BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg336994
Length=1185
Score E
Sequences producing significant alignments: (Bits) Value
AT1G48740.2 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-depen... 913 0.0
AT5G43660.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-depen... 684 0.0
AT1G48700.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-depen... 453 2e-126
> AT1G48740.2 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein | chr1:18023387-18026065
REVERSE LENGTH=1544
Length=1544
Score = 913 bits (494), Expect = 0.0
Identities = 613/669 (92%), Gaps = 13/669 (2%)
Strand=Plus/Plus
Query 1 ATGGCGGTGGACGGTGACGGAACTGTTGGTGGTGGAGATTCTCAACCACCGGTGACTACT 60
|||||| |||||||||||| ||| || | ||||||||||||||||||||||||||||||
Sbjct 106 ATGGCGTTGGACGGTGACGAAACAGTCGCAGGTGGAGATTCTCAACCACCGGTGACTACT 165
Query 61 GCGGCGGCGACGAC--A-GAGATGGCTATCGCGAGGCTGAGTCGGTTTCCTAACATGGAG 117
|| |||||||| || | |||| |||||||||||||||||||| ||||||||||||||||
Sbjct 166 GCAGCGGCGACTACAGAGGAGAAGGCTATCGCGAGGCTGAGTCCGTTTCCTAACATGGAG 225
Query 118 CATATTTCTGATAACTAC-GACGATCTGAAACTGGAATTTAGCTCTTCCATGTTAAGCTC 176
|| ||||||||||||||| || |||||| ||||||||| ||||||| |||||||||||||
Sbjct 226 CACATTTCTGATAACTACGGA-GATCTGGAACTGGAATATAGCTCTGCCATGTTAAGCTC 284
Query 177 GCTAGAGAAGTACTTGCCGCCGGCAATGCTCACGGCGAAC-AGAGAAGAGAAGGCCAAAT 235
||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||
Sbjct 285 GCTAGAGAAGTACTTGCCGCCGGAAATGCTCACGGCG-ACTAGAGAAGAGAAGGCCAAAT 343
Query 236 TCATGTCAGACATTTTGCGCAAGTACATTTCCCGCGAAGAATGTTCCAAAGCTAATTGGC 295
||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 344 TCATGTCTGACATTTTGCGCAAGTACATTTCCCGCGACGAATGTTCCAAAGCTAAATGGT 403
Query 296 GCAAGACCTATTCGCAGAGGATAAAATCCAATTATCAGCCACTTTGC-AGGGAGTTGTAT 354
|||||| ||||| ||||| ||||||||| |||||||||||||||| | ||||||||||||
Sbjct 404 GCAAGAACTATTGGCAGAAGATAAAATCTAATTATCAGCCACTTT-CTAGGGAGTTGTAT 462
Query 355 AATTTTGATCCCGAATTGTTTCTGCTTCCCTCTTTCCGAAAGGCGATCAGCGACAACACA 414
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 463 AATTTTGATCCCGAATTGTTTCTGCTTCCCTCTTTCCGAAAGGCGATCAGCGAAAACACA 522
Query 415 GAGGAAAGCTTCAGACGCATCATTTCTGAACCGTTTCCTGGTGTTTTTGTCTTTCAAATG 474
|||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct 523 AAGGAAAGCTTCAGACGTATCATTTCTGAACCGTTTCCTGGTGTTCTTGTCTTTCAAATG 582
Query 475 TTTCAGCCTGATTTCTTTCAGAAATTGATAGTAGAGGTAGAAAATATCAAAAAGTGGGCT 534
||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||| |
Sbjct 583 TTTCAGCCTGACTTCATTCAGAAATTGATAGTAGAGGTAGAAAATATCGGAAAGTGGGTT 642
Query 535 CATGAGAAAAAGTTCCAAATTAGGAGACCGTACCACACGAGTAGATACGGTGTTGTGCTT 594
||||||| ||| |||| ||| |||||||||||||||| ||||| ||||||||||| | ||
Sbjct 643 CATGAGACAAATTTCCCAATCAGGAGACCGTACCACATGAGTAAATACGGTGTTGCGTTT 702
