BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg336969
Length=3780
Score E
Sequences producing significant alignments: (Bits) Value
AT1G48490.1 | Symbols: | Protein kinase superfamily protein | ... 5073 0.0
AT3G17850.1 | Symbols: | Protein kinase superfamily protein | ... 2630 0.0
> AT1G48490.1 | Symbols: | Protein kinase superfamily protein
| chr1:17921979-17928930 REVERSE LENGTH=4238
Length=4238
Score = 5073 bits (2747), Expect = 0.0
Identities = 2971/3081 (96%), Gaps = 8/3081 (0%)
Strand=Plus/Plus
Query 608 GTCAATTTAAGGTATCACCTAGCATATCTGGCCCTGTAGGAAGCTCAGAAGTTTGCAC-C 666
||||||| ||||||||||||| |||||||||||||| ||||||| ||||||||||||| |
Sbjct 793 GTCAATTCAAGGTATCACCTACCATATCTGGCCCTGAAGGAAGCGCAGAAGTTTGCACAC 852
Query 667 CTAGAGAATTCATATGAATTGGAAGATCCAAAAGAGTCAGAATCGCCTCGTTATCAAGCT 726
| |||||||||||| || ||||| ||||||||||||||||| ||||||||||||||||||
Sbjct 853 C-AGAGAATTCATACGATTTGGATGATCCAAAAGAGTCAGACTCGCCTCGTTATCAAGCT 911
Query 727 TTACTTCGTATGACCAGTGCTCCAAGAAAGAGGTTTCCTGGTGACATCAAGAGCTTTTCT 786
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 912 TTACTTCGTATGACCAGTGCTCCAAGAAAGAGGTTTCCTGGTGATATCAAGAGCTTTTCT 971
Query 787 CATGAGCTGAACTCGAAAGGGGTTCGGCCTTTTCCATTATGGAAGCCTCGTAGGTCAAAT 846
|||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct 972 CATGAGCTGAACTCGAAAGGTGTTCGGCCTTTTCCATTATGGAAGCCTCGTAGGTTAAAT 1031
Query 847 AACTTGGAGGAAATCTTGAATCTAATTCGAACCAAATTTGATAAAGCAAAGGAAGAAGTA 906
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1032 AACTTGGAGGATATCTTGAATCTAATTCGAACCAAGTTTGATAAAGCAAAGGAAGAAGTA 1091
Query 907 AATTCGGACCTTTTTGCATTTAGTGGGGATCTGTTGGATATTTATGATAAAAACAAAGAA 966
||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct 1092 AATTCGGACCTTTTTGCATTTGGTGGGGACCTGTTGGATATTTATGATAAAAACAAAGAA 1151
Query 967 AGTCATCCTGAGTTGCTGGAAACAATTGAAGACTTGTTGGTTTTGGCAGAGACTTGTGCT 1026
||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||
Sbjct 1152 AGTCATCCTGAGTTGCTGGTTACAATTGAAGACTTGTTGGTTTTGGCAAAAACTTGTGCT 1211
Query 1027 AAGACTACTTCGGGAGAGTTCTGGCTTCAGTGTGAGGGCATAGTACAAGACTTAGATGAT 1086
||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1212 AAGACTACTTCAAAAGAGTTCTGGCTTCAGTGTGAGGGCATAGTGCAAGACTTAGATGAT 1271
Query 1087 AGACGTCAAGAGCTTCCTCCGGGCGTGCTCAAGCAACTTCACACTCGGATGCTTTTTATC 1146
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1272 AGACGTCAAGAGCTTCCTCCGGGCGTGCTCAAGCAGCTTCACACTCGGATGCTTTTTATC 1331
Query 1147 CTTACCAGATGTACCAGATTACTTCAGTTTCATAAGGAAAGTTGGGGGCAGGAGGAAGAT 1206
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1332 CTTACCAGATGTACCAGATTACTTCAATTTCATAAGGAAAGTTGGGGGCAGGAGGAAGAT 1391
Query 1207 GCCT-TACAACTACGTCAGTCAAGAGTCTTGCATTCTGCCGATAAAAGAGTCCCCACTGG 1265
| || ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct 1392 G-CTGTACAACTACGTCAGTCAGGAGTCTTGCATTCTGCCGATAAAAGAGACCCCACTGG 1450
Query 1266 AGAAGTTAGGGACGGG-AGCGGTTCAAGTACTGCTAATGCCTCAAAGGCACCATCCACCA 1324
|||||||||||||||| || |||||||||||||| ||||||| ||||| |||||||||||
Sbjct 1451 AGAAGTTAGGGACGGGAAG-GGTTCAAGTACTGCCAATGCCTTAAAGGTACCATCCACCA 1509
