BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg336568
Length=849
Score E
Sequences producing significant alignments: (Bits) Value
AT1G31400.1 | Symbols: | TRAF-like family protein | chr1:11245... 809 0.0
AT1G31390.1 | Symbols: | TRAF-like family protein | chr1:11243... 791 0.0
AT1G31380.1 | Symbols: | TRAF-like family protein | chr1:11240... 468 4e-131
AT1G31370.1 | Symbols: | Ubiquitin-specific protease family C1... 414 6e-115
AT3G27040.1 | Symbols: | Meprin and TRAF (MATH) homology domai... 219 5e-56
AT2G05420.1 | Symbols: | TRAF-like family protein | chr2:19839... 182 6e-45
AT2G01790.1 | Symbols: | TRAF-like family protein | chr2:34132... 176 3e-43
AT2G05410.1 | Symbols: | TRAF-like family protein | chr2:19769... 174 1e-42
AT3G58370.1 | Symbols: | TRAF-like family protein | chr3:21595... 106 4e-22
AT3G58380.1 | Symbols: | TRAF-like family protein | chr3:21597... 93.5 3e-18
AT3G29580.1 | Symbols: | Arabidopsis phospholipase-like protei... 84.2 2e-15
AT3G44800.1 | Symbols: | Meprin and TRAF (MATH) homology domai... 65.8 7e-10
AT3G58240.1 | Symbols: | TRAF-like superfamily protein | chr3:... 54.7 1e-06
> AT1G31400.1 | Symbols: | TRAF-like family protein | chr1:11245225-11246481
REVERSE LENGTH=837
Length=837
Score = 809 bits (438), Expect = 0.0
Identities = 716/846 (85%), Gaps = 35/846 (4%)
Strand=Plus/Plus
Query 10 CAATATGAAAAGAAGATAACATGGACGATCAAGAATTTCTCCACTTTGCAATCTAATG-A 68
||||||||||||| ||||||||||||||| |||||||||||| ||||||||||| ||| |
Sbjct 10 CAATATGAAAAGAGGATAACATGGACGATTAAGAATTTCTCCTCTTTGCAATCTCATGCA 69
Query 69 ATTTTATTCCGATAATTTCGTAGTTGGTGACTCCAAATGGCGTCTTCTGGCCTATCCCAA 128
| |||||| |||| ||| |||||||| ||| ||||||||| ||||||||||||||||||
Sbjct 70 A-TTTATTTTGATATTTTTGTAGTTGGGGACACCAAATGGCATCTTCTGGCCTATCCCAA 128
Query 129 GGGAAATGGAGATGGTTTTAATAAAAGTTTTTCTCTGTTTC-TGGCTGTTGCTGATTCTG 187
|||| |||| ||| | |||||||| |||| |||||||||| ||| |||| ||||| |||
Sbjct 129 GGGATATGGTGATAGCATTAATAAATGTTTGTCTCTGTTTCTTGG-TGTTCCTGATCCTG 187
Query 188 AAT-CTTTGCCTAATGGTTGGAAAAGACACATCAAATATCGTCTAACTGTTGTTAATCAA 246
|| ||||||| |||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct 188 -ATGATTTGCCTTCTGGTTGGAAAAGACACATCATATATCGTCTTACTGTTGTTAATCAA 246
Query 247 ATGTCGGAGAAACTTTCTAAACAGGAAGAATTACAATCCTGGTTTGATCAGAATTCTCTT 306
|||||||||||||| || |||||||||| | || | ||||| | | || ||||||
Sbjct 247 ATGTCGGAGAAACTCTCCAAACAGGAAGTAGCACGGGGCGGGTTTTACCCGAGGTCTCTT 306
Query 307 AGCTGGGGCTACCC-AGCAATGCTTCCCCTTACCA-AACTTGTTGACGAAAATGATGGGT 364
| || || | ||| || ||||||||| |||| || ||| | || ||| |||||
Sbjct 307 ACCTTCGG-TTCCCAAGTAATGCTTCCACTTA-CAGAAC-T-TT-------ATGGTGGGT 355
Query 365 TTCTGGTGAATGGAGAAGTCAAGGTTGTTGCCGAGGTTGGTGTTCTTGAAGTTGTTGGCA 424
|| |||| | ||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 356 TTTTGGTTAGTGGCCAAGTCAAGATTGTTGCCGAGGTTGGTGTTCTTGAAGTTGTTGGCA 415
Query 425 AATCAGATGTGTTAGTGGAAACTTTATTAGTTCA-GGAAAGCATCGATGTCAATGGGTTT 483