Query 595 GAT-GACTTTGGCCTGGATATCATGCTTAAGACA-CTCATGGAGGATTTTATCTTTCCTA 652
| | |||||||||||||||||||||||| || || ||||||||||| ||| |||||||||
Sbjct 703 G-TCGACTTTGGCCTGGATATCATGCTTCAG-CAACTCATGGAGGAATTTCTCTTTCCTA 760
Query 653 TTTGCAAAG 661
|||||||||
Sbjct 761 TTTGCAAAG 769
Score = 638 bits (345), Expect = 0.0
Identities = 415/449 (92%), Gaps = 4/449 (1%)
Strand=Plus/Plus
Query 701 TATTTTTCCCTGAACTGTGTGGAACAATGTTTGACTCTCACCATGGAT-TTATTATTGAA 759
|||| ||||||||| ||||||| |||||||||||||||||||||||| ||| |||||||
Sbjct 770 TATTCTTCCCTGAAGAGTGTGGAGCAATGTTTGACTCTCACCATGGATATTA-TATTGAA 828
Query 760 AATGGTGAAGATAGGGATGCTCCATTAGACCATCATTTTGATGATTCAGAAATAACATTG 819
|||||||||||||||||| ||||||||| | ||||||| |||||||| ||||||||||||
Sbjct 829 AATGGTGAAGATAGGGATCCTCCATTAGGCTATCATTTAGATGATTCGGAAATAACATTG 888
Query 820 AATGTTTGTGTGAGGAAACAATTTGAGGGAGGGGAAATATCTTTCATTGGCACACGATGC 879
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 889 AATGTTTGTGTGAGGAAACAATTTGAGGGAGGGGAAATATCTTTCATAGGCACACGATGC 948
Query 880 GTGAAACATATGCGAACAAATATAAAGCCAGAGGAAGTTTTTCATTACAGTCATACACCG 939
||| ||||| ||||||| | |||||||||||||||||||||||||| ||||| |||||
Sbjct 949 TTGAGACATAAGCGAACAGACGTAAAGCCAGAGGAAGTTTTTCATTACTGTCATTCACCG 1008
Query 940 GGTCAAGCTATACTTCACCGTGGCCGCCACCGCCATGGTCCCAGAACCACCACA-AATTC 998
||||||||||||||||| ||||||||||||||||||||||||||| ||| |||| | ||
Sbjct 1009 GGTCAAGCTATACTTCATCGTGGCCGCCACCGCCATGGTCCCAGAGCCAACACACCA-TC 1067
Query 999 TTGTTCTCGGGCCAATATGATTCTTTGTTGCAGAAACTCTTTGTTTAGAGAGATGGAAAC 1058
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1068 TTGTTCTCGGGCCAATATGATTCTTTGTTGCAGAAACTCTTTGTTTAGAGAGATGGAAAA 1127
Query 1059 TTATGAGAAGGAATTCCCAGAGTGGTGCGGTCAATGCGCCCATGAAAAGAAAGAAAAGGA 1118
|||||||| || ||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct 1128 ATATGAGAAAGATTTCCCAGAGTGGTGCAATGAATGCGCCCATGAAAAGAAAGAAAAGGA 1187
Query 1119 AAGCCAGAGTCTTGCTGCCAAAAGAAAGG 1147
|||||||||||||| ||||||||||||||
Sbjct 1188 AAGCCAGAGTCTTGATGCCAAAAGAAAGG 1216
> AT5G43660.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein | chr5:17536337-17538595
REVERSE LENGTH=1233
Length=1233
Score = 684 bits (370), Expect = 0.0
Identities = 573/669 (86%), Gaps = 21/669 (3%)
Strand=Plus/Plus
Query 5 CGGTGGACGGTGACGGAACTGTTGGTGGTGGAGATTC-TCAACCACCGGTG---ACTACT 60
|||||||||||||| ||||||| || ||| |||| || ||||||||||||| ||||||
Sbjct 71 CGGTGGACGGTGACAGAACTGTCGGAGGTAGAGA-TCATCAACCACCGGTGACTACTACT 129
Query 61 GCGGCGGCGACGACAGAGATGGCTATCGCGAGGCTGAGTCGGT-TTCCTAACATGGAGCA 119
|| |||||||| ||| ||||||||||| |||||||||||| | ||||||||| |||||
Sbjct 130 GCAGCGGCGACAACAAAGATGGCTATCCCGAGGCTGAGTC-TTCTTCCTAACAACGAGCA 188
Query 120 TATTTCTGATAACTACGACGATCTGAAACTGGAATTTAGCTCTTCCATGTTAAGCTCGCT 179