Query 1325 AGAAAGCTTATAGTCAGGAGCAGCGTGGTTTGAATTGGAACGAGGGCTTTGTTGTTCGTC 1384
||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct 1510 AGAAAGCTTATAGTCAGGAGCAGCGTGGTTTGAATTGGATCGAGGGCTTTTTTGTTCGTC 1569
Query 1385 CAGCTCCTCTCTCTTCTCCGTACAAAGAAATGTCAAAGGATTCTGAATCGCCTGCAAACA 1444
||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct 1570 CAGCTCCTCTCTCTTCTCCGTACAATGAAACGTCAAAGGATTCTGAATCGCCTGCAAACA 1629
Query 1445 TCGATAAAATGTCTTCTTGGAAAAGACTTCCATCTCCGGCATCGAAGGGTGTACAAGAAG 1504
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1630 TCGATAAAATGTCTTCTTGGAAAAGACTTCCATCTCCAGCATCGAAGGGTGTACAAGAAG 1689
Query 1505 CTGCAGTATCTAAAGAGCAGAATGATAGCAAAGTTGAACCTCCACAGGTAGTTAAAAAGC 1564
|||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct 1690 CTGCAGTATCGAAAGAGCAGAATGATCGCAAAGTTGAACCTCCACAGGTCGTTAAAAAGC 1749
Query 1565 TAGTAGCTATAAGTGATGATATGGCTGTTGCGAAGTTGCCAGACGTTTCTTCCGCAAAAT 1624
||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 1750 TAGTAGCTATAAGTGATGATATGGCTGTTGCTAAGTTGCCAGAAGTTTCTTCCGCAAAAG 1809
Query 1625 TGTCCCAGGAACATATGCCCAAGAATCGGCACAATATTTCTTGGGGTTATTGGGGGGATC 1684
|||||||||||||||| ||||||||||||| |||||||| ||||||||||||||| |||
Sbjct 1810 CGTCCCAGGAACATATGTCCAAGAATCGGCATAATATTTCGTGGGGTTATTGGGGGCATC 1869
Query 1685 AGTCATGTATCTCTGAGGAAAGTTCAATTATTTGCCGTATATGCGAGGAGGAAATTCCCA 1744
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1870 AGTCATGTATTTCTGAGGAAAGTTCAATTATTTGCCGTATATGCGAGGAGGAAATTCCCA 1929
Query 1745 CCACCCATGTGGAAGATCACTCTAGAATTTGTGCATTGGCTGATAAATATGACCAAAAGG 1804
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1930 CCACCCATGTGGAAGATCACTCTAGAATCTGTGCATTGGCTGATAAATATGACCAAAAGG 1989
Query 1805 GTGTGAGTGTTGACGAGCGGCTGGTGGCAGTTGCTGTAACTCTTGAAAAGATAACAGAGA 1864
||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||| |
Sbjct 1990 GTGTGGGTGTTGACGAGCGGCTGATGGCAGTTGCAGTAACTCTTGAAAAGATAACAGACA 2049
Query 1865 ACT-TCATACAAAAGGATAGCCTAGCAGCAGTAGAAAGCCCAGATGGTATGAAAATATCT 1923
| | ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 2050 A-TGTCATACAAAAGGATAGCCTAGCAGCGGTAGAAAGCCCAGAAGGTATGAAAATATCT 2108
Query 1924 AACGCGAGCTTGACCGAAGAACTTGATGTTCTCTCCCCAAAGCTAAGTGATTGGTCGCGA 1983
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2109 AACGCGAGTTTGACCGAAGAACTTGATGTTCTCTCCCCAAAGCTAAGTGATTGGTCGCGA 2168
Query 1984 AGAGGGTCGGAGGACATGCTTGACTGTTTTCCGGAGGCTGATAATTCAGTTTTCATGGAT 2043
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2169 AGAGGGTCGGAGGACATGCTTGACTGTTTTCCGGAGACTGATAATTCAGTTTTCATGGAT 2228
Query 2044 GATATGAGATGTTTACCTTCAATGTCATGCAGAACTCGTTTTGGTCCCAAGTCTGATCAA 2103
|||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2229 GATATGGGATGCTTACCTTCAATGTCATGCAGAACTCGTTTTGGTCCCAAGTCTGATCAA 2288
Query 2104 GGCATGACTACTTCATCTGCCGGTAGCATGACTCCTAGATCCCCTATTCCAACCCCTAGA 2163
|||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2289 GGCATGGCTACTTCATCTGCCGGTAGCATGACTCCTAGGTCCCCTATTCCAACCCCTAGA 2348
Query 2164 CCCGATCCAGTTGAATTGTTATTAGGAGGCAAGGGTACATTCCATGACCAGGATGATTTC 2223
||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2349 CCCGATCCAATTGAATTGTTATTAGAAGGCAAGGGTACATTCCATGACCAGGATGATTTC 2408