| ||||||||||||| ||||||||| |||||| | ||| ||||| ||||||||||||||
Sbjct 416 AGTCAGATGTGTTAGAGGAAACTTTGTTAGTTAATGGAG-GCATCAATGTCAATGGGTTT 474
Query 484 CAAGTTCTTCCTTCTCAGGTAGACTCTGTGAACAATCTCTTTAAAAATTACCCAGACATT 543
|||||||||||||| |||||||| ||||||||||||||||| |||||| |||||||||||
Sbjct 475 CAAGTTCTTCCTTCACAGGTAGAATCTGTGAACAATCTCTTCAAAAATCACCCAGACATT 534
Query 544 GCATCAAAATTCTGTCTGGAGAACCAACT--TCTGAGAGCAACATACATGAATAGCCTAC 601
|||||||| ||| ||||||| ||| | || ||| ||| | |||||| ||||||||||||
Sbjct 535 GCATCAAACTTCCGTCTGGAAAAC-A-CTCATCTAAGAACTACATACTTGAATAGCCTAC 592
Query 602 TATGCTTGACTGAGATTCTGAGCCAGTCCCCTGAGAAACTCTCTAGTGTTGATCTCGCCA 661
|||||||||||||| ||||| ||||||||||| | |||||||| | ||||||||||||||
Sbjct 593 TATGCTTGACTGAGCTTCTGTGCCAGTCCCCTCATAAACTCTCCAATGTTGATCTCGCCA 652
Query 662 ATGCACATTGTACACTATCTTCTCTGACAAAAGCCGGTTTTAAGTTGGATTGGTTGGAGA 721
|||| || ||||| ||| ||| | |||||||||||||||||||||||||||||||||| |
Sbjct 653 ATGCGCACTGTACTCTAACTTGTGTGACAAAAGCCGGTTTTAAGTTGGATTGGTTGGAAA 712
Query 722 AGAAACTGAAAGAGCTTCGTGATACTCGGGTGCAACAACTTGAGCAAGATTTGAAGGACT 781
|||||||||||||| || || | |||||| ||||||||||||| ||| ||||||||||||
Sbjct 713 AGAAACTGAAAGAGGTTGGTAAGACTCGGATGCAACAACTTGAACAAAATTTGAAGGACT 772
Query 782 TGAAGGAAAAGTTTACGCTGGA---C-GA---TGAGGATGACTTTTGTCGACTCTGTTTA 834
||||||| | ||||| |||||| | || |||||||||| | ||||| |||||| |
Sbjct 773 TGAAGGAGA-GTTTATGCTGGAGTTCTGACGATGAGGATGACCTGAGTCGA-TCTGTT-A 829
Query 835 AGACTT 840
||||||
Sbjct 830 AGACTT 835
> AT1G31390.1 | Symbols: | TRAF-like family protein | chr1:11243191-11244392
REVERSE LENGTH=807
Length=807
Score = 791 bits (428), Expect = 0.0
Identities = 673/790 (85%), Gaps = 22/790 (3%)
Strand=Plus/Plus
Query 10 CAATATGAAAAGAAGATAACATGGACGATCAAGAATTTCTCCACTT-TGCAATCT-AATG 67
||||||||||||||||||||||||||||| |||||||||||| || |||||||| || |
Sbjct 10 CAATATGAAAAGAAGATAACATGGACGATTAAGAATTTCTCC-TTTGTGCAATCTCAA-G 67
Query 68 -AATTTTATTCCGATAATTTCGTAGTTGGTGACTCCAAATGGCGTCTTCTGGCCTATCCC 126
|| || |||| |||| |||||||||||||||||||||||||| |||| |||||||||||
Sbjct 68 CAA-TTGATTCTGATATTTTCGTAGTTGGTGACTCCAAATGGCATCTTGTGGCCTATCCC 126
Query 127 AAGGGAAATGGAGATGGTTTTAATAAAAGTTTTTCTCTGTTTCTGGCTGTTGCTGA-TTC 185
||||||||||| || || ||||||| |||| || |||| |||| |||||| || |||
Sbjct 127 AAGGGAAATGGTGAAAGTACTAATAAATGTTTGTCACTGTATCTGAATGTTGCGGATTTC 186
Query 186 TGAATCTTTGCCTAATGGTTGGAAAAGACACATCAAATATCGTCT-AACTGTTGTTAATC 244
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 187 -CAATCTTTGCCTAATGGTTGGAAAAGACACATCAAATATCG-CTTAACTGTTGTTAATC 244
Query 245 AAATGTCGGAGAAACTTTCTAAACAGGAAG-AATTACAATCCTGGTTTGATCAGAA-TTC 302
||||||||||||||||||| ||||||||| ||| |||| ||||||| || | || ||
Sbjct 245 AAATGTCGGAGAAACTTTCCGAACAGGAAGTAAT-ACAAGGCTGGTTTTATAAAAACTT- 302
Query 303 TCTTAGCTGGGGCTACCCAGCAATGCTTCCCCTTACCAAACTTGTTGACGAAAATGATGG 362
|| || || || | || | |||||||||||||| |||||||| ||||| |||||| |||
