BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg337630 Length=1761 Score E Sequences producing significant alignments: (Bits) Value AT1G55500.2 | Symbols: ECT4 | evolutionarily conserved C-termin... 2543 0.0 AT3G13460.1 | Symbols: ECT2 | evolutionarily conserved C-termin... 1112 0.0 > AT1G55500.2 | Symbols: ECT4 | evolutionarily conserved C-terminal region 4 | chr1:20719548-20722739 FORWARD LENGTH=2322 Length=2322 Score = 2543 bits (1377), Expect = 0.0 Identities = 1623/1734 (94%), Gaps = 48/1734 (3%) Strand=Plus/Plus Query 20 AGACGGCTGTTTATCAGTATGGAGCTATGGATTCGAAGGGTCAAGTTCCTTCTTTTGATC 79 |||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 303 AGACGGGTGTTTACCAGTATGGAGCTATGGATTCGAATGGTCAAGTTCCTTCTTTTGATC 362 Query 80 GATCTTTGTCACCAATGCTACCCAGCGATGCCCTGGATCCTTCTGTTTTCTATGTTCCTA 139 ||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct 363 GATCTTTGTCACCTATGCTACCCAGTGATGCCTTGGATCCTTCTGTTTTCTATGTTCCTA 422 Query 140 ACGTGTATCAGCAGCCCTACTTTTATGGTTATGGGAGTGACTACACAGGTTATACCAATT 199 | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 423 ATGTGTATCAGCAGCCCTACTATTATGGTTATGGGAGTGACTACACAGGTTATACCAATT 482 Query 200 CCGAGAGTGTTGATATGACATCAGGAGCTTACGGAGAGAACGCATCTCTTGCTTATCCAC 259 |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| | Sbjct 483 CCGAGAGTGTTGATATGACATCAGGAGCTTACGGAGAGAATGCATCTCTTGTTTATCCGC 542 Query 260 AGGGATATGGGTATGCTACCTATCCTTACTCACCAGCAACAAGCCCTGCTCCACAACTTG 319 ||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct 543 AGGGATACGGGTATGCTGCCTTTCCTTACTCACCAGCAACAAGCCCTGCTCCACAACTTG 602 Query 320 GTGGTGATGGACAGTTGTATGGTGCTCAACAGTACCAGTATCCTTTTCCTCTAACAGCCA 379 |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct 603 GTGGTGATGGACAGTTGTATGGTGCTCAGCAGTACCAGTATCCTTTTCCTCTCACAGCCA 662 Query 380 GTAGTGGGCCTTTCGTTTCATCTGTTCCTGCCTCTACCCAAAGTAAGCTCTCTACAAACA 439 ||||||||||||||| ||| ||||||||||||||||| || || |||||||||||||||| Sbjct 663 GTAGTGGGCCTTTCGCTTCGTCTGTTCCTGCCTCTACTCAGAGCAAGCTCTCTACAAACA 722 Query 440 AAGCAGCCAACTCTGCATCTGCTGGTGCTTCGAAGGGTGGTTTCCATAAAGGAATGAATG 499 ||||||||||||||||||||||| | | | | ||| |||||||||||||| Sbjct 723 AAGCAGCCAACTCTGCATCTGCT-G-G--T---A--------TCCCTAAAGGAATGAATG 767 Query 500 GTTCAGCTCCTGTTAAACCATTG----A-A-T---C---A--G----AGTGCTCTTGGAG 541 | ||||||||||||||||||||| | | | | | | ||||||||||||| Sbjct 768 GATCAGCTCCTGTTAAACCATTGAATCAGAGTGCACTGTATGGAAACAGTGCTCTTGGAG 827 Query 542 GTGGTCTTGCTGCTGGTTATCAGGATCCCAGGTATACCTATGATGGGTTTTACAATCCCG 601 ||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||| | Sbjct 828 GTGGTCTTGCTGCTGGTTATCAGGACCCCAGGTATAGCTATGATGGGTTTTACACTCCTG 