Query 2224 TCTCAGATGAGTGAACTTGCTGACATTGCAAGATGCGCAGCAAATCCCATTCCAGTTGAT 2283
|||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct 2409 CCTCAGATGAGTGAACTTGCTGACATTGCAAGATGCGCAGCAAATGCCATTCCTGTTGAT 2468
Query 2284 GATCAATCTATTCAGCTTTTACTTTCTTGTCTTGAAGACTTGAGAGTTGTCATTGACCGC 2343
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2469 GATCAATCTATTCAGCTTTTACTTTCCTGTCTTGAAGACTTGAGAGTTGTCATTGACCGC 2528
Query 2344 AGAAAGTTTGATGCACTTATAGTAGAAACTTTTGGAACACGCATAGAAAAGTTGATACAG 2403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2529 AGAAAGTTTGATGCACTTATAGTAGAAACTTTTGGAACACGCATAGAAAAGTTGATACAG 2588
Query 2404 GAAAAGTATCTTCAGCTGTGCGAGCTTATGGATGATGAAAAAGGTACCATGATTGATGAA 2463
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2589 GAAAAGTATCTTCAGCTGTGCGAGCTTATGGATGATGAAAAAGGTACCATAATTGATGAA 2648
Query 2464 GATGCTCCTTTGGAAGATGATGTTGTTCGCAGCTTGAGGACCAGTCCAGTACATCTGCGG 2523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2649 GATGCTCCTTTGGAAGATGATGTTGTTCGCAGCTTGAGGACCAGTCCAGTACATCTGCGG 2708
Query 2524 GACCGCATATCCATAGATGATTTTGAGCTCAGGGAGACAATTAGTAGGGGAGCTTTTGGG 2583
||||||||||||||||||||||||||| ||| | || |||||||||||||||||||||||
Sbjct 2709 GACCGCATATCCATAGATGATTTTGAGGTCATGAAGTCAATTAGTAGGGGAGCTTTTGGG 2768
Query 2584 CATGTTATCTTGGCTCGTAAGAACACTACAGGAGACCTATTTGCAATTAAGGTTCTGAGG 2643
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2769 CATGTTATTTTGGCTCGTAAGAACACTACAGGAGACCTATTTGCAATTAAGGTTCTGAGG 2828
Query 2644 AAGGCAGATATGATCCGCAAGAATGCTGTGGAAAGTATACTTGCTGAACGAGATATTTTG 2703
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2829 AAGGCAGATATGATCCGCAAGAATGCTGTGGAAAGTATACTTGCCGAACGAGATATTTTG 2888
Query 2704 ATCAACGCCCGCAATCCCTTTGTGGTTCGATTCTTCTATTCTTTTACTTGTAGCGAAAAC 2763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2889 ATCAACGCCCGCAATCCCTTTGTGGTTCGATTCTTCTATTCTTTTACTTGTAGCGAAAAC 2948
Query 2764 CTGTATCTTGTGATGGAATACCTCAATGGAGGGGATTTTTATTCAATGTTGAGAAAATTA 2823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2949 CTGTATCTTGTGATGGAATACCTCAATGGAGGGGATTTTTATTCAATGTTGAGAAAAATA 3008
Query 2824 GGTTGCTTGGATGAAACTAATGCCCGTGTATACATTGCAGAAGTTGTCCTTGCTTTGGAA 2883
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3009 GGTTGCTTGGATGAAGCTAATGCCCGTGTATACATTGCAGAAGTTGTCCTTGCTTTGGAA 3068
Query 2884 TATTTACACTCTGAGGGTGTTGTGCATCGTGATTTGAAGCCTGACAATTTGTTGATTGCA 2943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3069 TATTTACACTCTGAGGGTGTTGTGCATCGTGATTTGAAGCCTGACAATTTGTTGATTGCA 3128
Query 2944 CATGATGGTCATGTTAAGTTGACAGATTTTGGGCTTTCAAAAGTTGGTCTCATCAACAGC 3003
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct 3129 CATGATGGTCATGTTAAGTTGACGGATTTTGGGCTTTCAAAAGTTGGTCTCATCAACAAC 3188
Query 3004 ACCGATGATCTCTCTGGTCCAGTTTCCAGTGCAGTGTCGCTGCTTGTTGAGGAGAAACCA 3063
|| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 3189 ACTGATGATCTCTCTGGTCCAGTTTCCAGTGCAACGTCGCTGCTTGTTGAGGAGAAACCA 3248
Query 3064 AAATTGCCGACATTGGGGCATAAGCGGTCTGCAGTGGGCACTCCTGACTACTTAGCGCCA 3123