Sbjct 303 TCATATCTCTGGTTTCCAAACAATGCTTCCCCTTTCCAAACTTCTTGACAAAAATGGTGG 362
Query 363 GTTTCTGGTGAATGGAGAAGTCAAGGTTGTTGCCGAGGTTGGTGTTCTTGAAGTTGTTGG 422
||||||||||||||| || |||||| |||||| |||||| |||||||||||||| |||||
Sbjct 363 GTTTCTGGTGAATGGTGATGTCAAGATTGTTGTCGAGGTAGGTGTTCTTGAAGTCGTTGG 422
Query 423 CAAATCAGATGTGTTAGTGGAAACTTTATTAGTTCAGGAAAGCATCGATGTCAATGGGTT 482
||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||
Sbjct 423 CAAATCAGATGTGTTAGAGGAAACTTTATTAGTTCATGAAAGCATCGATATCAATGGGTT 482
Query 483 TCAAGTTCTTCCTTCTCAGGTAGACTCTGTGAACAATCTCTTTAAAAATTACCCAGACAT 542
||||||||||||||| |||||||| |||||||||||||||||| | || ||||||||||
Sbjct 483 TCAAGTTCTTCCTTCACAGGTAGAATCTGTGAACAATCTCTTTGAGAAGCACCCAGACAT 542
Query 543 TGCATCAAAATT-CTGTCTGGA-GAACCAACTTCTGAGAGCAACATACATGAAT-AGCCT 599
| |||| |||| | || | | ||||| |||| ||||| |||||||| ||||| | |||
Sbjct 543 CGTATCAGAATTTC-GT-TCCAAGAACCCACTTATGAGAACAACATACTTGAATGA-CCT 599
Query 600 ACTATGCTTGACTGAGATTCTGAGCCAGTCCCCTGAGAAACTCTCTAGTGTTGATCTCGC 659
|||||| ||||||||||| ||| || ||||| ||||| ||||||| | || |||| | ||
Sbjct 600 ACTATGTTTGACTGAGATCCTGTGCGAGTCCTCTGAGGAACTCTCCACTGGTGATATGGC 659
Query 660 CAATGCACATTGTACACTATCTTCTCTGACAAAAGCCGGTTTTAAGTTGGATTGGTTGGA 719
|| || ||| ||||||| ||| | ||| |||||| || ||||||||||||||| ||||
Sbjct 660 TAACGCGTATTCTACACTAACTTGTTTGAAAAAAGCGGGGTTTAAGTTGGATTGGCTGGA 719
Query 720 GAAGAAACTGAAAGAGCTTCGTGATACTCGGGTGCAACAACTTGA-GCAAGATTTGAAGG 778
|||||||||||||||| || |||| ||||||||||| || |||| | |||| | |||||
Sbjct 720 GAAGAAACTGAAAGAGGTTTGTGAGGCTCGGGTGCAAGAAATTGATG-AAGAGTGGAAGG 778
Query 779 ACTTGAAGGA 788
|||||| |||
Sbjct 779 ACTTGACGGA 788
> AT1G31380.1 | Symbols: | TRAF-like family protein | chr1:11240451-11241099
REVERSE LENGTH=528
Length=528
Score = 468 bits (253), Expect = 4e-131
Identities = 401/473 (85%), Gaps = 8/473 (2%)
Strand=Plus/Plus
Query 325 ATGCTTCCCCTTACCAAACTTGTTGACGAAAATGATGGGTTTCTGGTGAATGGAGAAGTC 384
||| ||||||||||||||||| ||||| |||||| ||||||| |||||||||||||||||
Sbjct 1 ATGGTTCCCCTTACCAAACTTCTTGACAAAAATGGTGGGTTTATGGTGAATGGAGAAGTC 60
Query 385 AAGGTTGTTGCCGAGGTTGGTGTTCTTGAAGTTGTTGGCAAATCAGATGTGTTAGTGGAA 444
||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 61 AAGATTGTTGCTGAGGTTGGTGTTCTTGAAGTTGTTGGCAAATCAGATGTGTTAGAGGAA 120
Query 445 ACTTTATTAGTTCA-GGAAAGCATCG-ATGTCAATGGGTTTCAAGTTCTTCCTTCTCAGG 502
|||| |||||| | ||||||||| | |||||||||||||||||||||||||||| ||||
Sbjct 121 ACTTCATTAGTG-ATGGAAAGCAT-GTATGTCAATGGGTTTCAAGTTCTTCCTTCACAGG 178
Query 503 TAGACTCTGTGAACAATCTCTTTAAAAATTACCCAGACATTGCATCAAAATTCTGTCTGG 562
|||| | |||||| | ||| ||| |||| ||||||| || | ||||||| || ||||
Sbjct 179 TAGAATTTGTGAAGAGTCTGTTTGAAAAGCACCCAGATATCGAATCAAAACTCCATCTGA 238
Query 563 AGAACCAACTTCTGAGAGCAACATACATGAATAGCCTACTATGCTTGACTGAGATTCTGA 622
|||||| || | ||||| ||||||| |||||||||||||| |||||||||||||||||
Sbjct 239 AGAACCCACATATGAGAATAACATACTTGAATAGCCTACTAACCTTGACTGAGATTCTGA 298
