BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg336890 Length=606 Score E Sequences producing significant alignments: (Bits) Value AT5G11000.1 | Symbols: | Plant protein of unknown function (DU... 135 4e-31 > AT5G11000.1 | Symbols: | Plant protein of unknown function (DUF868) | chr5:3479029-3480425 REVERSE LENGTH=1397 Length=1397 Score = 135 bits (73), Expect = 4e-31 Identities = 90/98 (92%), Gaps = 1/98 (1%) Strand=Plus/Plus Query 10 GATTCAGTCAAAGAAGCTTACGCTCGTGCTAAATCGGCGAAATCTCCGACGAATCCACAA 69 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| Sbjct 538 GATTCAGTCAAAGAAGCTTACGCTCGTGCTAAATCGGCGAAACCTCCGACGAATCCGCAA 597 Query 70 GCTTTGTTTATTGAGGAAAGATCATGTGTTTGGAGCTA 107 ||| | | | ||||||||||| || ||||||||||||| Sbjct 598 GCTCT-TCTGTTGAGGAAAGAGCACGTGTTTGGAGCTA 634 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 29186039407 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5