|||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct 3249 AAATTGCCAACATTGGACCATAAGCGGTCTGCGGTGGGCACTCCTGACTACTTAGCGCCA 3308
Query 3124 GAAATTCTTTTGGGGACAGGACATGGTGCAACTGCGGATTGGTGGTCTGTTGGCATCATT 3183
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3309 GAAATCCTTTTGGGGACAGGACATGGTGCAACTGCGGATTGGTGGTCTGTTGGCATCATT 3368
Query 3184 TTGTATGAATTCATTGTGGGGATTCCGCCCTTCAATGCTGACCATCCTCAGCAAATCTTT 3243
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3369 TTGTACGAATTCCTTGTGGGGATTCCGCCCTTCAATGCTGACCATCCTCAGCAAATCTTT 3428
Query 3244 GACAATATTCTCAACCGAAATATACAATGGCCTCCTGTTCCTGAAGATATGAGCCATGAA 3303
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 3429 GACAATATTCTCAACCGTAATATACAATGGCCTCCTGTTCCTGAAGATATGAGCCATGAA 3488
Query 3304 GCCCGTGATTTGATAGATCGGTTATTAACAGAAGATCCCCATCAGAGACTTGGAGCTAGA 3363
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 3489 GCCCGTGATTTGATAGATCGGTTATTAACGGAAGATCCCCATCAGAGACTTGGAGCTAGA 3548
Query 3364 GGGGCGGCTGAGGTCAAGCAGCACATCTTCTTTAAAGACATAAACTGGAACACTCTAGCA 3423
||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct 3549 GGGGCGGCTGAGGTCAAGCAGCACAGCTTCTTTAAAGACATAGACTGGAACACTCTAGCA 3608
Query 3424 CAACAGAAGGCTGCATTTGTGCCGGATTCAGAAAATGCTTTTGACACAAGTTACTTCCAG 3483
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 3609 CAACAGAAGGCTGCATTTGTGCCGGACTCAGAAAATGCTTTTGACACAAGTTACTTCCAG 3668
Query 3484 AGTCGCTACTCGTGGAACTATTCGGATGAGCAATGTTTTCCTCCCAATGAGAATGAAGAT 3543
||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||
Sbjct 3669 AGTCGCTACTCGTGGAACTATTCGGGTGAGCGATGTTTTCCAACCAATGAGAATGAAGAT 3728
Query 3544 TGTAGTGACGGTGACAGCTTGAGTGGCAGTAGTGGTCGCTTAAGCAATCATCACGACGAG 3603
| |||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct 3729 TCTAGTGAAGGTGACAGCTTGTGTGGCAGTAGTGGTCGCTTGAGCAATCATCACGACGAG 3788
Query 3604 GGGGTTGATATACCCCGTGGACCTGCGGAGTTCGAAACTAGTGTCTCTGAAAATTACCCA 3663
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct 3789 GGGGTTGATATACCCTGCGGACCTGCGGAGTTCGAAACTAGTGTCTCTGAAAATTACCCA 3848
Query 3664 TTCGATAATTTCTCGTTCAAG 3684
|||||||||||||||||||||
Sbjct 3849 TTCGATAATTTCTCGTTCAAG 3869
Score = 693 bits (375), Expect = 0.0
Identities = 456/495 (92%), Gaps = 5/495 (1%)
Strand=Plus/Plus
Query 1 ATGGTGTTCAAGAGCAAACTCTTCTTCTCCTCGAAGAAATCGGGATCTTCTAGTCCCAAT 60
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct 249 ATGGTGTTCAAGAGCAAACTCTTCTTCTCCTCGAAGAAATCGAGATCTTCTAGTCCCAGT 308
Query 61 AGCAATAACAGTCCACGATCTGTTGGCTCTAATTCTCCGAGTGGATCCGATAAGAAGAAA 120
|||| ||||||||||||||||||||||| ||||||||| | |||||||||||||||||
Sbjct 309 AGCAGCAACAGTCCACGATCTGTTGGCTCCGATTCTCCGATTCGATCCGATAAGAAGAAA 368
Query 121 CCGAAATCAAATTCCAAAGAGGAAACTCGGAGCCCTAATACGAAGAAGGATGGT-TCATC 179
|||||||||||||| ||||||||||||||||||||||||||||||||| || || ||| |
Sbjct 369 CCGAAATCAAATTCTAAAGAGGAAACTCGGAGCCCTAATACGAAGAAGCAT-GTCTCAGC 427
Query 180 AAAGGGTAAAGAAGCTTCGTTCGAAGTTCAGTCTTCTAGTCCCGGGAAATCGAACTTGTC 239
|||||||||||||||||||| |||||||| ||||||||||| || ||||| |||| |||
Sbjct 428 GAAGGGTAAAGAAGCTTCGTTAGAAGTTCACTCTTCTAGTCCAGGCAAATCAAACTCGTC 487
Query 240 ATCTTCTGGTTCTGAGGTGAAGAAACCAATTGTTGAAACGCCAGCGCCGTCTAACGTGAA 299