| ||||||||||||||| |||||| |||| ||||||||||||||| | ||||| || ||
Sbjct 189 CAATTCTGATAACTACGAAGATCTGGAACTTGAATTTAGCTCTTCCGTATTAAGATCCCT 248
Query 180 AGAGAAGTACTTGCCGCCGGCAATGCTCACGGCGAACAGAGAAGAGAAGGCCAAATTCAT 239
||||| |||||| ||||||| ||| ||||||||||| |||||||||||||||||||||||
Sbjct 249 AGAGAGGTACTTACCGCCGGAAATACTCACGGCGAATAGAGAAGAGAAGGCCAAATTCAT 308
Query 240 GTCAGACATTTTGCGCAAGTACATTTCCCGCGAAGAATGTTCCAAAGCTA-ATTGGCGCA 298
|||||||||||||| ||||||||||||||||||||||||| ||||||||| | || ||
Sbjct 309 GTCAGACATTTTGCACAAGTACATTTCCCGCGAAGAATGTGCCAAAGCTATAC-GGTTCA 367
Query 299 AGACCTATTCGCAGAGGATAAAATCCAATTATCAGCCAC-TTTGCAGGGAGTTGTATAAT 357
||| |||| | || |||||| |||||||||||||||| ||| |||||||||||||||
Sbjct 368 AGAACTATAGGGAGTGGATAATGTCCAATTATCAGCCACGTTT-CAGGGAGTTGTATAAA 426
Query 358 TTTGATCCCGAATTGTT-TCTGCTTCCCTCTTTCCGAAAGGCGATCAGCGACAACACAGA 416
|||||||||||| ||| | ||||||| | |||||| |||||| |||| || ||||| ||
Sbjct 427 CTTGATCCCGAATCGTTAT-TGCTTCCGTGTTTCCGCAAGGCGGTCAGAGAAAACACCGA 485
Query 417 GGAAAGCTTCAGACGCATCAT-TTCTGAACCGTTTCCTGGTGTTTTTGTCTTTCAAATGT 475
||||||||||||||| || || || |||||||||||||||||||| |||||| ||||||
Sbjct 486 GGAAAGCTTCAGACGTATAATGTT-TGAACCGTTTCCTGGTGTTTACGTCTTTAAAATGT 544
Query 476 TTCAGCCTGATTTCTTTCAGAAATTGATAGTAGAGGTAGAAAATATCAAAAAGTGGGCT- 534
|||||||||| ||||||||||||||| | || |||||||| ||||| | ||||||| ||
Sbjct 545 TTCAGCCTGACTTCTTTCAGAAATTGCTTGTTGAGGTAGAGAATATGAGAAAGTGG-CTT 603
Query 535 CATGAGA-AAAAGTTCCAA-ATTAGGAGACCGTACCACACGAGTAGATACGGTGTTGTGC 592
|||||| |||| || | || |||| ||| || | | ||||| ||| ||||||||||
Sbjct 604 CATGAGGCAAAA-TTG-ATGATCAGGAAACCAAACAATAAGAGTAAATATGGTGTTGTGC 661
Query 593 TTGATGACTTTGGCCTGGATATCATGCTTAAGACACTCATGGAGGATTTTATCTTTCCTA 652
|||| ||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 662 TTGACGACTTTGGCATGGATATCATGCTTAAGCCACTCGTGGAGGATTTTATCTTTCCTA 721
Query 653 TTTGCAAAG 661
|||||||||
Sbjct 722 TTTGCAAAG 730
> AT1G48700.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein | chr1:18011035-18012871
REVERSE LENGTH=1174
Length=1174
Score = 453 bits (245), Expect = 2e-126
Identities = 346/393 (88%), Gaps = 13/393 (3%)
Strand=Plus/Plus
Query 275 AATGTTCCAAAGCTAATTGGCGCAAGACCTATTCGC-AGAGGATAAAATCCAATTATCAG 333
|||||||| | ||||| |||||||||||||| || ||| ||||| |||||||||||||
Sbjct 48 AATGTTCC-AGGCTAAACGGCGCAAGACCTATAGGCAAGA-GATAATATCCAATTATCAG 105
Query 334 CCAC-TTTGC-AGGGAGTTGTATAATTTTGATCCCGAATTGTTTCTGCTTCCCTCTTTCC 391
|||| ||| | |||| ||||||||| |||||||| |||||||| |||||||||| ||||
Sbjct 106 CCACGTTT-CAAGGG-GTTGTATAAACTTGATCCCAAATTGTTTTTGCTTCCCTCGTTCC 163
Query 392 GAAAGGCGATCAGCGACAACACAGAGGAAAGCTTCAGACGCATCATTTCTGAACCGTTTC 451
| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct 164 GCAAGGCGATCAGCGAAAACACAGAGGAAAGCTTCAGACGTATCATTTCTGAACCGTTTC 223