887 Query 602 TGTCATGGCACGATGGCTCTAACTTCTCAGATGTGCAGAGGTCTGTTTCTGCCAGTGGAG 661 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 888 TGTCATGGCACGATGGCTCTAACTTCTCAGATGTGCAGAGGTCTGTTTCTGGCAGTGGAG 947 Query 662 TTGCATCCTCATATTCTAAGGCTAACAACAATGTACCTGCGTCTAGGAATCAAAAC-CAT 720 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | | Sbjct 948 TTGCATCCTCATATTCTAAGGCTAACAACAATGTACCTGCGACTAGGAATCAAAACTC-T 1006 Query 721 CGCTCCAATTCGCATTACACAAGTATGTACCAGCCTGCATCCATGACAGGTTATGCAGCT 780 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1007 AGCTCCAATTCGCATTACACGAGTATGTACCAGCCTGCATCCATGACAGGTTATGCAGCT 1066 Query 781 CAGGGTTACTACGACAGAGTGTAC-CCAAACAAGTCATATGGTCAGTATGGTAGCACGGT 839 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct 1067 CAGGGTTACTACGACAGAGTGT-CTCCAAACAAGTCATATGGTCAGTATGGTAGCACGGT 1125 Query 840 GAGATCTGGTATGGGCTATGGTTCTTCTGGATATGATTCAAGAACAAACGAAAGAGGATG 899 ||| ||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||| Sbjct 1126 GAGGTCTGGTATGGGTTATGGTTCTTCTGGATATGGTTCAAGAACAAATGAAAGAGGATG 1185 Query 900 GCTGACTACGGAAAACAAATATAGAAGCCGGGGAAGGGGTAACAGTTACTTCTATGGAAA 959 ||| | ||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1186 GCTCAATACAGACAACAAATATAGAAGCCGGGGAAGGGGTAACAGTTACTTCTATGGAAA 1245 Query 960 TGAGAACATTGATGGCCTGAATGAACTAAACAGGGGCCCTAGAGCCAAGGGCACGAAGAA 1019 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1246 TGAGAACATTGATGGCTTGAATGAACTAAACAGGGGCCCTAGAGCCAAGGGCACGAAG-G 1304 Query 1020 CCAAAAGGACACCATAGAGGTTAGCTTAGAGGAGGTGAAAGAGCAGACGTTTGATGAATC 1079 || ||| | ||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 1305 CC------ACA-GA-AGAGGTTAGCTCAGAGGAGGTGAAAAAGCAGACGTTTGATGAATC 1356 Query 1080 AAATACTGAGGAGACTGTAACATGCGTTCTTCCAGATAGAGAAGAGTACAACAGAGACGA 1139 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1357 AAATACTGAGGAGACTGTAACATGCGTTCTTCCAGATAGAGAAGAGTGCAACAGAGACGA 1416 Query 1140 TTTTCCAGTTGAGTATAAAGATGCTATGTTCTTTATCATCAAGTCGTACAGTGAAGATGA 1199 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1417 TTTTCCAGTTGAGTATAAAGATGCTAAGTTCTTTATCATCAAGTCGTACAGTGAAGATGA 1476 Query 1200 TGTGCATAAGAGCATCAAATATAATGTTTGGGCTAGCACCCCAAATGGAAACAAGAAGCT 1259 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1477 TGTGCATAAGAGCATCAAATATAATGTATGGGCTAGCACCCCAAATGGAAACAAGAAGCT 1536 Query 1260 TGCTGCTGCATATCAGGAGGCTCAGCAGAAATCTGGTGGCTGCCCTGTGTTCCTCTTCTT 1319 || |||||||||||| |||||||||||||||||| |||||||||||||||| |||||||| Sbjct 1537 TGATGCTGCATATCAAGAGGCTCAGCAGAAATCTAGTGGCTGCCCTGTGTTTCTCTTCTT 1596 Query 1320 CTCGATCAACGCAAGTGGACAATTTGTTGGGCTTGCGGAAATGAAAGGACCAGTTGATTT 