BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg336206
Length=2166
Score E
Sequences producing significant alignments: (Bits) Value
AT1G30935.1 | Symbols: | pseudogene, F-box protein family, con... 691 0.0
AT1G30940.1 | Symbols: | pseudogene, F-box protein -related, c... 553 3e-156
AT1G30930.1 | Symbols: | F-box family protein | chr1:11014783-... 460 2e-128
AT1G30470.1 | Symbols: | SIT4 phosphatase-associated family pr... 418 1e-115
AT1G31163.1 | Symbols: | F-box associated ubiquitination effec... 231 2e-59
AT1G33020.1 | Symbols: | F-box and associated interaction doma... 183 5e-45
AT1G31080.1 | Symbols: | F-box family protein | chr1:11091832-... 161 2e-38
AT1G30920.1 | Symbols: | F-box family protein | chr1:11004242-... 141 3e-32
AT1G30945.1 | Symbols: | pseudogene, hypothetical protein | ch... 128 2e-28
AT2G02660.1 | Symbols: | F-box associated ubiquitination effec... 76.8 8e-13
AT1G67130.1 | Symbols: | F-box family protein | chr1:25099262-... 73.1 1e-11
AT2G16450.1 | Symbols: | F-box and associated interaction doma... 65.8 2e-09
> AT1G30935.1 | Symbols: | pseudogene, F-box protein family, contains
F-box domain Pfam:PF00646 | chr1:11017436-11018990 REVERSE
LENGTH=1555
Length=1555
Score = 691 bits (374), Expect = 0.0
Identities = 684/826 (83%), Gaps = 51/826 (6%)
Strand=Plus/Plus
Query 6 CATCCCAAAGGAAGATGAAGATGAAAAGCGTGTGTTATGTGACCCTCTCACAGGACAATA 65
|||||||||||||||||| |||| |||||||||||| |||||||||||||| || || ||
Sbjct 345 CATCCCAAAGGAAGATGAGGATGCAAAGCGTGTGTTGTGTGACCCTCTCACTGGCCAGTA 404
Query 66 TGTTATCTTACCTGAACTTAGAGGTCACTCGT-ATTCGTATAGCTATTTAGGGTTTGATC 124
||| |||||||||||||||||| || | || ||||||||||||||||||||||||||
Sbjct 405 TGTGATCTTACCTGAACTTAGA-GT-A--GGTGGTTCGTATAGCTATTTAGGGTTTGATC 460
Query 125 CGGTTGATAAGGAATTCAAGGTGTTGTTCATGAATACTAGTGATTTTATGGCTTATAATT 184
|| ||||||||||||||||||| ||||||||| ||||| |||||||||| |||| ||
Sbjct 461 CGATTGATAAGGAATTCAAGGTATTGTTCATGGATACTTGTGATTTTATAGCTTCGAAGG 520
Query 185 AT-ACAGATCATCATATTTTGACACTAGGAGCTGGAGAATTGAAATGGAGGAAGATCCAA 243
|| | ||||||| ||||||||||| | ||| ||||||||||||| |||||||||||||||
Sbjct 521 ATGA-AGATCATTATATTTTGACATTGGGAACTGGAGAATTGAAGTGGAGGAAGATCCAA 579
Query 244 TGTCCTTTTACTCATGAGCCCTTTTGGGAAAGGATATGCATTAATGGAGTTTTGTATTAC 303
||||||||||| |||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct 580 TGTCCTTTTACACATGAGCCTTTTTGGGAGAGGATATGCATTAATGGGGTTTTGTATTAC 639
Query 304 TCAGCTCAAC-ATTCTGATTCTAGTCGAAAAAGGTCTTATGTGATAGTTTGCTTTGATGT 362
|| ||| || |||||||||||| | | ||||||| || | |||| ||||||||||||
Sbjct 640 TCTGCT-TACTATTCTGATTCTAAT-G--GAAGGTCTCATCTCATAGCTTGCTTTGATGT 695
Query 363 TAGGTCTGAGAAATTCAAGTTCATACGCG-CAGAACG-CTGTCATGGTCAGTTGATAAAC 420
|||||||||||||||||| |||||| || || ||| | || | | |||||||||||||
Sbjct 696 TAGGTCTGAGAAATTCAATTTCATA-GCCACAAAACATCGGT-ACGATCAGTTGATAAAC 753
Query 421 TATAAGGGGAAGTTATGTGGGGTTAATGTGTAGTATAATTG---TGGTGGTGGTTTTCCC 477
||||||||||| ||||||||| ||||| || ||||| | | || |||||| |||||
Sbjct 754 TATAAGGGGAAATTATGTGGGATTAATTTGGAGTATGCTAGGCATGTTGGTGGATTTCCT 813
Query 478 CTTAAGTTGAGTATGTGGGTTCTAGAGGATGTCGAGAAACCGGAATGGTCTAAATATGTA 537
|||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||
Sbjct 814 GTTAAGTTGAGTATGTGGGTTTTAGAGGATGTCGAGAAACCGGAATGGTCGAAACATGTC 873
Query 538 TACTCTTTGTGGGCTGA---T-A--T--TAAAG-TTGCCCGCTATCTTTCCGTTTCTGGG 588
|||||||||||| | || | | | | ||| || ||| ||||||| |||||||||
Sbjct 874 TACTCTTTGTGGACGGAGAGTGAAGTCGTTAAGGTTAACCGGAATCTTTCTGTTTCTGGG 933
Query 589 ATGACTGCTACCGGTGACATTGTTTTGTCGATGGAAAACACGTCTAACCCATTTTATGTC 648
|||||||| ||||||||||||||||| ||||||||| | | |||| || ||||||||
Sbjct 934 ATGACTGCAACCGGTGACATTGTTTTATCGATGGAAGATGCAACTAATCCGTTTTATGTT 993
Query 649 TTCTACTTCAATCCCGGA-AGGAAAACTCTTCAA-T-----GTGTTGAAATCCAAGGTTT 701
||| |||||||||| ||| ||||| ||||| ||| | ||||||||||||||||| |
Sbjct 994 TTCAACTTCAATCC-GGATAGGAACACTCTCCAAGTCCAAAGTGTTGAAATCCAAGGTCT 1052
Query 702 TGGTGGTAATCGTG-T----T---T-GC-A--CCTTTGTAGACTATGTAGAGGATCTTAG 749
||| | |||||||| | | | || | ||||||| ||||||||||| ||| ||||
Sbjct 1053 TGGAGCTAATCGTGATCACATAGCTTGCCATGCCTTTGTTGACTATGTAGAAGATTTTAG 1112
Query 750 TATTAACGTTGAAATGCAA-AAC--AAGTCAAGCCCTTTACAACAA 792
| ||| || || | ||| ||| |||||||||||||||||||||
Sbjct 1113 TGTTAGCGATGCAGTGCTGCAACTCAAGTCAAGCCCTTTACAACAA 1158
Score = 582 bits (315), Expect = 4e-165
Identities = 734/920 (80%), Gaps = 94/920 (10%)
Strand=Plus/Plus
Query 1160 AGTTGTCTAAAGGGATAAGCCGATA-CAATTGTAGCTATGCCTCTGGTTTGATCTA---T 1215
|||| ||| ||||| |||| || | | | || | ||||||||||||||||||||| |
Sbjct 275 AGTTTTCTTCAGGGAAAAGCAGACATC-AGTGCACCTATGCCTCTGGTTTGATCTATTTT 333
Query 1216 T---ATA-G--CAT-CCGAAGCAAGGATGAGGATGAAAAGCGTGTGATT-TGTAACCCCC 1267
| | | | ||| || ||| || |||||||||| |||||||||| || ||| |||| |
Sbjct 334 TAAAAAATGTTCATCCCAAAGGAA-GATGAGGATGCAAAGCGTGTG-TTGTGTGACCCTC 391
Query 1268 TCACAGGACAGTATGTGATCTTACCTGAACTTAGAGTAGGTCATTCGTATAGCTATACAA 1327
