAAGT 359 Query 357 CAAAGTAAAGAAGGCGGCTGCATTGGCGGAGAAGATGCCCTTGAATGAGGATGCGTGGTG 416 |||||| |||||||| |||||||||||||||| || | || ||||| ||||||||||||| Sbjct 360 CAAAGTCAAGAAGGCAGCTGCATTGGCGGAGACGAGGGCCGTGAATAAGGATGCGTGGTG 419 Query 417 GAAAGTGGATCCAAAGGAGGTGAAGGATCATGAAGAGGCGAAGAAGAT-ACTGGAAAAGT 475 ||||| |||||||| || ||||||||||| ||| ||||||||||||| | |||| |||| Sbjct 420 GAAAGCAGATCCAAATGACGTGAAGGATCACGAAAAGGCGAAGAAGATGA-TGGAGAAGT 478 Query 476 GTGAAGGGCTCTATGAGAAACTGTGTGACGAAGCTGCTGCAAGGATCCAGAGGGGAGATG 535 | ||| |||| | ||||||||| |||| |||| |||| ||||||| |||| ||| ||| Sbjct 479 ATCAAGAGCTCAAAGAGAAACTGCGTGAGGAAGTTGCTTTAAGGATCAAGAGAGGACATG 538 > AT1G28460.1 | Symbols: AGL59 | AGAMOUS-like 59 | chr1:10006230-10006778 FORWARD LENGTH=549 Length=549 Score = 595 bits (322), Expect = 1e-169 Identities = 468/538 (87%), Gaps = 12/538 (2%) Strand=Plus/Plus Query 1 ATGAATCCCAAGAAAACCAAAGGAAAGCAAAAGATTACCATCAAGAAAATTGAAAAAGAC 60 |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct 1 ATGAATCCCAAGAAAACCAAAGGAAAACAAAAGATTAACATCAAGAAAATTGAAAAAGAT 60 Query 61 GAAGACAGATTGGTCACATTGTCTAAGCGTCGAAATGGTATCTACACTAAGCTCAGCGAG 120 |||| ||||| ||||||||| |||||||||| |||||||||||||||||| |||| ||| Sbjct 61 GAAGGCAGATCGGTCACATTCTCTAAGCGTCTAAATGGTATCTACACTAAAATCAGTGAG 120 Query 121 CTTTCCATTCTCTGCGGCGCTGAAGTTGCGTTTCTCGGGTACTCTTGCTCCGGAAAGCCT 180 ||||| |||||||| || | ||||||||||||| ||||||| |||||||| ||||| || Sbjct 121 CTTTCTATTCTCTGTGGTGTTGAAGTTGCGTTTATCGGGTATTCTTGCTCTGGAAAACCA 180 Query 181 TACACATTCGGCAGCCCATCCTTCCAAGCCGTGGCAGAGCGGTTTCTCAACGGCGAGT-C 239 ||||| || ||||| |||||||||||||||||||| |||||||||||||||||||| | | Sbjct 181 TACACTTTTGGCAGTCCATCCTTCCAAGCCGTGGCGGAGCGGTTTCTCAACGGCGA-TGC 239 Query 240 CTCCTCGTCTTCTTCATCGTTGCAACGATCGGTCATGAATGCTCACCAGCAAGCGAAGAT 299 ||| |||||||||||| | || | || |||||||||||||||| ||||||||||||| Sbjct 240 CTCGTCGTCTTCTTCA----T-CATC-ATTGGTCATGAATGCTCACAAGCAAGCGAAGAT 293 Query 300 TCAAGAGCTTTGCAAAGTATACAACAGAATGGTGGAGAAGGCAAAGGCGGAAGAAGTCAA 359 |||||||||||||||| |||||| ||| |||||||| || ||||| ||| |||||||| Sbjct 294 TCAAGAGCTTTGCAAAAAATACAATAGATTGGTGGAGGAGTTAAAGGTGGACGAAGTCAA 353 Query 360 AGTAAAGAAGGCGGCTGCATTGGCGGAGAAGATGCCCTTGAATGAGGATGCGTGGTGGAA 419 ||| |||||||| |||||||||||||||| || | | ||||| |||||| ||||||||| Sbjct 354 AGTCAAGAAGGCAGCTGCATTGGCGGAGACGAGGGTCGTGAATAAGGATGTGTGGTGGAA 413 Query 420 AGTGGATCCAAAGGAGGTGAAGGATCATGAAGAGGCGAAGAAGAT-ACTGGAAAAGTGTG 