1379 |||| ||||||| |||||||||||| |||| ||||||||||||||||||||||||||||| Sbjct 1597 CTCGGTCAACGCGAGTGGACAATTTATTGGCCTTGCGGAAATGAAAGGACCAGTTGATTT 1656 Query 1380 CAACAATAATATTGAGTACTGGCAACAGGATAAGTGGACTGGCTCATTTCCCCTCAAGTG 1439 |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1657 CAACAAAAATATTGAGTACTGGCAACAGGATAAATGGACTGGCTCATTTCCCCTCAAGTG 1716 Query 1440 GCATATTGTGAAGGATGTGCCCAACAGTTTGCTTAAGCATATTACTCTAGAGAACAATGA 1499 ||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct 1717 GCATATTCTGAAGGATGTTCCCAACAGTTTGCTTAAGCATATTACTCTAGAGTACAATGA 1776 Query 1500 GAATAAACCTGTTACCAACAGTAGAGACACACAAGAGGTTAAGTTGGAGCAGGGTTTGAA 1559 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1777 GAATAAACCTGTTACTAACAGTAGAGACACACAAGAGGTTAAGTTGGAGCAGGGTTTGAA 1836 Query 1560 GGTTGTAAAGATTTTCAAGGAGCATACCAGCAAGACATGCATTTTGGATGATTTCTCGTT 1619 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1837 GGTTGTAAAGATTTTCAAGGAGCATAACAGCAAGACATGCATTTTGGATGATTTCTCGTT 1896 Query 1620 CTACGAGGCTCGACAAAAGACTATTTTGGAGAAGAAAGCTAAGCAGCAACAATCCCAGAA 1679 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1897 CTACGAGGCTCGACAAAAGACTATTTTGGAGAAGAAAGCTAAGCAGCAACAATCCCAGAA 1956 Query 1680 GCAGGCAAGAGAAGAAA-CGGTTTGGGAAGGAAAAACCAATGATGAGAA-CCAG 1731 ||||||||||||||||| |||| |||||||||||||||||||||||||| |||| Sbjct 1957 GCAGGCAAGAGAAGAAAACGGTCTGGGAAGGAAAAACCAATGATGAGAAACCAG 2010 > AT3G13460.1 | Symbols: ECT2 | evolutionarily conserved C-terminal region 2 | chr3:4384714-4388525 REVERSE LENGTH=2869 Length=2869 Score = 1112 bits (602), Expect = 0.0 Identities = 987/1166 (85%), Gaps = 53/1166 (5%) Strand=Plus/Plus Query 530 GTGCTCTTGGAGGTGGTCTT-GCTGCTGGTTATCAGGATCCCAGGTATACCTATGATGGG 588 |||||| ||||| ||| || ||||||||||||||||| ||||||||| ||||||| ||| Sbjct 988 GTGCTCCAGGAGGAGGT-TTGGCTGCTGGTTATCAGGACCCCAGGTATGCCTATGAAGGG 1046 Query 589 TTTTACAATCCCGTGTCATGGCACGATGGCTCTAACTTCTCAGATGTGCAGAGGTCTGTT 648 | ||| ||| ||| | ||||||||||||||||| | ||| ||||||||||| ||||| Sbjct 1047 TATTATGCTCCTGTGCCGTGGCACGATGGCTCTAAGTACTCTGATGTGCAGAGACCTGTT 1106 Query 649 TCTGCCAGTGGAGTTGCATCCTCATATTCTAAGGCTAACAACAATGTACCTGCGTCTAGG 708 |||| ||||||||||||||||| ||||||||| ||| | || | |||||| | || ||| Sbjct 1107 TCTGGTAGTGGAGTTGCATCCTCCTATTCTAAGTCTAGC-AC-A-GTACCTTCATCGAGG 1163 Query 709 AATCAAAACCATCGCTCCAATTCGCATTACACAAGTATGTACCAGCCTGCATCCA-TGAC 767 ||||||||| | ||||| ||||| || ||||| || || |||||||| ||| || |||| Sbjct 1164 AATCAAAACTACCGCTCAAATTCTCACTACACGAGCGTGCACCAGCCTTCAT-CAGTGAC 1222 Query 768 AGGTTAT-G--CAGCTCAGGGTTACTACGACA-GAGTGTACCCA-AACAAGTCATATGGT 822 || ||| | |||||||||| |||||| ||| || |||| || ||||||| ||||||| Sbjct 