|||| || |||||||||||||||||||||||||||||||| | | | | | |
Sbjct 392 TCACTGGCCAGTATGTGATCTTACCTGAACTTAGAGTAGG----T-G----G-T-T-C-- 437
Query 1328 TGTTTAGCTATTTAATGTTTGATCCGATAGACAAGGAATTCAAGGTATTGTTCAT-GA-A 1385
|| |||||||||| |||||||||||| || ||||||||||||||||||||||| || |
Sbjct 438 -GTATAGCTATTTAGGGTTTGATCCGATTGATAAGGAATTCAAGGTATTGTTCATGGATA 496
Query 1386 CCTTAATCG-TTATACAGCTTATAATTATGTAGATCATTATATTTTGACACTGGGAACTG 1444
||| | | || || ||||| || ||| ||||||||||||||||||| ||||||||
Sbjct 497 -CTT-GT-GATTTTATAGCTTCGAAGGATGAAGATCATTATATTTTGACATTGGGAACT- 552
Query 1445 GGA-AATTGAGGTGGAGGAAGATCCAATGTCCTTTTACCCATGAG-CTTTTTGAGGGA-A 1501
||| |||||| ||||||||||||||||||||||||||| |||||| |||||| |||| |
Sbjct 553 GGAGAATTGAAGTGGAGGAAGATCCAATGTCCTTTTACACATGAGCCTTTTT--GGGAGA 610
Query 1502 GGATATGCATTAATGGAGTTTTGTATTACTCAGCTGAAC-ATTCTGATTCTGATGGAAGA 1560
|||||||||||||||| |||||||||||||| ||| || ||||||||||| || | ||
Sbjct 611 GGATATGCATTAATGGGGTTTTGTATTACTCTGCT-TACTATTCTGATTCTAAT-G--GA 666
Query 1561 AGGTCTTGTGTGTTAGTTTGCTTTGATGTTAGGTCCGAGAAATTCAAGTTCATAGGCGCA 1620
|||||| | | ||| |||||||||||||||||| ||||||||||| ||||||| | ||
Sbjct 667 AGGTCTCATCTCATAGCTTGCTTTGATGTTAGGTCTGAGAAATTCAATTTCATAGCCACA 726
Query 1621 AGAA-A-CTGTCATTATCAGCTGATAAACTATAAGGGAAAATTATGTGAGATTAATGTGG 1678
| || | | || | ||||| |||||||||||||||| |||||||||| ||||||| |||
Sbjct 727 A-AACATCGGT-ACGATCAGTTGATAAACTATAAGGGGAAATTATGTGGGATTAATTTGG 784
Query 1679 AGTATGCT---TATGATGGTAGATTTCCCCCCAAGTTGAGTATGTGGGTTCTAGAGGATG 1735
|||||||| ||| |||| ||||||| |||||||||||||||||| |||||||||
Sbjct 785 AGTATGCTAGGCATGTTGGTGGATTTCCTGTTAAGTTGAGTATGTGGGTTTTAGAGGATG 844
Query 1736 TCGAGAAACCGGAATGGTCGAAATATGTGTACTCTTTG-G-ATGTTGAG--A-GTA---A 1787
||||||||||||||||||||||| |||| ||||||||| | | | ||| | || |
Sbjct 845 TCGAGAAACCGGAATGGTCGAAACATGTCTACTCTTTGTGGACGGAGAGTGAAGTCGTTA 904
Query 1788 AG-TTG-CCAGCTATCTTTAC-GTTTCTGGGATGACTGCTACCGGTGACATTGTTTTGTT 1844
|| || || | |||||| | ||||||||||||||||| ||||||||||||||||| |
Sbjct 905 AGGTTAACCGGA-ATCTTT-CTGTTTCTGGGATGACTGCAACCGGTGACATTGTTTTATC 962
Query 1845 GATGGATA-ACACATCTAACCCTTTTTATGTCTTCTACTTCAATCCGGAAAGGAAAACTC 1903
|||||| | | || |||| || |||||||| ||| ||||||||||||| ||||| ||||
Sbjct 963 GATGGA-AGATGCAACTAATCCGTTTTATGTTTTCAACTTCAATCCGGATAGGAACACTC 1021
Query 1904 T-----TC-AAATTGTTGAAATCCAAGG-CATTGGAAG-TAATCGTG-T----T---T-G 1946
| || ||| ||||||||||||||| | ||||| | |||||||| | | | |
Sbjct 1022 TCCAAGTCCAAAGTGTTGAAATCCAAGGTC-TTGGA-GCTAATCGTGATCACATAGCTTG 1079
Query 1947 C-A--CCTTTGTAGACTATGTAGAGGATCTTAGTGTTAACGTTGCA---CTGCAAAACAA 2000
| | ||||||| ||||||||||| ||| ||||||||| || |||| |||||| |||
Sbjct 1080 CCATGCCTTTGTTGACTATGTAGAAGATTTTAGTGTTAGCGATGCAGTGCTGCAACTCAA 1139
Query 2001 GTCAAGCCCTTTACAAGAAC 2020
|||||||||||||||| |||
Sbjct 1140 GTCAAGCCCTTTACAACAAC 1159
> AT1G30940.1 | Symbols: | pseudogene, F-box protein -related,
contains TIGRfam:TIGR01640 F-box protein interaction domain
| chr1:11021984-11023320 REVERSE LENGTH=1337
Length=1337
Score = 553 bits (299), Expect = 3e-156
Identities = 739/937 (79%), Gaps = 87/937 (9%)
Strand=Plus/Plus
Query 1 ATGCGCATCCCAAAGGAAGATGAAGATGAAAAGCGTGTGTTATGTGACCCTCTCACAGGA 60
||| |||||| |||||| ||||| |||| ||||| ||| |||||||||||||||||||||
Sbjct 328 ATGTGCATCCGAAAGGAGGATGAGGATGCAAAGCATGTTTTATGTGACCCTCTCACAGGA 387
Query 61 CAA-TATGTTATCTTACCTGAACTTAGAGGTCACTCGT-ATTCGTATAGCTATTTAGGGT 118
|| ||||| |||||||||||||||||| || | || |||||||||||||||||||||
Sbjct 388 -AAGTATGTGATCTTACCTGAACTTAGA-GT-A--GGTGATTCGTATAGCTATTTAGGGT 442
Query 119 TTGATCCGGTTGATAAGGAATTCAAGGTGTTGTTCATGAATACTAGTGATTTTATGGCTT 178
||||||| |||||||||||||||||||| |||||||||| |||| || || ||| ||||
Sbjct 443 TTGATCCAGTTGATAAGGAATTCAAGGTATTGTTCATGACTACTCGTAATAATATAGCTT 502
Query 179 ATAATTATAC-AGATCATCATATTTTGACACTAGGAGCTGGAGAATTGAAATGGAGGAAG 237
|| || | ||||||| ||||| ||||| | ||| |||| |||||||||||||||| |
Sbjct 503 GGAAGGAT-CTAGATCATTATATTCTGACATTGGGAACTGGGGAATTGAAATGGAGGAGG 561
Query 238 ATCCAATGTCCTTTTACTCATGAGCCCTTT-TGGGAAAGGATATGCATTAATGGAGTTTT 296
|||| |||| ||||||| |||||||| | | ||||||||||| || || |||||||||||
Sbjct 562 ATCCGATGTGCTTTTACCCATGAGCC-TGTGTGGGAAAGGATTTGTATCAATGGAGTTTT 620
Query 297 GTATTACTCAGCTCAACA-TTCTGATTCTAGTCGAAAAAGGTCTTATGTGATAGTTTGCT 355
||||||||||||| | | ||||||| | |||| | | ||||||||||||| |
Sbjct 621 GTATTACTCAGCT-ATGAATTCTGAT----G--GAAA----T-T-ATGTGATAGTTTGTT 667
Query 356 TTGATGTTAGGTCTGAGAAA-TTCAAGTTCATAC-GC-GCAGAACGCTGTCATGGTCAGT 412
||||||||| || || || | | || | || | | | | | |||| | |
Sbjct 668 TTGATGTTATTTCA-AGCTCGTTGACG--CAGAATGCCGTTCTA-GATTTAATGG--A-T 720
Query 413 TGATAAACTATAAGGGGAAGTTATGTGGGGTTAATGTGTAGTATAATTGTG--G-TGGTG 469
||||||||||||||||||| ||||||||| ||| | || ||||| | || | |||||
Sbjct 721 TGATAAACTATAAGGGGAAATTATGTGGGATTATTTTGGAGTATGCTAGTCATGATGGTG 780
Query 470 GTTTTCCCCTTAAGTTGAGTATGTGGGTTCTAGAGGATGTCGAGAAACCGGAATGGTCTA 529