|||||||||||| |||| ||||||||||||| ||||||||| ||| | ||| |||||||
Sbjct 488 ATCTTCTGGTTCCGAGGCGAAGAAACCAATTACTGAAACGCCGGCGACTTCTGACGTGAA 547
Query 300 GGAGGAAT---CGGCGTCGGTTTCGCCTATTATGGCTTCATCTTTGGGTTTGAATAGAAT 356
|||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 548 GGAGGAATCGCCGGCGTCGGTTTCGCCTATCATGGCTTCATCTTTGGGTTTGAATAGAAT 607
Query 357 CAAGACGAGGTCTGGTCCGTTACCGCAGGAAACTTTTTTCGGTTTTGAGAATGATAATGC 416
||||||||||||||| ||||| |||||||||| ||||||| |||||||||||||| ||||
Sbjct 608 CAAGACGAGGTCTGGCCCGTTGCCGCAGGAAAGTTTTTTCAGTTTTGAGAATGATTATGC 667
Query 417 AATTCCGGTCTTACCGTGTTACAAGTTGTCGAAGTTGGATACTGGCAAGAAGGAAGCTGG 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 668 AATTCCGGTCTTACCGTGTTACAAGTTGTCGAAGTTGGATACTGGCAAGAAGGAAGCTGG 727
Query 477 AAGTAGCAAGCTAGA 491
||| |||||| ||||
Sbjct 728 AAGCAGCAAGGTAGA 742
> AT3G17850.1 | Symbols: | Protein kinase superfamily protein
| chr3:6109705-6116458 REVERSE LENGTH=4253
Length=4253
Score = 2630 bits (1424), Expect = 0.0
Identities = 2536/3054 (83%), Gaps = 151/3054 (5%)
Strand=Plus/Plus
Query 634 TCTGGCCCTGTAGGAAGCTCAGAAGTTTGCACCCTAGAGAATTCATATGAATTGGAAGAT 693
||||||||| || ||| ||||| ||||||||| ||||||||||||||||| |||| ||
Sbjct 955 TCTGGCCCTCTAAGAAATTCAGACTTTTGCACCCCAGAGAATTCATATGAATGGGAAAAT 1014
Query 694 CCAAAAGAGTCAGAATCGCCTCGTTATCAAGCTTTACTTCGTATGACCAGTGCTCCAAGA 753
|| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct 1015 CCCAAAGAGTCAGAATCGCCTCGTTATCAAGCCTTACTTCGTATGACCAGTGCTCCACGA 1074
Query 754 AAGAGGTTTCCTGGTGACATCAAGAGCTTTTCTCATGAGCTGAACTCGAAAGGGGTTCGG 813
||||||||||||||||||||||| ||||||||||||||| ||||||| ||||| || ||
Sbjct 1075 AAGAGGTTTCCTGGTGACATCAAAAGCTTTTCTCATGAGTTGAACTCAAAAGGTGTACGT 1134
Query 814 CCTTTTCCATTATGGAAGCCTCGTAGGTCAAATAACT-TGGAGGAAATCTTGAATCTAAT 872
|| |||||||||||||||||||||||||| || || | |||||||| | |||||||| ||
Sbjct 1135 CCCTTTCCATTATGGAAGCCTCGTAGGTCGAACAA-TGTGGAGGAAGTATTGAATCTGAT 1193
Query 873 TCGAACCAAATTTGATAAAGCAAAGGAAGAAGTAAATTCGGACCTTTTTGCATTTAG-TG 931
||| | |||||||| |||||||||||||||||||| || |||||| | |||| | |
Sbjct 1194 TCGGGCAAAATTTGAGAAAGCAAAGGAAGAAGTAAACTCTGACCTTGCAGTATTT-GCAG 1252
Query 932 GGGATCT-GTTGGATATT-TATGATAAAAACAAAGAAAGTCATCCTGAGTTGCTGGAAAC 989
||| || || ||| || | ||| ||||| |||||| |||||||||| | ||||||
Sbjct 1253 CGGACCTGGTGGGA-GTTCT-TGAGAAAAATGCAGAAAGCCATCCTGAGTGGGAGGAAAC 1310
Query 990 AATTGAAGACTTGTTGGTTTTGGC-AGAGACTTGTGCTAAGACTACTTCGGGAGAGTTCT 1048
| ||||||||||| | ||||||| || | |||||||| ||||||| | ||||| ||||
Sbjct 1311 ATTTGAAGACTTGCTAATTTTGGCTCGA-AGTTGTGCTATGACTACTCCTGGAGATTTCT 1369
Query 1049 GGCTTCAGTGTGAGGGCATAGTACAAGACTTAGATGATAGACGTCAAGAGCTTCCTCCGG 1108
||||||||||||| ||||| || || ||||||||||||||||||||||||||||| ||||
Sbjct 1370 GGCTTCAGTGTGAAGGCATTGTTCAGGACTTAGATGATAGACGTCAAGAGCTTCCCCCGG 1429
Query 1109 GCGTGCTCAAGCAACTTCACACTCGGATGCTTTTTATCCTTACCAGATGTACCAGATTAC 1168
|||| |||||||| ||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct 1430 GCGTCCTCAAGCAGCTTCATACTCGGATGCTTTTTATCCTTACCAGATGTACTAGATTAC 1489