Query 623 GCCAGTCCCCTGAGAA-ACTCTCTAGTGTTGATCTCGCCAATGCACATTGTACACTATCT 681
|||||||||||||||| | | || | || |||| | ||||| ||| ||| ||| || |||
Sbjct 299 GCCAGTCCCCTGAGAACATT-TCCAATGATGATTTGGCCAACGCATATTCTACGCTCTCT 357
Query 682 TCTCTGACAAAAGCCGGTTTTAAGTTGGATTGGTTGGAGAAGAAACTGAAAGA-GCTTCG 740
| | ||||||||||||| |||||||| ||||||||||||||| | |||||||| | || |
Sbjct 358 TATGTGACAAAAGCCGGGTTTAAGTTAGATTGGTTGGAGAAGGACCTGAAAGATG-TTGG 416
Query 741 TGATACTCGGGTGCAACAACTTGAGCAAGATTTGAAGGACTTGAAGGAAAAGT 793
||| ||||| | ||| || ||||| |||| ||||| ||| | ||| ||||||
Sbjct 417 TGAGACTCGTATTCAAGAAATTGAGGAAGAGTTGAAAGACATAAAGCAAAAGT 469
> AT1G31370.1 | Symbols: | Ubiquitin-specific protease family
C19-related protein | chr1:11238298-11239363 REVERSE LENGTH=582
Length=582
Score = 414 bits (224), Expect = 6e-115
Identities = 353/415 (85%), Gaps = 10/415 (2%)
Strand=Plus/Plus
Query 307 AGCTGGGGCTACCCAGCAATGCTTCCCCTTACCAAACTTGTTGACGAAAATGATGGGTTT 366
||||| || | || | ||||||||||||||| | ||||| |||||| ||||| ||||||
Sbjct 169 AGCTGTGGTTTCCGATCAATGCTTCCCCTTAACGAACTTCTTGACGTAAATGGCGGGTTT 228
Query 367 CTGGTGAATGGAGAAGTCAAGGTTGTTGCCGAGGTTGGTGTTCTTGAAGTTGTTGGCAAA 426
|||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 229 ATGGTGAATGGAGAAGTCAAGATTGTTGCCGAGGTTGGTGTTCTTGAAGTTGTTCGCAAA 288
Query 427 TCAGATGTGTTAGTGGAAACTTTATTAGTTCA-GGAAAGCATCGATGTCAATGGGTTTCA 485
|||||||||||||||||||||| ||||| | | |||||||||||||||||||||||||||
Sbjct 289 TCAGATGTGTTAGTGGAAACTTCATTAG-TGATGGAAAGCATCGATGTCAATGGGTTTCA 347
Query 486 AGTTCTTCCTTCTCAGGTAGACTCTGTGAACAATCTCTTTAAAAATTACCCAGACATTGC 545
|||||||||||| |||||||| |||||||| | | | ||| |||| |||||||||||||
Sbjct 348 AGTTCTTCCTTCACAGGTAGAATCTGTGAAGAGTTTGTTTGAAAAGCACCCAGACATTGC 407
Query 546 ATCAAAATTCTGTCTGGAGAACCAACTTCTGAGAGCAACATACATGAATAGCCTACTATG 605
||| |||||| ||| |||||| || ||||||| |||||| | ||||||| |||||| |
Sbjct 408 ATCGAAATTCCGTCCAAAGAACCCACATCTGAGAACAACATCCTTGAATAGTCTACTAAG 467
Query 606 CTTGACTGAGATTCTGAG-C-C----AGTCCCCTGAGAAACTCTCTAGTGTTGATCTCGC 659
|||||||||||||||| | | | ||||||||||| ||||||| | || |||||| ||
Sbjct 468 CTTGACTGAGATTCTGTGTCACTGTCAGTCCCCTGAGGAACTCTCCATTGATGATCTTGC 527
Query 660 CAATGCACATTGTACACTA-TCTTCTCTGACAAAAGCCGGTTTTAAGTTGGATTG 713
||| || ||| ||||||| | || | |||||||||| || || |||||||||||
Sbjct 528 CAACGCGTATTCTACACTAAT-TTGTTTGACAAAAGCTGGGTTCAAGTTGGATTG 581
> AT3G27040.1 | Symbols: | Meprin and TRAF (MATH) homology domain-containing
protein | chr3:9974912-9977927 REVERSE LENGTH=1077
Length=1077
Score = 219 bits (118), Expect = 5e-56
Identities = 334/435 (77%), Gaps = 28/435 (6%)
Strand=Plus/Plus
Query 361 GGGTTTCTGGTGAATGGAGAAGTCAAGGTTGTTGCCGAGGTTGGTGTTCTTGAAGTTGTT 420
|||||||| || || |||||||||||| ||||||| || || | ||||||||||||| ||
Sbjct 619 GGGTTTCTCGTAAACGGAGAAGTCAAGATTGTTGCAGAAGTAGATGTTCTTGAAGTTATT 678
Query 421 GGCAAATCAGATGTGTTAGTGGAAACTTTATTAGTTCAGGAAAGCATCGATGTCAATGGG 480
|| ||| |||||| || || ||| || ||||| || ||| ||||||||