| | | || |||||||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct 781 GATCTACCGTTAAGTTGAGTATGTGGGTTTTAGAGGATGTCGAGAAACCGGAATGGTCGA 840
Query 530 AATATGTATACTCTTTGTGGGCTGA---T-A--T--TAAAG-TTGCCCGCTA-TCTTTCC 579
|| |||| ||||| |||||| | || | | | | ||| || || || ||||||
Sbjct 841 AACATGTCTACTCGTTGTGGACGGAGAGTCAAGTCGTTAAGGTTAACCA-TAATCTTTCT 899
Query 580 GTTTCTGGGATGACTGCTACCGGTGACATTGTTTTGTCGATGGAAAACACG--TCTAACC 637
|||||||||||||||||||||||||||||||||||||||| |||| | | ||| | |
Sbjct 900 GTTTCTGGGATGACTGCTACCGGTGACATTGTTTTGTCGAC--AAAATATGCATCTCAGC 957
Query 638 CATTTTATGTCTTCTACTTCAATCCCGGAAGGAAAACTCTTCAA-T-----GTGTTGAAA 691
| |||||||| |||||||||||||| | |||||||||||| ||| | ||||||||
Sbjct 958 CGTTTTATGTTTTCTACTTCAATCCAGAAAGGAAAACTCTGCAAGTCCCAAGTGTTGAAG 1017
Query 692 TCCAAGGTTTTGGTGGTAATCGTG-TT---TG-C--A---C-C-TTTG-TAGACTATGTA 738
|| | ||| |||| | |||||||| || || | | | | |||| | |||||||||
Sbjct 1018 TCGAGGGTCTTGGAGCTAATCGTGCTTGCATGTCTTATTACGCCTTTGCT-GACTATGTA 1076
Query 739 GAGGATCTTAGTATTAACGTTGAAATGCAA-AAC--AAGTCAAGCCCTTTACAACAAT-- 793
|||||||||||| |||||| || | ||| | ||| |||||||||||||||||||||
Sbjct 1077 GAGGATCTTAGTGTTAACGATGCAGTGCGACAACTCAAGTCAAGCCCTTTACAACAACAA 1136
Query 794 G-CCGAAATATCGTTA--AAGAGAAGC-AGAAACCACAACAACGCGG-GCATACATCTCG 848
| || ||||||||||| ||||| || | ||||||| |||| || | |||||||||
Sbjct 1137 GGCCAAAATATCGTTACCAAGAG--GCCA-AAACCACGACAAGGCCAAG-ATACATCTCA 1192
Query 849 TGACCTCTGCAATTCTGCGCCGTCTGTGAAGAACAAG 885
|||||||| ||| ||||| ||||||||||||||||||
Sbjct 1193 TGACCTCTCCAAGTCTGCTCCGTCTGTGAAGAACAAG 1229
Score = 512 bits (277), Expect = 5e-144
Identities = 799/1028 (78%), Gaps = 128/1028 (12%)
Strand=Plus/Plus
Query 1156 ATGGAGTTGTCTAAAGGGATAAGCCGA-TACAATTGTAGCTATGCCTCTGGTTTGATCTA 1214
||| |||| |||||||| ||||| | | || |||||| ||||||||||||||||| ||
Sbjct 259 ATGAAGTTTTCTAAAGGCATAAG-CAATTATTCTTGTAGTTATGCCTCTGGTTTGATTTA 317
Query 1215 --TT-A---TA---GCATCCG-AAGCAAGGATGAGGATGAAAAGCGTGTGATT-TGTAAC 1263
|| | || ||||||| ||| |||||||||||| ||||| ||| || ||| ||
Sbjct 318 TTTTGATGGTATGTGCATCCGAAAG-GAGGATGAGGATGCAAAGCATGT-TTTATGTGAC 375
Query 1264 CCCCTCACAGGACAGTATGTGATCTTACCTGAACTTAGAGTAGGTCATTCGTATAGCTAT 1323
|| ||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct 376 CCTCTCACAGGAAAGTATGTGATCTTACCTGAACTTAGAGTAGGTGATTCGTATAGC--T 433
Query 1324 ACAATGTTTAGCTATTTAATGTTTGATCCGA-TAGACAAGGAATTCAAGGTATTGTTCAT 1382
| ||||| ||||||||| | | || |||||||||||||||||||||||
Sbjct 434 ---A--TTTAG--------GGTTTGATCC-AGTTGATAAGGAATTCAAGGTATTGTTCAT 479
Query 1383 GAACCTTAATCGT--T-ATACAGCTTATAATTATGTAGATCATTATATTTTGACACTGGG 1439
| | | || |||| | ||| ||||| || || |||||||||||||| ||||| ||||
Sbjct 480 G-A-C-TACTCGTAATAATATAGCTTGGAAGGATCTAGATCATTATATTCTGACATTGGG 536
Query 1440 AACTGGGAAATTGAGGTGGAGGAAGATCCAATGTCCTTTTACCCATGAG-CTTTTTGAGG 1498
||||||| |||||| ||||||| ||||| |||| |||||||||||||| || | || ||
Sbjct 537 AACTGGGGAATTGAAATGGAGGAGGATCCGATGTGCTTTTACCCATGAGCCTGTGTG-GG 595
Query 1499 GAAGGATATGCATTAATGGAGTTTTGTATTACTCAGCTGAACATTCTG-ATTCTGATGGA 1557
|||||| || || |||||||||||||||||||||||| | || ||||||||||
Sbjct 596 AAAGGATTTGTATCAATGGAGTTTTGTATTACTCAGCT----A---TGAATTCTGATGG- 647
Query 1558 AGAAGGTCTTGTGTGTTAGTTTGCTTTGATGTTAGGTCCGAGAAATTCAAGTTCATAGGC 1617
| || || |||| ||||||| |||||||||| | |||||| || | | |
Sbjct 648 A-AA----TTATGTGATAGTTTGTTTTGATGTTA--T--------TTCAAGCTCGTTGAC 692
Query 1618 GCAAGAA-ACTG-TC---A-TT-ATCAG-CTGATAAACTATAAGGGAAAATTATGTGAGA 1669
|| |||| | | || | || || | |||||||||||||||| |||||||||| ||
Sbjct 693 GC-AGAATGCCGTTCTAGATTTAAT-GGATTGATAAACTATAAGGGGAAATTATGTGGGA 750
Query 1670 TTAATGTGGAGTATGCT--T-ATGATGGTAGATTTCCCCCCAAGTTGAGTATGTGGGTTC 1726
||| | ||||||||||| | |||||||| ||| | || ||||||||||||||||||
Sbjct 751 TTATTTTGGAGTATGCTAGTCATGATGGTGGATCTACCGTTAAGTTGAGTATGTGGGTTT 810
Query 1727 TAGAGGATGTCGAGAAACCGGAATGGTCGAAATATGTGTACTC-TT-TGGATGTTGAG-- 1782
|||||||||||||||||||||||||||||||| |||| ||||| || |||| | |||
Sbjct 811 TAGAGGATGTCGAGAAACCGGAATGGTCGAAACATGTCTACTCGTTGTGGACGGAGAGTC 870
Query 1783 A-GTA---AAG-TTG-CCAGCTA-TCTTTAC-GTTTCTGGGATGACTGCTACCGGTGACA 1834
| || ||| || ||| || ||||| | ||||||||||||||||||||||||||||
Sbjct 871 AAGTCGTTAAGGTTAACCA--TAATCTTT-CTGTTTCTGGGATGACTGCTACCGGTGACA 927
Query 1835 TTGTTTTGTTGATGGA-TAACACATCTAACCCTTTTTATGTCTTCTACTTCAATCCGGAA 1893
||||||||| || | || ||||| | || |||||||| |||||||||||||| |||
Sbjct 928 TTGTTTTGTCGACAAAATATG-CATCTCAGCCGTTTTATGTTTTCTACTTCAATCCAGAA 986
Query 1894 AGGAAAACTCTTCAAAT------TGTTGAAATCCAAGG-CATTGGAAG-TAATCGTG-TT 1944
||||||||||| ||| | ||||||| || | || | ||||| | |||||||| ||
Sbjct 987 AGGAAAACTCTGCAAGTCCCAAGTGTTGAAGTCGAGGGTC-TTGGA-GCTAATCGTGCTT 1044
Query 1945 ---TG-C--A---C-C-TTTG-TAGACTATGTAGAGGATCTTAGTGTTAACGTTGCACTG 1992
|| | | | | |||| | |||||||||||||||||||||||||||| |||| ||
Sbjct 1045 GCATGTCTTATTACGCCTTTGCT-GACTATGTAGAGGATCTTAGTGTTAACGATGCAGTG 1103
