BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg336145

Length=966
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT2G03200.1 | Symbols:  | Eukaryotic aspartyl protease family p...   132    7e-30


> AT2G03200.1 | Symbols:  | Eukaryotic aspartyl protease family 
protein | chr2:966451-967918 REVERSE LENGTH=1468
Length=1468

 Score =  132 bits (71),  Expect = 7e-30
 Identities = 79/83 (95%), Gaps = 0/83 (0%)
 Strand=Plus/Plus

Query  1     ATGGGAAGTTCTAATGGGATGTCTATTTTCGGAAATGTTGAGCAGCAGAATTTTAATGTA  60
             ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct  1294  ATGGGAAGTTCTAATGGGATGTCTATTTTCGGAAATGTTCAACAGCAGAATTTTAATGTA  1353

Query  61    CTTCATGATCCTAAGAAAGAAAC  83
             |||||||||| | ||||||||||
Sbjct  1354  CTTCATGATCTTGAGAAAGAAAC  1376



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 47270332327


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5