Sbjct 679 GGTGAATTAGATGTACCAGAGG-AAC----------CA-GAAAGAATTGATATCAATGGG 726
Query 481 TTTCAAGTTCTTCCTTCTCAGGTAGACTCTGTGAACAATCTCTTTAAAAATTACCCAGAC 540
|||||||| | | |||| |||||||| ||| |||||| ||| ||| |||| || | || |
Sbjct 727 TTTCAAGTCCCTGCTTCACAGGTAGAATCTATGAACAGTCTGTTTGAAAAGTATCGAGGC 786
Query 541 ATTGCATCAAAATTCTGTCTGGAGAACCAACTTCTGAGAGCAACA-TACATGAATAG-CC 598
||||||||||| ||| || ||||||||| ||||||| |||| | | || || |
Sbjct 787 TTTGCATCAAAAATCTTTCCCAAGAACCAACATCTGAGAAAAACATTTC-TGGAT-GTTG 844
Query 599 TACTATGCT-TGACTGAGATTCTGAGCCAGTCCCCTG-AGAAACTCTCTAGTGTTGATCT 656
||||| | | |||||||||||||| || ||| || | || |||| || |||| ||||||
Sbjct 845 TACTAAG-TATGACTGAGATTCTGTGCAAGTTTCCGGAAG-AACTTTCCAGTGGTGATCT 902
Query 657 CGCCA-ATGCACATTGTACACTATC--TTCTCTGACAAAAGCCGGTTTTAAGTTGGATTG 713
| || | ||| ||| | ||||| | || | | |||||||| || ||||||||||||||
Sbjct 903 -GGCAGAGGCATATTCTGCACTA-CGATT-TGTTACAAAAGCAGGGTTTAAGTTGGATTG 959
Query 714 GTTGGAGAAGAAACTGAAAGAG-CTTCGTGATACTCGGGTGCAACAACTTGAGCAAGATT 772
|||||||||||||||||||||| || || | | ||| ||||| || ||||| ||||||
Sbjct 960 GTTGGAGAAGAAACTGAAAGAGACTG-GTAAGAGTCGACTGCAAGAAATTGAGGAAGATT 1018
Query 773 TGAAGGACTTGAAGG 787
| |||||||||||||
Sbjct 1019 TAAAGGACTTGAAGG 1033
> AT2G05420.1 | Symbols: | TRAF-like family protein | chr2:1983901-1985341
FORWARD LENGTH=894
Length=894
Score = 182 bits (98), Expect = 6e-45
Identities = 529/726 (73%), Gaps = 73/726 (10%)
Strand=Plus/Plus
Query 43 AATTTCTCCACTTTGCAAT-CTAATGAATTTTATTCCGAT-AATTTCGTAGTTGGTGACT 100
||||||||| ||||||||| | || || || | || ||| || ||||| |||||||| |
Sbjct 46 AATTTCTCCTCTTTGCAATCCGCATCAA-TTCACTCTGATCAA-TTCGTGGTTGGTGATT 103
Query 101 CCAAATGGCGTCTTCTGGCCTATCCCAAGGGAAAT------G-GA--GA--TGG-TTTTA 148
||||||||||||| ||||||||||||||||||| | || | ||| || ||
Sbjct 104 GCAAATGGCGTCTTAAGGCCTATCCCAAGGGAAATGAAAAGGCGACTTATTTGGCTTATA 163
Query 149 ---ATAA-AAGTTTTTCTCTGT-TTCT-GGCTGTTGCTGATTCTGAATCTTTGCCTAATG 202
||| || ||| |||||| || | | |||||| || | ||||||| |||| ||
Sbjct 164 GGGCTAATAA-TTTGGCTCTGTATT-TAAAC-GTTGCTAATAGTAAATCTTTCCCTATTG 220
Query 203 GTTGGAAAAGACACATC-AAA-TATCGTCTAACTGTT-GTTAATCAAATGTCGGAGAAAC 259
| |||| |||||||| | ||| | || ||| ||| || || ||||||| || || ||||
Sbjct 221 GATGGACAAGACACA-CTAAATTTTC-TCTTACT-TTAGTAAATCAAAAATCAGAAAAAC 277
Query 260 TTTCTAAACAGGA-AGAATTACAATC-CTGGTTTGATCAGAATTCT-CTTAGCTGGGGCT 316
| || |||| | ||||| |||| | |||||||||||| || ||| | |||| |||| |
Sbjct 278 TCTCCAAAC-TAACAGAATCACAA-CACTGGTTTGATCATAAGTCTAC-TAGCCGGGGGT 334
Query 317 ACCCAGCAATGCTTCCCCTTACCAAACTTG-TTGACGAAAATGATGGG-TTTCTGGTGAA 374
||||| ||| |||| || || || | || | || ||||| ||| |||||||||||
Sbjct 335 TTCCAGCTATGATTCCTCTCACTAATC-TGCAT-AC--TAATGA-GGGATTTCTGGTGAA 389
Query 375 TGGAGAAGTCAAGGTTGTTGCCGAGGTTG-GTGTTCTTGAAGTTGTTGGCAAATCAGATG 433
||||||| ||| |||||||| |||| | | |||||||||||||| || |||| |||||
Sbjct 390 TGGAGAACTCACCCTTGTTGCCAAGGTAGAG-GTTCTTGAAGTTGTAGGAAAATTAGATG 448