Query 1993 CAA-AAC--AAGTCAAGCCCTTTACAAGAAC--G-CCGAAATATCGTTACGGAGAAGCTT 2046
| | ||| |||||||||||||||||| ||| | || |||||||||||| ||| ||
Sbjct 1104 CGACAACTCAAGTCAAGCCCTTTACAACAACAAGGCCAAAATATCGTTACCAAGAGGCC- 1162
Query 2047 AAAAC-ACAACAACGCCG-GCATACATCTCATGACCTCTGCAAGTTTGCCCCGTCTGTGA 2104
||||| || |||| ||| | |||||||||||||||||| ||||| ||| ||||||||||
Sbjct 1163 AAAACCACGACAAGGCCAAG-ATACATCTCATGACCTCTCCAAGTCTGCTCCGTCTGTGA 1221
Query 2105 AGAACAAG 2112
||||||||
Sbjct 1222 AGAACAAG 1229
> AT1G30930.1 | Symbols: | F-box family protein | chr1:11014783-11015913
REVERSE LENGTH=1131
Length=1131
Score = 460 bits (249), Expect = 2e-128
Identities = 655/835 (78%), Gaps = 92/835 (11%)
Strand=Plus/Plus
Query 1 ATGCGCATCCCAAAGGAAGATGAAGATGAAAAGCGTGTGTTATGTGACCCTCTCACAGGA 60
||||| ||||||||||| |||||||||||||||| |||||| ||||| ||||||||||||
Sbjct 340 ATGCGTATCCCAAAGGAGGATGAAGATGAAAAGCCTGTGTTGTGTGATCCTCTCACAGGA 399
Query 61 CAA-TATGTTATCTTACCTGAACTTAGAGGTCA-CTCGTATTCGTATAGCTATTTAGGGT 118
|| ||||||||||||||||||| |||| || | | ||| | |||||||||||||||||
Sbjct 400 -AAGTATGTTATCTTACCTGAACCTAGA-GT-ATTTGGTA-T-GTATAGCTATTTAGGGT 454
Query 119 TTGATCCGGTTGATAAGGAATTCAAGGTGTTGTTCATGAATACTAGTGATTTTATGGCTT 178
||||||| |||||||||||||||||||| ||||||||| | || | | || || ||||
Sbjct 455 TTGATCCAGTTGATAAGGAATTCAAGGTATTGTTCATGGCTTCT-G-G-TTATACAGCTT 511
Query 179 ATAATTATACAGATCATCATATTTTGACACTAG-GAGCTGGAGAATTGAAATGGAGGA-A 236
|| || ||||||| ||||| ||||| | | || |||| |||||||||||||||| |
Sbjct 512 CCAAGGATGTAGATCATTATATTCTGACA-TTGAGAACTGGGGAATTGAAATGGAGGACA 570
Query 237 GATCCAATGTCCTTTTACTCATGAGCCCTTTTG-GGA-AAGGATATGCATTAATGGAGTT 294
||||||||||||||||| |||||| || |||| ||| |||||| || || |||||||||
Sbjct 571 -ATCCAATGTCCTTTTACCCATGAG-CC-TTTGTGGACAAGGATTTGTATCAATGGAGTT 627
Query 295 TTGTATTACTCAGCTCA--ACATTCTGATTCTAGTCGAAAAAGGTCTTATGTGATAGTTT 352
||||||||||||||| | | ||||||| | | | ||| ||||||||||||||
Sbjct 628 TTGTATTACTCAGCT-ATGA-ATTCTGA---T-G--G--AAA----TTATGTGATAGTTT 673
Query 353 GCTTTGATGTTAGGTCTGAGAAATTCAAGTTCATACG-CGCAGAA---CG--CTGTCATG 406
| ||||||||||| | ||||||||| ||| || | | | || || || ||| ||
Sbjct 674 GTTTTGATGTTAGATATGAGAAATTTAAGCTCGT-TGACACAAAATGTCGTTCTG-AAT- 730
Query 407 GTCA--G-TTGATAAACTATAAGGGGAAGTTATGTGGGGTTAATG-TGTAGTATAATTGT 462
| | | |||||||||||||||||||| |||||||||||||| | || ||||| || |
Sbjct 731 TTAATGGATTGATAAACTATAAGGGGAAATTATGTGGGGTTAA-GTTGAAGTATGCTTAT 789
Query 463 GGTGGTGGTTTTCCCCTTAAGTTGA-GTATGTGGGTTCTAGAGGATGTCGAGAAACCGGA 521
||| ||| |||||| ||||||| | ||||| | |||||||||||||| |||||| ||
Sbjct 790 CGTGTTGGATTTCCCGTTAAGTT-ACGTATGCGAGTTCTAGAGGATGTTGAGAAAGATGA 848
Query 522 ATGGTCTAAATATGTATACTCTTTGTGGGCTGATATTAAAGTTGCCCGCTATCTTTCCGT 581
|||||| | |||||| || || | | || || | | | ||||||||||
Sbjct 849 ATGGTCGACATATGT-TA--------AGGTTAAGGTT-AA---G-CAG-AATCTTTCCGT 893
Query 582 TTCTGGGATGACTGCTACCGGTGACATTGTTTTGT-CGATGGAAAACA-CGTCTAACCCA 639
| ||||||||||||||||||||||||||||||||| | ||| ||| ||||||| ||
Sbjct 894 TGCTGGGATGACTGCTACCGGTGACATTGTTTTGTTC-ATG-AAATTTGCGTCTAATCCG 951
Query 640 TTTTATGTCTTCTACTTCAATCCCGGAA-GGAAAACTCT-----TC-AATGTGTTGAAAT 692
|||||||| |||||||||||||| |||| |||| |||| || || ||||||||||
Sbjct 952 TTTTATGTTTTCTACTTCAATCC-GGAAAGGAACTCTCTCGAAGTCCAAAGTGTTGAAAT 1010
Query 693 CCAAGGTTTTGGTGGTAATC--G-T-G--T---TTGCA-C-C-TTTGTAGACTATGTAGA 740
||||||| |||| | ||||| | | | | ||||| | | |||||||| ||||||||
Sbjct 1011 CCAAGGTCTTGGAGCTAATCCTGATCGCATAGCTTGCAACGCCTTTGTAGATTATGTAGA 1070
Query 741 GGATCTTAGTATTAACGTTGAAATGCAA-AAC--AAGTCAAGCCCTTTACAACAA 792
|||||||||| |||||| || ||||| ||| || |||| |||||||||||||
Sbjct 1071 GGATCTTAGTGTTAACGATGCAATGCTGCAACTCAACTCAATCCCTTTACAACAA 1125
Score = 405 bits (219), Expect = 9e-112
Identities = 678/880 (77%), Gaps = 109/880 (12%)
Strand=Plus/Plus
Query 1187 ATTGTAGCTATGCCTCTGGTTTGATCTA--TT--A--TA-GC--AT-CCGAAGCAAGGAT 1236
||| || |||||||||||||||||| || || | || || || || ||| |||||
Sbjct 302 ATTTTACCTATGCCTCTGGTTTGATTTATTTTAAATGTATGCGTATCCCAAAG-GAGGAT 360
Query 1237 GAGGATGAAAAGCGTGTGATT-TGTAACCCCCTCACAGGACAGTATGTGATCTTACCTGA 1295
|| |||||||||| |||| || ||| | || ||||||||| ||||||| |||||||||||
Sbjct 361 GAAGATGAAAAGCCTGTG-TTGTGTGATCCTCTCACAGGAAAGTATGTTATCTTACCTGA 419
Query 1296 ACTTAGAGTAGGTCATTCGTATAGCTATACAATGTTTAGCTATTTAATGTTTGATCCGA- 1354
|| ||||||| | || | | | |||| |||||||||| ||||||||| |
Sbjct 420 ACCTAGAGTA--T--TT-G----G---T---ATGTATAGCTATTTAGGGTTTGATCC-AG 463
Query 1355 TAGACAAGGAATTCAAGGTATTGTTCATGAACCTTAATCGTTATACAGCTTATAATTATG 1414
| || |||||||||||||||||||||||| ||| | |||||||||||| || |||
Sbjct 464 TTGATAAGGAATTCAAGGTATTGTTCATG--GCTT-CTGGTTATACAGCTTCCAAGGATG 520
Query 1415 TAGATCATTATATTTTGACACTGGGAACTGGGAAATTGAGGTGGAGGA-AGATCCAATGT 1473
|||||||||||||| ||||| || |||||||| |||||| ||||||| | |||||||||
Sbjct 521 TAGATCATTATATTCTGACATTGAGAACTGGGGAATTGAAATGGAGGACA-ATCCAATGT 579
Query 1474 CCTTTTACCCATGAG-CTTTTTGAGGGAAGGATATGCATTAATGGAGTTTTGTATTACTC 1532