478 |||||||||||| || ||||||||||| ||| ||||||||||||| | |||| |||| | Sbjct 414 AGTGGATCCAAATGACGTGAAGGATCACGAAAAGGCGAAGAAGATGA-TGGAGAAGTATC 472 Query 479 AAGGGCTCTATGAGAAACTGTGTGA-CGAAGCTGCTGCAAGGATCCAGAGGGGAGATG 535 ||| ||||||||| ||||||||||| | |||||||| |||||||| |||| ||| ||| Sbjct 473 AAGAGCTCTATGATAAACTGTGTGAGC-AAGCTGCTTCAAGGATCAAGAGAGGACATG 529 > AT1G54760.1 | Symbols: AGL85 | AGAMOUS-like 85 | chr1:20433912-20434397 FORWARD LENGTH=486 Length=486 Score = 579 bits (313), Expect = 1e-164 Identities = 427/479 (89%), Gaps = 19/479 (4%) Strand=Plus/Plus Query 61 GAAGACAGATTGGTCACATTGTCTAAGCGTCGAAATGGTATCTACACTAAGCTCAGCGAG 120 |||||||||||||||||||| ||||||||||||||||| ||||||| |||| || ||| Sbjct 3 GAAGACAGATTGGTCACATTATCTAAGCGTCGAAATGGAATCTACAATAAG--CAATGAG 60 Query 121 CTTTCCATTCTCTGCGGCGCTGAAGTTGCGTTTCTCGGGTACTCTTGCTCCGGAAAGCCT 180 |||||||||||||| || |||||||||||||||||||| ||||||||||| ||||| || Sbjct 61 CTTTCCATTCTCTGTGGTGCTGAAGTTGCGTTTCTCGGATACTCTTGCTCAGGAAAACCA 120 Query 181 TACACATTCGGCAGCCCATCCTTCCAAGCCGTGGCAGAGCGGTTTCTCAA-CGGCGAGTC 239 |||||||||||||| || || || ||||||||||||||||| |||||||| | | ||| Sbjct 121 TACACATTCGGCAGTCCGTCTTTTCAAGCCGTGGCAGAGCGATTTCTCAATC-GTGAG-- 177 Query 240 CTCCTCGTCTTCTTCATCGTTGCAACGATCGGTCATGAATGCTCACCAGCAAGCGAAGAT 299 | | || ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 178 ------G-CCTCATCATCGTTGCAACGATCGGTCATGAATGCTCACCAACAAGCGAAGAT 230 Query 300 TCAAGAGCTTTGCAAAGTATACAACAGAATGGTGGAGAAGGCAAAGGCGGAAGAAGTCAA 359 |||||||||||||||||||||||| |||||||||||| |||||||| ||||||||| ||| Sbjct 231 TCAAGAGCTTTGCAAAGTATACAATAGAATGGTGGAGGAGGCAAAGACGGAAGAAGCCAA 290 Query 360 AGTAAAGAAGGCGGCTGCATTGGCGGAGA-AGATGCCC-TTGAATGAGGATGCGTGGTGG 417 |||||||||||| |||||||| ||||||| | |||||| | | ||||||||||||||||| Sbjct 291 AGTAAAGAAGGCAGCTGCATTAGCGGAGACA-ATGCCCGTAG-ATGAGGATGCGTGGTGG 348 Query 418 AAAGTGGATCCAAAGGAGGTG-AAGGATCATGAAGAGGCGAAGAAGATACTGGAAAAGTG 476 ||||||||||||||||||||| ||| |||| |||||||||||||||||| |||||||||| Sbjct 349 AAAGTGGATCCAAAGGAGGTGGAAG-ATCACGAAGAGGCGAAGAAGATAATGGAAAAGTG 407 Query 477 TGAAGGGCTCTATGAGAAACTGTGTGACGAAGCTGCTGCAAGGATCCAGAGGGGAGATG 535 ||||||||||||||||||||||||| | |||||||||||||||||||| || ||||||| Sbjct 408 TGAAGGGCTCTATGAGAAACTGTGTAATGAAGCTGCTGCAAGGATCCAAAGAGGAGATG 466 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 31898683345 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5