Query 434 TGTTAGTGGAAA-CTTTATTAGTTCA-GGAAAGCATCGATGTCAATGGGTTTCAAGTTCT 491
| | | |||| ||| | || | | ||||| ||| |||||||||||||||||||||||
Sbjct 449 TATCA-AAGAAATCTTCACCAG-TAATGGAAACCATAGATGTCAATGGGTTTCAAGTTCT 506
Query 492 TCCTTCTCAGGTAGACTCTGTGAA-CAATCTCTTT-AAAAATTACCCAGACATTGCAT-C 548
| | |||| |||| || ||||| | | | ||| |||| ||| ||| ||||||| |
Sbjct 507 T-C--CTCAAATAGAATCGGTGAATC-GTTTGTTTGCAAAA-CACCTAGATATTGCATCC 561
Query 549 AAAATTCTGTCTGGAG-AACCAACT-TCTG-AGAGCAACATACATGAATAG-CCTACTAT 604
||| ||| ||| || |||| | | | || ||| | | ||||||||| | || |||
Sbjct 562 AAATTTC-GTCCAAAGAAACC-A-TATATGAAGA-CGGCGTACATGAAT-GTTCTCCTAA 616
Query 605 GCTTGACTGAGATTCTGAGCCAGTCCCCT-GAGAAACTCTCTAGTGTTGATCTCGCCAAT 663
|||| || ||| ||| |||| || ||| || | ||||| | || |||| | | |
Sbjct 617 GCTTAACCAAGACGCTGTGCCAATCGCCTCAAG-ATCTCTCCAATGATGATATATCTGGT 675
Query 664 GCACATTG-TACACT-ATCTTCTCTGACAAAAGCCGGTTTTAAGTTGGATTGGTTGGAGA 721
||| | | |||| | | | | ||| | |||| || ||||||||||||||||||||||
Sbjct 676 GCA-GGCGCTGCACTGA-CATATTTGAGAGAAGCAGGGTTTAAGTTGGATTGGTTGGAGA 733
Query 722 AGAAAC 727
||||||
Sbjct 734 AGAAAC 739
> AT2G01790.1 | Symbols: | TRAF-like family protein | chr2:341322-342480
REVERSE LENGTH=810
Length=810
Score = 176 bits (95), Expect = 3e-43
Identities = 327/434 (75%), Gaps = 35/434 (8%)
Strand=Plus/Plus
Query 361 GGGTTTCTGGTGAATGGAGAAGTCAAGGTTGTTGCCGAGGTTGGTGTTCTTGAAGTTGTT 420
|||||||| || || ||||||||| | ||||||| || || | |||| |||||||| ||
Sbjct 361 GGGTTTCTTGTAAACGGAGAAGTCGATATTGTTGCAGAAGTAGATGTTGTTGAAGTTATT 420
Query 421 GGCAAATCAGATGTGTTAGTGGAAACTTTATTAGTTCAGGAAAGCATCGAT-GTCAATGG 479
|| |||| |||||| | || || | | ||| |||||||| ||| | ||||||
Sbjct 421 GGTAAATTAGATGTATCAGAGG-------A--A--TCA-GAAAGCATTGATAG-CAATGG 467
Query 480 GTTTCAAGTTCTTCCTTCTCAGGTAGACTCTGTGAACAATCTCTTTAAAAATTACCCA-G 538
|||| | || ||| |||| || ||||| |||||||||| ||| ||| ||| |||||| |
Sbjct 468 GTTTGACGTCCTTGCTTCACAAGTAGAATCTGTGAACAGTCTGTTTGGAAAGTACCCATG 527
Query 539 ACATTGCATCAAAATTCTGTCTGGAGAACCAAC-TTCTGAGAGCAACATACATGAATAGC 597
||||||||||| |||||| ||| || || || | | || || | | ||| | |
Sbjct 528 -TTTTGCATCAAAACTCTGTCCCAAGACCCCACGTT-T-AAAG-AA-A-A-ATG--TTG- 577
Query 598 CTACTATGCT-TGACTGAGATTCTGAGCCAGTCCCCTGAGAAACTCTCTAGTGTTGATCT 656
||| | | | ||| |||||||||| || |||| || || ||||||||| || ||||||
Sbjct 578 -TACAAAG-TCTGAATGAGATTCTGTGCAAGTCTACTAAGGAACTCTCTAATGGTGATCT 635
Query 657 CGCCAATGCACATTGTACACTATC--TTCTCTGACAAAAGCCGGTTTTAAGTTGGATTGG 714
||| | ||| ||| | ||||| | || | | || ||||| || |||||||||||||||
Sbjct 636 GGCCGAGGCATATTCTGCACTA-CGATT-TGTTACGAAAGCAGGGTTTAAGTTGGATTGG 693
Query 715 TTGGAGAAGAAACTGAAAGAG-CTTCGTGATACTCGGGTGCAACAACTTGAGCAAGATTT 773
||||||||||||||||||||| || || | | ||| ||||| || ||||| |||||||
Sbjct 694 TTGGAGAAGAAACTGAAAGAGACTG-GTAAGAGTCGATTGCAAGAAATTGAGGAAGATTT 752
Query 774 GAAGGACTTGAAGG 787
|||||||||||||
Sbjct 753 AAAGGACTTGAAGG 766