||||||||||||||| |||| || | |||||| || || ||||||||||||||||||||
Sbjct 580 CCTTTTACCCATGAGCCTTTGTG-GACAAGGATTTGTATCAATGGAGTTTTGTATTACTC 638
Query 1533 AGCTGAACATTCTG-ATTCTGATGGAAGAAGGTCTTGTGTGTTAGTTTGCTTTGATGTTA 1591
|||| | || |||||||||| | || || |||| ||||||| ||||||||||
Sbjct 639 AGCT----A---TGAATTCTGATGG-A-AA----TTATGTGATAGTTTGTTTTGATGTTA 685
Query 1592 GGTCCGAGAAATTCAAGTTCATAGGCGCAAGAAACT-G-TC---A-TT-ATCAG-CTGAT 1643
| | |||||||| ||| || | | | ||| || | | || | || || | ||||
Sbjct 686 GATATGAGAAATTTAAGCTCGTTGACACAA-AATGTCGTTCTGAATTTAAT-GGATTGAT 743
Query 1644 AAACTATAAGGGAAAATTATGTGAGATTAATG-TGGAGTATGCTTAT-GATGGTAGATTT 1701
|||||||||||| |||||||||| | |||| | || ||||||||||| | || | |||||
Sbjct 744 AAACTATAAGGGGAAATTATGTGGGGTTAA-GTTGAAGTATGCTTATCG-TGTTGGATTT 801
Query 1702 CCCCCCAAGTTGA-GTATGTGGGTTCTAGAGGATGTCGAGAAACCGGAATGGTCGAAATA 1760
||| ||||| | ||||| | |||||||||||||| |||||| |||||||||| |||
Sbjct 802 CCCGTTAAGTT-ACGTATGCGAGTTCTAGAGGATGTTGAGAAAGATGAATGGTCGACATA 860
Query 1761 TGTGTACTCTTTGGATGTTGAGAGTAAAGTTGCCAGCTATCTTTACGTTTCTGGGATGAC 1820
||| || | ||| || || || | ||| |||||| |||| ||||||||||
Sbjct 861 TGT-TA--------AGGTTAAG-GTTAA---G-CAG-AATCTTTCCGTTGCTGGGATGAC 905
Query 1821 TGCTACCGGTGACATTGTTTTGTTGATGGA-TAACACATCTAACCCTTTTTATGTCTTCT 1879
|||||||||||||||||||||||| ||| | | | ||||| || |||||||| ||||
Sbjct 906 TGCTACCGGTGACATTGTTTTGTTCATGAAATTTG-CGTCTAATCCGTTTTATGTTTTCT 964
Query 1880 ACTTCAATCCGGAAAGGAAAACTCT-----TC-AAATTGTTGAAATCCAAGG-CATTGGA 1932
||||||||||||||||||| |||| || ||| ||||||||||||||| | |||||
Sbjct 965 ACTTCAATCCGGAAAGGAACTCTCTCGAAGTCCAAAGTGTTGAAATCCAAGGTC-TTGGA 1023
Query 1933 AG-TAATC--G-T-G--T---TTGCA-C-C-TTTGTAGACTATGTAGAGGATCTTAGTGT 1979
| ||||| | | | | ||||| | | |||||||| ||||||||||||||||||||
Sbjct 1024 -GCTAATCCTGATCGCATAGCTTGCAACGCCTTTGTAGATTATGTAGAGGATCTTAGTGT 1082
Query 1980 TAACGTTGCA---CTGCAAAACAAGTCAAGCCCTTTACAA 2016
||||| |||| |||||| ||| |||| ||||||||||
Sbjct 1083 TAACGATGCAATGCTGCAACTCAACTCAATCCCTTTACAA 1122
> AT1G30470.1 | Symbols: | SIT4 phosphatase-associated family
protein | chr1:10779171-10786666 FORWARD LENGTH=2939
Length=2939
Score = 418 bits (226), Expect = 1e-115
Identities = 254/268 (95%), Gaps = 0/268 (0%)
Strand=Plus/Plus
Query 894 CAAGTTTCCTTTCATTGCCTGTGAAATCTTCACATGTGAGATTGAAATGATACTGAAAAC 953
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 480 CAAGTTTCCTTTCATTGCCTGTGAAATTTTCACATGTGAGATTGAAATGATACTGAAAAC 539
Query 954 ACTAGTCGAGGATGAGGAGTTGATGCTATTGCTGTTTTCGTTCTTAGAAGATAAAGAAAC 1013
|||||| || ||||||||||||||| |||| |||||||||| || |||| |||||||||
Sbjct 540 ACTAGTAGAAGATGAGGAGTTGATGTTATTATTGTTTTCGTTTTTGGAAGCTAAAGAAAC 599
Query 1014 CCATAACTCATTGCTTGCCGGGTACTTCAGCAAGGTTGTCATTTGTCTGCTGGTGCGGAA 1073
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 600 CCATAACTCATTACTTGCCGGGTACTTCAGCAAGGTTGTCATTTGTCTGCTGGTGCGGAA 659
Query 1074 GACGATCCCTTTCATGCAATTTATAAAAGATCATCAAGAAATACTGAAGCAGCTTGTTGA 1133
||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 660 GACGATCCCATTCATGCAATTTATAAAAGATCATCAAGAAATTCTGAAGCAGCTTGTTGA 719
Query 1134 TTTAATTGGTATTACATCTATAATGGAG 1161
||| ||||||||||||||||| ||||||
Sbjct 720 TTTGATTGGTATTACATCTATTATGGAG 747
> AT1G31163.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr1:11128732-11130239 REVERSE LENGTH=1031
Length=1031
Score = 231 bits (125), Expect = 2e-59
Identities = 187/216 (87%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 1593 GTCCGAGAAATTCAAGTTC-ATAGGCGCAAG-AAACTGTCATTATCAGCTGATAAACTAT 1650
||||||||||||||||||| | ||| || || |||||| ||||||||| |||||||||||
Sbjct 150 GTCCGAGAAATTCAAGTTCGA-AGGTGC-AGAAAACTGCCATTATCAGTTGATAAACTAT 207
Query 1651 AAGGGAAAATTATGTGAGATTAATGTGGAGTATGCTTATGATGGTAGATTTCCCCCCAAG 1710
||||||||||||||||||||| |||||||||||||| ||||| | ||||||||| |||
Sbjct 208 AAGGGAAAATTATGTGAGATTTATGTGGAGTATGCTCGTGATGTTGGATTTCCCCTTAAG 267
Query 1711 TTGAGTATGTGGGTTCTAGAGGATGTCGAGAAACCGGAATGGTCGAAATATGTGTACTCT 1770
|||| |||| ||||||||||||||||||| || | ||||||||||||| |||| ||||||
Sbjct 268 TTGATTATGCGGGTTCTAGAGGATGTCGATAAGCAGGAATGGTCGAAAGATGTCTACTCT 327
Query 1771 TTGGATGT-TGAGAGTAAAGTTG-CCAGCTATCTTT 1804
||| || | |||||| ||| ||| ||| | ||||||
Sbjct 328 TTGTAT-TCTGAGAGAAAATTTGGCCA-CGATCTTT 361
> AT1G33020.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr1:11962746-11964832 FORWARD LENGTH=1647
Length=1647
Score = 183 bits (99), Expect = 5e-45
Identities = 458/619 (74%), Gaps = 73/619 (12%)
Strand=Plus/Plus
Query 1333 AGCTATTTAATGTTTGATCCGATAGACAAGGAATTCAAGGTATTGTTCATGAACCT-TAA 1391
|||| |||| |||||||||||| |||||| |||||||||||||| |||||| | |||
Sbjct 463 AGCTTTTTAGGGTTTGATCCGATTGACAAGCAATTCAAGGTATTGCGCATGAA-ATATAA 521
Query 1392 TCGTTATACAGCTTATAATTATGTAGATCATTATATTTTGACACTGGGAA-CTGGGAAAT 1450
| | || | | | | | | ||| | ||| ||||| ||||| | ||| |||| |||
Sbjct 522 T-G--AT-C-G-TGGT-A-T-TGTTGTTCACCATATTCTGACA-TTAGAACCTGGCAAAA 571