Query 452 CTGGTGTTTTTGTCTTTCAAATGTTTCAGCCTGATTTCTTTCAGAAATTGATAGTAGAGG 511
||||||||||||||||| |||||||||||||||| |||| | |||||||| || ||||||
Sbjct 224 CTGGTGTTTTTGTCTTTAAAATGTTTCAGCCTGACTTCTCTGAGAAATTGCTATTAGAGG 283
Query 512 TAGAAAATATCAAAAAGTGGGCTCATGAGAAAAAGTTC-CAAATTAGGAGACC-GTACCA 569
|||| ||| ||| |||||||||| |||||| ||| ||| | | | |||||||| | || |
Sbjct 284 TAGAGAATTTCAGAAAGTGGGCTAATGAGACAAACTTCACGA-TCAGGAGACCAG-ACAA 341
Query 570 CACGAGTAGATACGGTGTTGTGCTTGATGACTTTGGCCTGGATATCATGCTTAAGACA-C 628
|||||||| |||||||||||| ||||| ||||||||||||||||| ||||||||| || |
Sbjct 342 CACGAGTAAATACGGTGTTGTACTTGACGACTTTGGCCTGGATATTATGCTTAAG-CAAC 400
Query 629 TCATGGAGGATTTTATCTTTCCTATTTGCAAAG 661
||||||| |||||||||||||||||||||||||
Sbjct 401 TCATGGATGATTTTATCTTTCCTATTTGCAAAG 433
Score = 431 bits (233), Expect = 8e-120
Identities = 394/468 (84%), Gaps = 25/468 (5%)
Strand=Plus/Plus
Query 701 TATT-TTTCCCTGAACTGTGTGGAACAATGTTTGACTCTCACCATGGATTTATTATTGAA 759
|||| ||| |||||| |||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 434 TATTCTTT-CCTGAAGTGTGTGGAACAATGTTTGACTCTCACTATGGATTTTTTATTGAA 492
Query 760 AATGGTGAAGATAGGGATGCTC-CATTAGACCATCATTTTGATGATTCAGAAATAACATT 818
||||||||||||||||||||| | | || | |||| | || |||||||| ||||||||
Sbjct 493 AATGGTGAAGATAGGGATGCTGACGT-AGGCTTTCATGTGGAAGATTCAGACATAACATT 551
Query 819 GAATGTTTGTGTGAGGAAACAATTTGAGGGAGGGGAAATATCTTT-CATTGGCACACGAT 877
|||||||||| |||| |||||| ||||||||| |||||| |||| | ||| ||||||
Sbjct 552 GAATGTTTGTTTGAGTAAACAAGGTGAGGGAGGAGAAATA-CTTTTCGCAGGCGCACGAT 610
Query 878 GCG-TGAAACATATGCGA-ACAAATATAAAGCCAGAGGAAGT-TTTTCATTACAGTCATA 934
|| | ||||||||| || | | || ||||||||||||| | |||| ||||| | ||||
Sbjct 611 GCAAT-AAACATATG-GATATAGATCCAAAGCCAGAGGAA-TATTTTGATTACTGCCATA 667
Query 935 CACCGGGTCAAGCTATACTTCACCGTGGCCGCCACCG-CCATGGTCCCAGAACCACCA-C 992
|||||||||||||||||||||||||||| ||||| | ||||||| | ||| |||| | |
Sbjct 668 TACCGGGTCAAGCTATACTTCACCGTGGCTGCCAC-GTCCATGGTGCTAGAGCCAC-AGC 725
Query 993 AAATTCTTGTTC-TCGGGCCAATATGATTCTTTGTTGC-AGAAACTCTTTGTTTAGAGAG 1050
| | || || | ||||||||||||||||||||| ||| |||| ||||||||||||||||
Sbjct 726 A--T-CTGGT-CGTCGGGCCAATATGATTCTTTGGTGCCAGAA-CTCTTTGTTTAGAGAG 780
Query 1051 ATGGAAACTTATGAGAA-GGAATTCCCAGAGTGGTGCGGTCAATGCGCCCATGAAAAGAA 1109
||| |||||||||| | ||||||| |||| |||||||||||||| | ||||||| ||||
Sbjct 781 ATGCAAACTTATGA-ACCGGAATTCTCAGACTGGTGCGGTCAATGTGTCCATGAAGAGAA 839
Query 1110 AGAAAAGGAAAGCCAGAGTCTTGCTGCCAAAAGAAAGGGGATGATTAG 1157
|||||| ||||||||| |||||||| ||||||||||| |||| ||||
Sbjct 840 AGAAAACAAAAGCCAGATTCTTGCTGTCAAAAGAAAGGAGATGTTTAG 887
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 58182431655
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5