> AT2G05410.1 | Symbols: | TRAF-like family protein | chr2:1976918-1978553
FORWARD LENGTH=1082
Length=1082
Score = 174 bits (94), Expect = 1e-42
Identities = 468/643 (73%), Gaps = 48/643 (7%)
Strand=Plus/Plus
Query 107 GGCGTCTTCTGGCCTATCCCAAGGGAAATGGAGATGGTTTTAATAAAAGTTTTTCTCTGT 166
||||| || ||||||| |||||||| ||| | | | | || | |||||||||||||
Sbjct 277 GGCGTATTATGGCCTACCCCAAGGG-AATTAACAAAG--CTCATGATAGTTTTTCTCTGT 333
Query 167 TTCT-GGCTGTTGCTGAT-TCTGAATCTTTGCCTAATGGTTGGAAAAGACACATC-AAA- 222
|||| | ||| ||||| | |||||||| |||| ||| ||| ||||||| | |||
Sbjct 334 TTCTAAAC-GTTCCTGATAAC-GAATCTTTACCTACTGGATGGCGAAGACAC-GCTAAAG 390
Query 223 TATCGTCTAACTGTT-GTTAATCAAATG-TCGGAGAAACTTTCTAAACAGGAAGAA-TTA 279
| || | | | | || || |||| || | || || ||||| ||| ||| ||| || | |
Sbjct 391 TTTC-TTTTAGT-TTAGTAAATC-AAGGTTCAGAAAAACTCTCTCAAC--GAA-AAGTGA 444
Query 280 C-AATC-CTGGTTTGATCAGAATTCTCTTAGCTGGGGCTACCCAGCAATGCTTCCCCTTA 337
| | | |||||||| ||| || || ||| |||||| | |||| |||| || ||| |
Sbjct 445 CTCAGCACTGGTTTGTTCAAAAGGCTTTTACCTGGGGGTTTCCAGTAATGATTACCCACA 504
Query 338 CCAAACTTGTTGACGAAAATGATGGGTTTCTGGTGAATGGAGAAGTCAAGGTTGTTGCCG 397
|| ||||| | | |||||| || |||||||| ||||||||| |||| ||||||||
Sbjct 505 CCGAACTTAACG-CCAAAATG--GGATTTCTGGTAAATGGAGAACTCAAAGTTGTTGCTA 561
Query 398 AGGTTG-GTGTTCTTGAAGTTGTTGGCAAATCAGATGTGTTAGTGGAAACTTTATTAGTT 456
|| | | | |||||||||||||| || |||| |||||| | | |||| ||| | | |
Sbjct 562 AGATAGAG-GTTCTTGAAGTTGTAGGGAAATTAGATGTATCAAAGGAATCTTCACCA-AT 619
Query 457 CA-GGAAAGCATCGATGTCAATGGGTTTCAAGTTCTTCCTTCTCAGGTAGACTCTGTGAA 515
| | ||| ||| ||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 620 AATGAAAACCATAGATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTAGATTCTGTGAA 679
Query 516 -CAATCTCTTT-AAAAATTACCCAGACATTGCATCAAAATT-CTGTCTGGAGAA-CCA-A 570
| | | ||| ||||| ||| ||| |||| ||||||||| | |||| | || ||| |
Sbjct 680 GCGTT-TGTTTGAAAAAA-ACCTAGATATTGTATCAAAATTTC-GTCTTAAAAATCCATA 736
Query 571 CTTCTGA-GAGCAACATACATGAATAGCCTACT-ATGCTTGACTGAGATTCTGAGCCAGT 628
|| ||| || | | | ||||||| ||| || | | || || || | ||| | || |
Sbjct 737 -TT-TGAAGA-CTGCGTGCATGAATCTCCTCCTGA-GTTTAACCGAAACGCTGTGTCAAT 792
Query 629 CCCCTGA-GAAACTCTCTAGTGTTGATCTCGCCAATGCACATTGTA-CACTATCTTCTCT 686
| ||| | ||| ||||| | || || |||| | ||||| | || |||| | | | |
Sbjct 793 CGCCTCAAGAA-CTCTCCAATGATGGTCTCTCTGATGCAGGT-GTTGCACTGGCATATTT 850
Query 687 GACA-AAAGCCGGTTTTAAGTTGGATTGGTTGGAGAAGAAACT 728
|| | ||| | || ||||||||||||||||||||||||||||
Sbjct 851 GATAGAAA-CAGGGCTTAAGTTGGATTGGTTGGAGAAGAAACT 892
> AT3G58370.1 | Symbols: | TRAF-like family protein | chr3:21595774-21596538
REVERSE LENGTH=660
Length=660
Score = 106 bits (57), Expect = 4e-22
Identities = 88/103 (85%), Gaps = 2/103 (2%)
Strand=Plus/Plus
Query 458 AGGAAAGCATCGATGTCAATGGGTTTCAAGTTCTTCCTTCTCAGGTAGACTCTGTGAACA 517
|||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 212 AGGAAAGCATTGATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGAAGT 271