Query 1451 TGAGGTGGAGGAAGATCCAATGTCCTTTTA-CCCATG-AGCTTTTTGAGGGAAG-GATAT 1507
|||||||||| || |||| |||||| ||| |||||| | |||| | |||||| |||||
Sbjct 572 TGAGGTGGAGAAAAATCCGATGTCC-CTTAGCCCATGAACCTTTCT--GGGAAGAGATAT 628
Query 1508 GCATTAATGGAGTTTTGTATTACTCAGCTGAACATTCTGATTCTGATGGAAGAAGGTCTT 1567
|| ||||| ||||||||||||| |||||||| | | ||||||| || ||||||
Sbjct 629 GCGCCAATGGGGTTTTGTATTACTTAGCTGAAC---C--A-ACTGATGG-AG--GGTCTT 679
Query 1568 GTGTGTTAGT-TTGCTTTGATGTTAGGTCCGAGAAATTCAAGTTCATAGGCGCAAGAA-A 1625
|||| || | ||||||||||||| |||| ||||||||||| || || | ||||| ||
Sbjct 680 ATGTGATA-TGTTGCTTTGATGTTCGGTCTGAGAAATTCAAATTTATTGACGCAA-AATG 737
Query 1626 C--T-GTCA----T-TA-TCAGCTGATAAACTATAAGGGAAAATTATGTGAGATTAATGT 1676
| | || | | || ||| |||| || |||||||| ||| || ||| ||||| | |
Sbjct 738 CTTTGGTGATTTCTCTATTCAATTGATCAATTATAAGGGTAAACTAGGTGGGATTAGT-T 796
Query 1677 GG-AGTATGCTTA---T-GATGGTAGA-TTTCCCCCCAAGTTG-AGTATGTGGGTTCTAG 1729
|| |||||| || | ||||| | | | || ||||| | ||||||||||||||
Sbjct 797 GGAAGTATG-ATACCGTCGATGG-AAAGCGTACCGTTGAGTTGTA-TATGTGGGTTCTAG 853
Query 1730 AGGATGTCGAGAAACCGGAATGGTCGAAATATGTGTACTCTTTGGATGTTGAGAGTAAAG 1789
||||||||||||||| | ||||||| ||||| || ||| ||||| | | | | ||
Sbjct 854 AGGATGTCGAGAAACAGAAATGGTCCAAATACGTCTACCCTTTGCC-G--G-G-G-AA-- 905
Query 1790 TTGCC-AGCTATCT-TTACGTTTCTGG-GATGACTGCTACCGGTGACATTGTTTT-GTTG 1845
|| || | | || | || |||| | || | |||| |||| ||||| |||||||| ||
Sbjct 906 TT-CCTACC-AT-TATTCCGTTGCAGGAG-TGACAGCTAAAGGTGATATTGTTTTTGTCA 961
Query 1846 ATGGA-TAACACATCTAACCCTTTTTATGTCTTCTACTTCAATCCGGAAAGGAAAACTCT 1904
| | | | |||||||||| || |||||||| |||||| | ||||| |||| ||||||| |
Sbjct 962 A-G-ACTTACACATCTAAACCGTTTTATGTTTTCTACGTAAATCCCGAAAAGAAAACT-T 1018
Query 1905 TCAAATT-GTTGAAATCCA 1922
|| || |||||||||||
Sbjct 1019 TCCAACGCGTTGAAATCCA 1037
Score = 161 bits (87), Expect = 2e-38
Identities = 507/697 (73%), Gaps = 80/697 (11%)
Strand=Plus/Plus
Query 34 CGTGTGTTATGTGACCCTCTCACAGGACAATATGTTATCTTAC--CTGAACTTAGAGGT- 90
|||||| ||||| ||||| |||| |||||||||| ||||||| ||| | | | | |
Sbjct 394 CGTGTGATATGTAACCCTATCACGGGACAATATGCGATCTTACAACTG-A-TAACA-TTC 450
Query 91 CACTCGTATTCGTATAGCTATTTAGGGTTTGATCCGGTTGATAAGGAATTCAAGGTGTTG 150
||| | | | | |||| |||||||||||||||| |||| ||| |||||||||| |||
Sbjct 451 CACGAG-AAGAG-A-AGCTTTTTAGGGTTTGATCCGATTGACAAGCAATTCAAGGTATTG 507
Query 151 TTCATG-AATACTAGTGATTTTATGGCTTATAATTATACAGATCATCATATTTTGACACT 209
|||| |||| || ||| | ||| | ||| | | ||| |||||| ||||| |
Sbjct 508 CGCATGAAATA-TAATGA--TCGTGG----T-ATTGT--TGTTCACCATATTCTGACATT 557
Query 210 AGGAGCTGG-AGAATTGAAATGGAGGAAGATCCAATGTCCTTTTA-CTCATGAGCCCTTT 267
|| | |||| | || ||| ||||| || |||| |||||| ||| | ||||| |||||
Sbjct 558 AGAACCTGGCA-AAATGAGGTGGAGAAAAATCCGATGTCC-CTTAGCCCATGA-ACCTTT 614
Query 268 -TGGGAAAG-GATATGCATTAATGGAGTTTTGTATTACTCAGCTCAA-CATTCTGATTCT 324
|||| ||| ||||||| ||||| ||||||||||||| |||| || || |||| |
Sbjct 615 CTGGG-AAGAGATATGCGCCAATGGGGTTTTGTATTACTTAGCTGAACCA-ACTGA---T 669
Query 325 AGTCGAAAAAGGTCTTATGTGATAGT-TTGCTTTGATGTTAGGTCTGAGAAATTCAAGTT 383
| | | |||||||||||||| | ||||||||||||| |||||||||||||||| ||
Sbjct 670 -G--G---AGGGTCTTATGTGATA-TGTTGCTTTGATGTTCGGTCTGAGAAATTCAAATT 722
Query 384 CATACG-CGCAGAA--C---GCTG---TC-ATGGTCAGTTGATAAACTATAAGGGGAAGT 433
|| | |||| || | | || || | ||| ||||| || |||||||| ||
Sbjct 723 TAT-TGACGCAAAATGCTTTGGTGATTTCTCTATTCAATTGATCAATTATAAGGGTAAAC 781
Query 434 TATGTGGGGTTA-ATGTGTAGTAT-A-ATTGT-GGTGG-TGGTTTTCCCCTTAAGTTG-A 487
|| ||||| ||| || | ||||| | | || | ||| | | || || ||||| |
Sbjct 782 TAGGTGGGATTAGTTG-GAAGTATGATACCGTCGATGGAAAG-CGTACCGTTGAGTTGTA 839
Query 488 GTATGTGGGTTCTAGAGGATGTCGAGAAACCGGAATGGTCTAAATATGTATACTCTTTGT 547
||||||||||||||||||||||||||||| | ||||||| ||||| || ||| |||||
Sbjct 840 -TATGTGGGTTCTAGAGGATGTCGAGAAACAGAAATGGTCCAAATACGTCTACCCTTTGC 898
Query 548 -GGGCTGATATTAAAGTTGCCCGCTATCTTTCCGTTTCTGG-GATGACTGCTACCGGTGA 605
||| || ||| | || ||| | ||||| | || | |||| |||| |||||
Sbjct 899 CGGG--GA-ATTCC--TA-CCAT-TAT-T--CCGTTGCAGGAG-TGACAGCTAAAGGTGA 947
Query 606 CATTGTTTT-GTCGATGGAAA-ACACGTCTAACCCATTTTATGTCTTCTACTTCAATCCC 663
|||||||| ||| | | | |||| ||||| || |||||||| |||||| | ||||||
Sbjct 948 TATTGTTTTTGTCAA-G-ACTTACACATCTAAACCGTTTTATGTTTTCTACGTAAATCCC 1005
Query 664 GGAAGGAAAACTCTTC-AATGTGTTGAAATCCAAGGT 699
| || ||||||| ||| || | ||||||||||| |||
Sbjct 1006 GAAAAGAAAACT-TTCCAACGCGTTGAAATCCATGGT 1041
> AT1G31080.1 | Symbols: | F-box family protein | chr1:11091832-11092899
FORWARD LENGTH=1068
Length=1068
Score = 161 bits (87), Expect = 2e-38
Identities = 234/303 (77%), Gaps = 17/303 (6%)
Strand=Plus/Plus
Query 1640 TGATAAACTATAAGGGAAAATTATGTGAGA-T-TAATGTGGAGTATGCTTATGATGGTAG 1697
|||||||||||||||| |||||| ||| || | ||||| | || || | || ||||| |
Sbjct 539 TGATAAACTATAAGGGTAAATTAGGTGTGACTATAATG-GAAG-AT--T-ATCATGGTGG 593
Query 1698 ATTTCCCCCCAAGTTGAGTATGTGGGTTCTAGAGGATGTCGAGAAACCGGAATGGTCGAA 1757
|||||||| |||||| ||||||||||||||||||||||||||||| ||||||| |||