Query 1169 TTCAGTTTCATAAGGAAAGTTGGGGGCAGGAGGAAGATGCCT-TACAACTACGTCAGTCA 1227
||||||||||||||||||| |||||| |||||||| | | | |||||||||||||||||
Sbjct 1490 TTCAGTTTCATAAGGAAAGCTGGGGGGAGGAGGAACAAG-TTGTACAACTACGTCAGTCA 1548
Query 1228 AGAGTCTTGCATTCTGCCGATAAAAGAGTCCCCACTGGAGAAGTTAGGGA-CGGGAGCGG 1286
||||||||||||||| || |||| | || | | | || | ||| ||||| ||
Sbjct 1549 AGAGTCTTGCATTCTATAGAGAAAATA--CCGC-C----G-AG-T--GGAGCGGGA-AGG 1596
Query 1287 TTCAAGTACTGCTAATGCCT-CAAAGGCACCATCCACCAAGAAAGCTTATAGTCAGGAGC 1345
||| | | | || || |||||| |||||| |||||||||||||||||||||||||
Sbjct 1597 ----AGT--TAC-AGTG-CTGCAAAGGTACCATCTACCAAGAAAGCTTATAGTCAGGAGC 1648
Query 1346 AGCGTGGTTTGAATTGGAACGAGGGCTTTGTTGTTCGTC-CAGCTCCTCTCTCTT-CTCC 1403
||| ||||||| | ||||| || | | |||||| || | ||| ||| | ||||| ||||
Sbjct 1649 AGCATGGTTTGGACTGGAAGGAAGACGCTGTTGTACG-CTCAGTTCC-CCCTCTTGCTCC 1706
Query 1404 GTAC--AAAGA-AATG-T-CAAAGGATTCTGAATCGCCTGCAAACATCGATAAAATGTCT 1458
| | ||| | ||| | |||||| |||||||| ||||||||||| |||| |||||||
Sbjct 1707 -TCCTGAAA-ATTATGCTATAAAGGAATCTGAATCTCCTGCAAACATTGATAGAATGTCT 1764
Query 1459 TCTTGGAAAAGACTTCCATCTCCGGCATC-GAAGGGTGT-ACAAGAAGCTG-CAGTATCT 1515
|| ||||||| |||||||||||| ||| | ||| ||| | ||||||| | ||| ||
Sbjct 1765 TCCTGGAAAAAACTTCCATCTCCAGCA-CTGAAAACTGTGA-AAGAAGC-GCCAGCGTC- 1820
Query 1516 A-AAGAGCAGAATGATAGCAAAGTTGAACCTCCACAGGTAGTTAAAAAGCTAGTAGCTA- 1573
| |||||||||||||||||||||||||||||||| | ||||| || | | | | |
Sbjct 1821 AGAAGAGCAGAATGATAGCAAAGTTGAACCTCCAAATATAGTT-GGGAG-TCG-A-CAAG 1876
Query 1574 -TAAGTGATGATATGGCTGTTGCGAAGTTGC-CAGACGTTTCTTCC-GCAAAA-TTGTCC 1629
| || |||||| |||||||| | || | || || |||| ||| |||||| | ||
Sbjct 1877 GT-AGGGATGATGCCGCTGTTGC-TA-TT-CTCA-AC-TTTCCTCCAGCAAAAGAT-TCT 1929
Query 1630 CAGGAACATATGC-CCAAGAATCGGCACAATATTTCTTGGGGTTATTGGGGGGATC-AGT 1687
|| ||||| | | ||||| ||||||||||||||||||||||||| |||||||| | |
Sbjct 1930 CATGAACA-CTCCTCCAAGCATCGGCACAATATTTCTTGGGGTTACTGGGGGGAACAACC 1988
Query 1688 CATGTATCTCTGAGGAAAGTTCAATTATTTGCCGTATATGCGAGGAGGAAATTCCCACCA 1747
| | ||| || |||||||||||||| || |||||||| || ||||||||| |||| || |
Sbjct 1989 CCT-TATTTCGGAGGAAAGTTCAATAATGTGCCGTATCTGTGAGGAGGAAGTTCCGACAA 2047
Query 1748 CCCATGTGGAAGATCACTCTAGAATTTGTGCATTGGCTGATAAATATGACCA-AAAGGGT 1806
| |||||||||||||||||||| ||||| |||||||||||||||||||||| ||| ||
Sbjct 2048 CTCATGTGGAAGATCACTCTAGGGTTTGTACATTGGCTGATAAATATGACCAGAAA-GGA 2106
Query 1807 GTGAGTGTTGACGAGCGGCTGGTGGCAGTTGCT-GTAACTCTTGAAAAGATAACAGAGAA 1865
|||||||||| ||||| ||| ||||||||||| || || ||||| |||||| ||||||
Sbjct 2107 CTGAGTGTTGATGAGCGACTGATGGCAGTTGCTGGT-ACACTTGACAAGATAGCAGAGAC 2165
Query 1866 CTTCATACAAAAGGATAGCCTAGCAGCAGTAGAAAGCCCAGATGGTATGAAAATATCTAA 1925
||||| || ||||||||||||||||| | ||| |||||||||||||||||| |||| ||
Sbjct 2166 CTTCAGGCATAAGGATAGCCTAGCAGCCGCAGAGAGCCCAGATGGTATGAAAGTATCCAA 2225
Query 1926 --CGCGAGCTTGACCGAAGAACT-TGATGTTCTCTCCCCAAAGCTAAGTGATTGGTCGCG 1982
| | | | |||| |||||| | |||||||||||| |||| | | ||||||||||||||
Sbjct 2226 TTCAC-ATC-TGACTGAAGAA-TCTGATGTTCTCTCTCCAAGGTTGAGTGATTGGTCGCG 2282
Query 1983 AAGAGGGTCGGAGGACATGCTTGACTGTTTTCCGGAGGCTGATAATTCAGTTTTCATGGA 2042