Query 518 ATCTCTTTAAAA-ATTACCCAGACATTGCATCAAAATTCTGTC 559
| | ||| ||| | | |||||| |||||||||||||| |||
Sbjct 272 GTATATTTGAAAGAC-ATCCAGACTTTGCATCAAAATTCCGTC 313
> AT3G58380.1 | Symbols: | TRAF-like family protein | chr3:21597799-21599568
REVERSE LENGTH=1236
Length=1236
Score = 93.5 bits (50), Expect = 3e-18
Identities = 78/91 (86%), Gaps = 4/91 (4%)
Strand=Plus/Plus
Query 461 AAAGCATCGATGTCAATGGGTTTCAAGTTCTTCCTTCTCAGGTAGACTCTGTGAA-CAAT 519
||| ||| ||||||||||||||||||||||||||||| |||||||| |||||||| | |
Sbjct 616 AAATCATTGATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGAAGCG-T 674
Query 520 CTCTTTAAAA-ATTACCCAGACATTGCATCA 549
| ||| ||| || ||||| |||||||||||
Sbjct 675 ATATTTGAAATAT-ACCCAAACATTGCATCA 704
> AT3G29580.1 | Symbols: | Arabidopsis phospholipase-like protein
(PEARLI 4) with TRAF-like domain | chr3:11394675-11395871
REVERSE LENGTH=921
Length=921
Score = 84.2 bits (45), Expect = 2e-15
Identities = 210/286 (73%), Gaps = 26/286 (9%)
Strand=Plus/Plus
Query 459 GGAAAGCATCGATGTCAATGGGTTTCAAGTTCTTCCTTCTCAGGTAGACTCTGTGAA-CA 517
||||||||| | ||| ||||||||||| ||||||||||| ||||| || | |||||| |
Sbjct 516 GGAAAGCATTGTTGTTAATGGGTTTCATGTTCTTCCTTCACAGGTGGAATTTGTGAAGC- 574
Query 518 ATCTCTTT-AAAAATTACCCAGACATTGC-ATCAAAATTCTGTCTGGA-GAACC-AACTT 573
| | ||| ||||| | ||||| |||| | | ||| ||| | ||||| | ||
Sbjct 575 GTATTTTTGAAAAA-CATCCAGATGTTGCAAAGGAGTTTC-GTC-CAACGAACCGGA-TT 630
Query 574 CTG-AGAGCAACATACATGAATAG-CCTACT-ATGCTTGACTGAGA-TTCTGAGCCAGTC 629
|| ||| || | || |||||| | ||||| | | |||| ||||| || || |||||||
Sbjct 631 GTGAAGA-CAGCGTATATGAAT-GTTCTACTCA-GTTTGATTGAGACTT-TGCGCCAGTC 686
Query 630 CCCT-GAGAAACTCTCT-AGTGTTGATCTCGCCAATGCACATTGTACACTATCTTCTC-T 686
||| |||||| ||||| || |||||| | |||| | || |||| || | |
Sbjct 687 GCCTAGAGAAA-TCTCTAAG-AATGATCTGGATGGTGCATGTGGTTTACTAAGATC-CAT 743
Query 687 GACAA-AAGCCGGTTTTAAGTTGGATTGGTTGGAGAAGAAACTGAA 731
|| || | || || ||||||||||||||||||||||||||||||||
Sbjct 744 GA-AAGAGGCTGGATTTAAGTTGGATTGGTTGGAGAAGAAACTGAA 788
> AT3G44800.1 | Symbols: | Meprin and TRAF (MATH) homology domain-containing
protein | chr3:16343333-16346027 FORWARD LENGTH=1695
Length=1695
Score = 65.8 bits (35), Expect = 7e-10
Identities = 43/47 (91%), Gaps = 0/47 (0%)
Strand=Plus/Plus
Query 469 GATGTCAATGGGTTTCAAGTTCTTCCTTCTCAGGTAGACTCTGTGAA 515
||||||||||||||||||||||||||||| |||| || ||||||||
Sbjct 523 GATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGCGGAATCTGTGAA 569
> AT3G58240.1 | Symbols: | TRAF-like superfamily protein | chr3:21568530-21569827
REVERSE LENGTH=954
Length=954
Score = 54.7 bits (29), Expect = 1e-06
Identities = 29/29 (100%), Gaps = 0/29 (0%)
Strand=Plus/Plus
Query 700 TTTAAGTTGGATTGGTTGGAGAAGAAACT 728
|||||||||||||||||||||||||||||
Sbjct 757 TTTAAGTTGGATTGGTTGGAGAAGAAACT 785
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 41392937128
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5