Sbjct 594 ATTTCCCCTTAAGTTGCGTATGTGGGTTCTAGAGGATGTCGAGAAAGAGGAATGGACGAG 653
Query 1758 ATATGTGTACTCTTTGGATGT-TGAGAGTAAAGTTGC---CA--G-CTATCTTTACGTT- 1809
||||| ||| ||||| | | ||||| |||||| | || | |||| | || |||
Sbjct 654 ATATGCCTACACTTTG-AGGCCTGAGAATAAAGTCGAGGACAATGACTATGTATATGTTG 712
Query 1810 TCTGGGATGACTGCTACCGGTGACATTGTTTTGTTGATGGATAACACATCTAACCCTTTT 1869
| |||| |||||| | ||||| ||||||||| || | || ||| ||| || |||
Sbjct 713 T-TGGGGCAACTGCTTCAGGTGAAATTGTTTTGACGAAACAGAATGCATATAAACCGTTT 771
Query 1870 TATGTCTTCTACTTCAATCCGGAAAGGAAAACTCTTCAAATTGTTGAAATCCAAGGCATT 1929
||||| |||||||| | ||| |||||||| ||||| | || |||||||||||||| ||
Sbjct 772 TATGTTTTCTACTTTAGTCCTGAAAGGAACACTCTCCTAAGCGTTGAAATCCAAGGTGTT 831
Query 1930 GGA 1932
|||
Sbjct 832 GGA 834
Score = 159 bits (86), Expect = 8e-38
Identities = 290/384 (76%), Gaps = 32/384 (8%)
Strand=Plus/Plus
Query 346 ATAGTTTGCTTTGATGTTAGGTCTGAGAAATTCAAG--TTCATA-C---GCGCAGAACGC 399
|||| ||||||||||||||||||||||||||||||| || ||| | || |||| ||
Sbjct 457 ATAGGTTGCTTTGATGTTAGGTCTGAGAAATTCAAGTTTTTATATCTAAGCCCAGATTGC 516
Query 400 TGT-C--A-TGGTC-AG----TTGATAAACTATAAGGGGAAGTTATGTG-GGGT-TAATG 448
| | | | ||||| || ||||||||||||||||| || ||| ||| | | |||||
Sbjct 517 TTTCCAAACTGGTCTAGAAAATTGATAAACTATAAGGGTAAATTAGGTGTGACTATAATG 576
Query 449 TGTAGTATAATTGTGGTGGTGGTTTTCCCCTTAAGTTGAGTATGTGGGTTCTAGAGGATG 508
| | | ||| | |||||| ||||||||||||||| |||||||||||||||||||||
Sbjct 577 -G-A--A-GATTATCATGGTGGATTTCCCCTTAAGTTGCGTATGTGGGTTCTAGAGGATG 631
Query 509 TCGAGAAACCGGAATGGTCTAAATATGTATACTCTTTGTGGGCTGATATTAAAGTTGCC- 567
|||||||| ||||||| | | ||||| ||| ||||| || |||| | |||||| |
Sbjct 632 TCGAGAAAGAGGAATGGACGAGATATGCCTACACTTTGAGGCCTGAGAATAAAGTCGAGG 691
Query 568 -C---G-CTATCTTTCCGTT-TCTGGGATGACTGCTACCGGTGACATTGTTTTGTCGATG 621
| | |||| | | ||| | |||| |||||| | ||||| ||||||||| |||
Sbjct 692 ACAATGACTATGTATATGTTGT-TGGGGCAACTGCTTCAGGTGAAATTGTTTTGACGAAA 750
Query 622 GAAAACACGTCTAACCCATTTTATGTCTTCTACTTCAATCCCGGAAGGAAAACTCTTC-A 680
| || | | ||| || |||||||| |||||||| | ||| | |||||| ||||| | |
Sbjct 751 CAGAATGCATATAAACCGTTTTATGTTTTCTACTTTAGTCCTGAAAGGAACACTCTCCTA 810
Query 681 ATGTGTTGAAATCCAAGGTTTTGG 704
| | ||||||||||||||| ||||
Sbjct 811 A-GCGTTGAAATCCAAGGTGTTGG 833
> AT1G30920.1 | Symbols: | F-box family protein | chr1:11004242-11005444
REVERSE LENGTH=1203
Length=1203
Score = 141 bits (76), Expect = 3e-32
Identities = 462/634 (73%), Gaps = 83/634 (13%)
Strand=Plus/Plus
Query 111 TTTAGGGTTTGATCCGGTTGATAAGGAATTCAAGGTGTTGTTCATGAATACTAGT-GATT 169
|||||||||||||||| |||| ||| |||||||||| || || | ||| | | || |
Sbjct 477 TTTAGGGTTTGATCCGATTGACAAGCAATTCAAGGTATTAATCCCG-ATA-T--TCGA-T 531
Query 170 TTATGGCTTATA-ATTATACAGATCATCATATT-TTGACACTAGGAGCTGGAGA-A-TTG 225
|| | | || | || | || |||||||||||| || ||| |||||||| || | | |||
Sbjct 532 TT-T-G-ATAAACATCAAACGGATCATCATATTCTT-ACATTAGGAGCT-GAAACAGTTG 586
Query 226 AAATGGAGGAAGATCCAATGTCCTTTTACTCATGAGC--CCTTTTGGGAAAGG----ATA 279
|||||||||||||||| ||| |||| | | | | ||| | | || || ||
Sbjct 587 -GGTGGAGGAAGATCCAATCTCC-CTTACGC-T-ATCTTCCTCATAGTAATGGAACAATT 642
Query 280 TGCATTAAT-GGAGTTTTGTATTA-CTCAGCTCAACATT-CTGATTCTAGTCGA-AAAAG 335
||||| ||| ||| |||||||||| || |||| || ||| | || | | | || ||||
Sbjct 643 TGCATCAATGGGA-TTTTGTATTACCT-AGCT-AAAATTAATTATGC-AATGGATAAAA- 697
Query 336 GTCTTATGTGATAGTTTGCTTTGATGTTAGGTCTGAGAAATTCAAGTT-CATACG-CG-- 391
||||| |||||||||||||||||||||||||||| || ||| | |||| |
Sbjct 698 -----ATGTGCTAGTTTGCTTTGATGTTAGGTCTGAGAATTTTGTGTTTC-TACGTCTTA 751
Query 392 -CAGA-AC-GCTGT-CATGGTCAGTTGATAAACTATAAGGGGAAGTTATGTGGGGTTAAT 447
|| | || ||| | | | | | ||| ||||||||||||| || ||| | | |||||
Sbjct 752 ACACATACTGCTCTTC-TACTAAATTGGTAAACTATAAGGGTAAATTAGGCATGATTAAT 810
Query 448 GT-GTAGTATAATTG-TGGTGGTGGTTTTCCCCTTAAGTTGAGTATGTGGGTTCTAGAGG 505
| ||||| ||| || ||||||||||||||| ||||| ||| |||||||||||||||
Sbjct 811 CAAG-AGTATG-TTGATGATGGTGGTTTTCCCCTAAAGTTAAGTGTGTGGGTTCTAGAGG 868
Query 506 ATGTCGAGAAACCG--GAATGGTCTAAATATGTATACTCTTTGTGGGCTGATATTAAAGT 563
|||||| |||| | |||||||| | |||||| ||| ||||| ||| ||||| ||||||
Sbjct 869 ATGTCG-GAAAA-GAAGAATGGTCGACATATGTCTACACTTTGAGGGATGATAATAAAGT 926
Query 564 TGCCC-GCT-A--TCT--T-TC-C-GTT-TCTGGGATGACTGCTACCGGTGACATTGTTT 613
| | | | | | | | || | ||| | |||| |||||||| | ||||| |||||||
Sbjct 927 CGATCAGGTTAAATATAATCTCTCCGTTGT-TGGGGTGACTGCTTCAGGTGAAATTGTTT 985
Query 614 TG-TCGATG--GA---AAACACGTCTAACCCATTTTATGTCTTCTACTTCAATCCCGG-A 666
|| | || | || |||||| | ||| ||||||||||| || ||||| || |||| |
Sbjct 986 TGGT-GAAGAAGACTCAAACAC-T-TAAGCCATTTTATGTTTTATACTTTAACCCCGACA 1042
Query 667 AGGAAA-ACTCT-TCAATGTGTTGAAATCCAAGG 698
| ||| ||||| | || ||||||| || ||||
Sbjct 1043 A--AAATACTCTCTTAAC-TGTTGAAGTCAAAGG 1073
> AT1G30945.1 | Symbols: | pseudogene, hypothetical protein |
chr1:11026338-11026784 REVERSE LENGTH=447
Length=447
Score = 128 bits (69), Expect = 2e-28