|| ||| || || |||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct 2283 AAAAGGATCAGAAGACATGCTTGACTGTTTTCCGGAGGCTGATAATTCAATTTTTATGGA 2342
Query 2043 TGATATGAGATGTTTACCT-TCAATGTCATGCAGAACTCGTTTTGGTCCCAAGTCTGATC 2101
|||| ||||| ||||||| | ||||||||| ||||| ||||||||||||||||||||||
Sbjct 2343 TGATCTGAGAGGTTTACCGCT-AATGTCATGTAGAACCCGTTTTGGTCCCAAGTCTGATC 2401
Query 2102 AAGGCATGACTACTTCATCTGCCGGTAGCATGACTCCTAGATCCCCTATTCCAACCCCTA 2161
|||| ||||| |||||||||||| |||||||||||||||||||||| ||||| |||||||
Sbjct 2402 AAGGTATGACAACTTCATCTGCCAGTAGCATGACTCCTAGATCCCCGATTCCGACCCCTA 2461
Query 2162 GACCCGATCCAGTTGAATTGTTATTAGGAGGCAAGGGTACATTCCATGACCAGGATGAT- 2220
| || |||||| ||||| | ||||||||||||||||||||||||| || || ||||||
Sbjct 2462 GGCCTGATCCAATTGAACAGATATTAGGAGGCAAGGGTACATTCCACGATCAAGATGATA 2521
Query 2221 TTCTCTCAGATGAGTGAACTTGCTGACATTGCAAGATGCGCAGCAAATCCCATTCCAGTT 2280
||| | |||||||||||||||||||||||||||| ||| |||||| || ||||||| | |
Sbjct 2522 TTC-CACAGATGAGTGAACTTGCTGACATTGCAAAATGTGCAGCAGATGCCATTCCGGGT 2580
Query 2281 GATGATCAATCTATTCAGCTTT--TACTTTCTTGTCTTGAAGA-CTTGAGAGTTGTCATT 2337
||||||||||| |||| | || |||| |||||||||||||| || || ||||||||
Sbjct 2581 GATGATCAATCCATTC--CATTCCTACTGTCTTGTCTTGAAGATCTA-AGGGTTGTCATA 2637
Query 2338 GACCGCAGAAAGTTTGATGCACTTATAGTAGAAACTTTTGGAACACGCATAGAAAAGTTG 2397
||||||||||||||||||||||||| ||||||||| ||||| || |||||||||||||||
Sbjct 2638 GACCGCAGAAAGTTTGATGCACTTACAGTAGAAACATTTGGGACTCGCATAGAAAAGTTG 2697
Query 2398 ATACAG-GA-AAAGTATCTTCAGCTGTGCGAGCTTATGGATGATGAAAAAG--G-T--AC 2450
|| | | || ||| ||| | || |||| |||||||||||||||||||||| | | ||
Sbjct 2698 ATCC-GTGAGAAA-TATGTGCATATGTGTGAGCTTATGGATGATGAAAAAGTTGATCTAC 2755
Query 2451 ----CA-TG-A-TTGATGAAGATGCTCCTTTGGAAGATGATGTTGTTCGCAGCTTGAGGA 2503
|| || | |||||||||||||||| || ||||||||||||||||| ||||||||||
Sbjct 2756 TAAGCACTGTAATTGATGAAGATGCTCCCTTAGAAGATGATGTTGTTCGGAGCTTGAGGA 2815
Query 2504 CCAGTCCAGTACATCTGCGGGACCGCATATCCATAGATGATTTTGAGCTCAGGGAGAC-A 2562
|||| |||||||||| ||| || |||| |||||| |||||||||||| ||| | || |
Sbjct 2816 CCAGCCCAGTACATCCGCGAGATCGCACATCCATTGATGATTTTGAGATCATAAA-ACCA 2874
Query 2563 ATTAGTAGGGGAGCTTTTGGGC-ATGTTATCTTGGCTCGTAAGAACACTACAGGAGACCT 2621
|| ||| ||||||||||||||| | ||| | || || |||| || |||||||| ||
Sbjct 2875 ATAAGTCGGGGAGCTTTTGGGCGA-GTTTTTTTAGCGAAAAAGAGGACAACAGGAGATCT 2933
Query 2622 ATTTGCAATTAAGGTTCTGAGGAAGGCAGATATGATCCGCAAGAATGCTGTGGAAAGTAT 2681
||| ||||| |||||||||| |||||||||||||| || ||||||||||| ||||||||
Sbjct 2934 ATTCGCAATCAAGGTTCTGAAAAAGGCAGATATGATTCGTAAGAATGCTGTTGAAAGTAT 2993
Query 2682 ACTTGCTGAACGAGATATTTTGATCAACGCCCGCAATCCCTTTGTGGTTCGATTCTTCTA 2741
|||||||||||| ||||| |||||||||| |||||||| ||||||||||| ||||||||
Sbjct 2994 ACTTGCTGAACGTGATATATTGATCAACGTTCGCAATCCTTTTGTGGTTCGTTTCTTCTA 3053
Query 2742 TTCTTTTACTTGTAGCGAAAACCTGTATCTTG-TGATGGAATACCTCAATGGAGGGGATT 2800
|||||| || ||| | || ||||||||| ||| ||||||| || || ||||||||||||
Sbjct 3054 TTCTTTCACGTGTCGTGACAACCTGTAT-TTGGTGATGGAGTATCTGAATGGAGGGGATC 3112
Query 2801 TTTATTCAATGTTGAGAAAATTAGGTTGCTTGGATGAA-ACTAATGCCCGTGTATACATT 2859