Identities = 339/460 (74%), Gaps = 55/460 (12%)
Strand=Plus/Plus
Query 263 CCTTTTGGGAAAG-GATATGCATTAATGGAGTTTTGTATTACTC-AGCTCAACATTCTGA 320
|||||| |||||| ||||||||| ||||| |||||||||||||| ||| | ||| |
Sbjct 6 CCTTTTTGGAAAGAGATATGCATCAATGGGGTTTTGTATTACTCTGGCT--A-GTTCAG- 61
Query 321 TTCTAGTCGAAAAAGGTCTTATGTGATAGTTTGC-TTTGATGTTAGGTCTGAGAAATTCA 379
|| | | | | | || | | ||||||||| | |||||| ||||||||||||||||||
Sbjct 62 CTC-A-T-G-GATA--TC-T-TCTGATAGTTT-CTTTTGATTTTAGGTCTGAGAAATTCA 112
Query 380 AGTTCATAC-GCGCA-GAA-C--GC---TGTCATGGT-C--AGTTGATAAACTATAAGGG 428
| || || | ||| || | | | |||| | | | ||||||||||| || ||
Sbjct 113 ATTTTAT-CAATGCATCAAGCTTCCTTTTTTCAT-CTACAAAATTGATAAACTACAAAGG 170
Query 429 GAAGTTATGTGGGGTTAATGTGTAGTATAATTGTGGTGGTGGT-TTTCCCCTTAAGTTGA 487
|| ||| ||||| || || || ||||||| ||||||| || | |||| || |||| |
Sbjct 171 TAAATTAGGTGGGATTGATTTGGCGTATAATCATGGTGGT-GTATATCCCGTTGAGTT-A 228
Query 488 -GTATGTGGGTTCTAGAGGATGTCGAGAAAC-CGGAATGGTCTAAATATGTATACTCTTT 545
|||||||||||||||||||||||||||||| || ||||||| | | |||| ||||||||
Sbjct 229 CGTATGTGGGTTCTAGAGGATGTCGAGAAACACG-AATGGTCGAGACATGTTTACTCTTT 287
Query 546 GT-GG-G-C--T-GATATTA-A--AGT-TGCCCGCTATCTTTCCGTTTCTGGGATGACTG 595
| || | | | || ||| | ||| | | | || ||| |||| |||||||| ||
Sbjct 288 GCCGGAGACCATTGA-ATTTCAGCAGTGTAACTACAATATTTGCGTTGGTGGGATGAATG 346
Query 596 CTACCGGTGACATTGTTTTGTCG-A-TGGA-A-A-A-C-ACGTCTAACCCATTTTATGTC 648
||| ||||| |||||||| ||| | | | | | | | || || || || ||||||||
Sbjct 347 CTATAGGTGAAATTGTTTTTTCGGAGTC-ATATATATCTACATCCAAACCGTTTTATGTT 405
Query 649 TTCTACTTCAATCCCGGAAGGAAAA-CTCTTCAATGTGTT 687
|||||||||||||||| || ||||| | ||| || |||||
Sbjct 406 TTCTACTTCAATCCCGAAAAGAAAAACACTTTAAGGTGTT 445
Score = 108 bits (58), Expect = 3e-22
Identities = 213/283 (75%), Gaps = 29/283 (10%)
Strand=Plus/Plus
Query 1640 TGATAAACTATAAGGGAAAATTATGTGAGATTAATGTGGAGTATGCTTATGATGGTAG-A 1698
|||||||||| || || |||||| ||| |||| || ||| |||| | ||| |||| | |
Sbjct 155 TGATAAACTACAAAGGTAAATTAGGTGGGATTGATTTGGCGTATAATCATGGTGGT-GTA 213
Query 1699 TTTCCCCCCAAGTTGA-GTATGTGGGTTCTAGAGGATGTCGAGAAAC-CGGAATGGTCGA 1756
| |||| |||| | |||||||||||||||||||||||||||||| || |||||||||
Sbjct 214 TATCCCGTTGAGTT-ACGTATGTGGGTTCTAGAGGATGTCGAGAAACACG-AATGGTCGA 271
Query 1757 AATATGTGTACTCTTTG--G-ATG----TTGAGAGTA-A--AGT-TGCC-AGCTATCTTT 1804
| |||| ||||||||| | | | |||| | | | ||| | | | | || |||
Sbjct 272 GACATGTTTACTCTTTGCCGGA-GACCATTGA-ATTTCAGCAGTGTAACTA-CAATATTT 328
Query 1805 ACGTTTCTGGGATGACTGCTACCGGTGACATTGTTTTGTT-G-A-TGG-ATA-A-C-ACA 1857
|||| |||||||| ||||| ||||| |||||||| || | | | ||| | | |||
Sbjct 329 GCGTTGGTGGGATGAATGCTATAGGTGAAATTGTTTT-TTCGGAGTCATATATATCTACA 387
Query 1858 TCTAACCCTTTTTATGTCTTCTACTTCAATCCGGAAAGGAAAA 1900
|| || || |||||||| |||||||||||||| |||| |||||
Sbjct 388 TCCAAACCGTTTTATGTTTTCTACTTCAATCCCGAAAAGAAAA 430
> AT2G02660.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr2:738504-739769 FORWARD LENGTH=1266
Length=1266
Score = 76.8 bits (41), Expect = 8e-13
Identities = 41/41 (100%), Gaps = 0/41 (0%)
Strand=Plus/Plus
Query 339 TTATGTGATAGTTTGCTTTGATGTTAGGTCTGAGAAATTCA 379
|||||||||||||||||||||||||||||||||||||||||
Sbjct 657 TTATGTGATAGTTTGCTTTGATGTTAGGTCTGAGAAATTCA 697
> AT1G67130.1 | Symbols: | F-box family protein | chr1:25099262-25100625
REVERSE LENGTH=1176
Length=1176
Score = 73.1 bits (39), Expect = 1e-11
Identities = 158/210 (75%), Gaps = 30/210 (14%)
Strand=Plus/Plus
Query 187 ACAGATCATCATATTTTGACACTAGGAGCTGGAGAATTGA-AA-TGGAGGAAG-ATCCAA 243
||| ||||| ||||| ||||| ||||| | || || ||| || |||||| || ||||||
Sbjct 428 ACA-ATCATTATATTCTGACATTAGGAAC-AGA-AAATGATAAGTGGAGG-AGTATCCAA 483
Query 244 TG-TCCTTTTA-CTCATGAGCCCTTTTGGG-AAAG---GATATGCATTAATGGAGTTTTG 297
| ||| || | | || | |||| |||| |||| ||||||||||||||||||||||
Sbjct 484 AGTTCC-TTAAGGT-AT-CGTCCTTGTGGGCAAAGCCCGATATGCATTAATGGAGTTTTG 540
Query 298 TATTAC-TCAGCTCAAC-ATTCTGATT-CTAG-TCGAAAAAGGTCTTATGTGATAGTTTG 353
|||||| | |||| | | || | | | || ||||| | ||||||||| |||
Sbjct 541 TATTACAT-AGCTTA-CGATACACAGGAC-AGCTCGAAT--G-----ATGTGATAGGTTG 590
Query 354 CTTTGATGTTAGGTCTGAGAAATTCAAGTT 383
||||||||||||| |||||||||||||||
Sbjct 591 TTTTGATGTTAGGTTTGAGAAATTCAAGTT 620
Score = 52.8 bits (28), Expect = 1e-05
Identities = 28/28 (100%), Gaps = 0/28 (0%)
Strand=Plus/Plus
Query 1503 GATATGCATTAATGGAGTTTTGTATTAC 1530
||||||||||||||||||||||||||||
Sbjct 519 GATATGCATTAATGGAGTTTTGTATTAC 546
> AT2G16450.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr2:7131520-7132803 REVERSE LENGTH=1284
Length=1284
Score = 65.8 bits (35), Expect = 2e-09
Identities = 39/41 (95%), Gaps = 0/41 (0%)
Strand=Plus/Plus
Query 339 TTATGTGATAGTTTGCTTTGATGTTAGGTCTGAGAAATTCA 379
|||| |||||||||||||||||||||||||||| |||||||
Sbjct 720 TTATATGATAGTTTGCTTTGATGTTAGGTCTGAAAAATTCA 760
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 107429166300
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5