| ||||| |||||||||| ||||||||||| || ||| | || || ||||||||| |||
Sbjct 3113 TGTATTCGTTGTTGAGAAATTTAGGTTGCTTAGAAGAAGA-TATTGTCCGTGTATATATT 3171
Query 2860 GCAGAAGTTGTCCTTGCTTTGGAATATTTACACTCTGAGGGTGTTGTGCATCGTGATTTG 2919
|| |||||||||||||||||||||||||| || |||||||||||||| || |||||||||
Sbjct 3172 GCTGAAGTTGTCCTTGCTTTGGAATATTTGCATTCTGAGGGTGTTGTTCACCGTGATTTG 3231
Query 2920 AAGCCTGACAATTTGTTGATTGCACATGATGGTCATGTTAAGTTGACAGATTTTGGGCTT 2979
||||| || |||||||||||||| |||||||||||| | ||||| |||||||| |||||
Sbjct 3232 AAGCCGGATAATTTGTTGATTGCGCATGATGGTCATATAAAGTTAACAGATTTCGGGCTC 3291
Query 2980 TCAAAAGTTGGTCTCATCAACAGCACCGATGATCTCTCTGGTCCAGTT-TCCAGTGC-AG 3037
|| ||||||||||||||||||||||| |||||||| ||||||| | | | |||| |
Sbjct 3292 TCTAAAGTTGGTCTCATCAACAGCACAGATGATCTGGCTGGTCCTGCTGTA-AGTGGGAC 3350
Query 3038 TGTCGCTGCTTGTTGAGGAGAAACCAAAATT-GC--C----GA----CA--TTG---GG- 3080
||| ||||||| ||||||| || || ||| || | || || ||| ||
Sbjct 3351 -GTCTCTGCTTGATGAGGAGGAATCACGATTAGCGGCATCTGAGGAACAACTTGAAAGGC 3409
Query 3081 GCAT-AAGCGGTCTGCAGTGGGCACTCCTGACTACTTAGCGCCAGAAATTCTTTTGGGGA 3139
||| || |||||||| ||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 3410 GCAAGAAACGGTCTGCTGTGGGTACTCCTGACTACTTAGCGCCAGAAATTCTTTTAGGGA 3469
Query 3140 CAGGACATGGTGCAACTGCGGATTGGTGGTCTGTTGGCATCATTTTGTATGAATTCATTG 3199
|||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||
Sbjct 3470 CAGGACATGGTGCAACTGCGGATTGGTGGTCTGTTGGCATCATTCTGTTTGAACTCATTG 3529
Query 3200 TGGGGATTCCGCCCTTCAATGCTGACCATCCTCAGCAAATCTTTGACAATATTCTCAACC 3259
|||| ||||| ||||||||||| || |||||||||||||| ||||| |||||||||||||
Sbjct 3530 TGGGAATTCCACCCTTCAATGCGGAACATCCTCAGCAAATATTTGATAATATTCTCAACC 3589
Query 3260 GAAATATACAATGGCCTCCTGTTCCTGAAGATATGAGC-CATGAAGCCCGTGATTTGATA 3318
| || |||| |||||||| |||||| ||||| ||||| | |||||||| |||| | |||
Sbjct 3590 GTAAGATACCATGGCCTCATGTTCCAGAAGAAATGAGTGC-TGAAGCCCATGATATAATA 3648
Query 3319 GATCGGTTATTAACAGAAGATCCCCATCAGAGACTTGGAGCTAGAGGGGCGGCTGAGGTC 3378
|| || || |||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 3649 GACCGATTTTTAACAGAAGATCCACATCAGAGACTTGGAGCTAGAGGGGCAGCTGAGGTC 3708
Query 3379 AAGCAGCACATCTTCTTTAAAGACATAAACTGGAACACTCTAGCACAA-CAGAAGGCTGC 3437
|||||||||||||||||||||||||| |||||| |||| |||||| | || ||||||||
Sbjct 3709 AAGCAGCACATCTTCTTTAAAGACATCAACTGGGACACACTAGCA-AGGCAAAAGGCTGC 3767
Query 3438 ATTTGTGCCGGATTCAGAAAATGCTTTTGACACAAGTTACTTCCAGA-GTCGCTACTCGT 3496
|||||| |||| |||||| | ||| ||||||||||||||||| ||| ||||||||||||
Sbjct 3768 ATTTGTTCCGGCTTCAGAGAGTGCAATTGACACAAGTTACTTC-AGAAGTCGCTACTCGT 3826
Query 3497 GGAACT-ATTCGGATGAGCAATGTTTTCCTCC--CAATGAGAATGAAGATTGTAGTGACG 3553
||||| || | |||||||||| |||||| | | |||| | ||||| |||||| |
Sbjct 3827 GGAACACAT-CAGATGAGCAAT-TTTTCC-CAAGCGGTGAGGTTCCAGATTATAGTGATG 3883
Query 3554 GTGACAGCTTGAGTGGCAGTAGTGGTCGCTTAAGCAATCATCACGACGAGGGGG 3607
||| ||| ||| | ||| |||||| ||| ||||||||||| || || ||||
Sbjct 3884 CTGATAGCATGACTAACAGCAGTGGTTGCTCGAGCAATCATCATGAAGAAGGGG 3937
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 188276537079
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5