1223 TGGCTATGGTACAGCTCAGGGGTACTACAACAGGA-TGTA-TCAGAACAAGTTATATGGT 1280 Query 823 CAGTATGGTAGCAC-GGTGAGATCTGGTATGGGCTATGGTTCTTCTGGATATGATTCAAG 881 |||||||||||||| || |||||||| | |||| |||||||| ||||| ||||||||||| Sbjct 1281 CAGTATGGTAGCACAGG-GAGATCTGCTTTGGGTTATGGTTCATCTGGGTATGATTCAAG 1339 Query 882 AACAAACGAAAGAGGAT-GGCTGACTACGGAAAACAAATATAGAAGCCGGGGAAGGGGTA 940 |||||| | |||||||| ||| | | || || |||||||| |||||| |||| ||||||| Sbjct 1340 AACAAATGGAAGAGGATGGGC-GGCCACAGACAACAAATACAGAAGCTGGGGCAGGGGTA 1398 Query 941 ACAGTTACT-TCTATGGAAATGAGAAC-AT-T-GATGGCCTGAATGAACTAAACAGGGGC 996 ||||||||| | || |||||||||||| || | ||||| |||||||||| |||||||| Sbjct 1399 ACAGTTACTAT-TACGGAAATGAGAACAATGTAGATGGTTTGAATGAACTTAACAGGGGA 1457 Query 997 CCTAGAGCCAAGGGCACGAAGAACCA-AAAGGACACCATAGAGGTTAGCTTAGAGGAGGT 1055 |||||||| |||||||| |||||||| || ||| | | |||| | |||||| | ||||| Sbjct 1458 CCTAGAGCTAAGGGCACAAAGAACCAGAAGGGAAATC-TAGATGATAGCTT--A-GAGGT 1513 Query 1056 GAAAGAGCAGACGTTTGATGAATCAAA--T-ACTGA------GGAGACTG-T-A-ACATG 1103 || |||||||| | || |||||||| | ||||| |||| | | | | ||||| Sbjct 1514 TAAGGAGCAGAC--TGGA-GAATCAAATGTAACTGAGGTTGGGGAGGCGGATAACACATG 1570 Query 1104 CGTTCTTCCAGATAGAGAAGAGTACAACAGAGACGATTTTCCAGTTGAGTAT-AAAGATG 1162 ||| |||| || |||||| ||||||| | ||| ||||| ||||| || ||| || ||| Sbjct 1571 TGTTGTTCCTGACAGAGAACAGTACAATAAAGAAGATTTCCCAGTGGATTATGCAA-ATG 1629 Query 1163 CTATGTTCTTTATCATCAAGTCGTACAGTGAAGATGATGTGCATAAGAGCATCAAATATA 1222 | |||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct 1630 CCATGTTCTTTATCATCAAGTCATACAGTGAAGATGATGTGCACAAGAGCATTAAATATA 1689 Query 1223 ATGTTTGGGCTAGCACCCCAAATGGAAACAAGAAGCTTGCTGCTGCATATCAGGAGGCTC 1282 |||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| |||| Sbjct 1690 ATGTTTGGGCTAGCACACCAAATGGAAACAAGAAGCTTGCTGCAGCATACCAGGAAGCTC 1749 Query 1283 AGCAGAAATCTGGTGGCTG-CCCTGTGTTCCTCTTCTTCTCGATCAACGCAAGTGGACAA 1341 | |||||| |||| ||||| ||| | || || || |||||| |||| |||||||||||| Sbjct 1750 AACAGAAAGCTGGCGGCTGTCCC-ATCTTTCTGTTTTTCTCGGTCAATGCAAGTGGACAA 1808 Query 1342 TTTGTTGGGCTTGCGGAAATGAAAGGACCAGTTGATTTCAACA-ATAATATTGAGTACTG 1400 |||||||| ||||| ||||||| |||||||||||||||||||| | ||| | |||||||| Sbjct 1809 TTTGTTGGTCTTGCTGAAATGACAGGACCAGTTGATTTCAACACA-AATGTGGAGTACTG 1867 Query 1401 GCAACAGGATAAGTGGACTGGCTCATTT-CCCCTCAAGTGGCATATTGTGAAGGATGTGC 1459 ||| || ||||||||||| ||||| ||| ||||||||||||||||||||||||||||||| Sbjct 1868 GCAGCAAGATAAGTGGACCGGCTC-TTTCCCCCTCAAGTGGCATATTGTGAAGGATGTGC 1926 Query 1460 CCAACAGTTTGCTTAAGCATATTACTCTAGAGAACAATGAGAATAAACCTGTTACCAACA 1519 | |||||||| || |||||||||||| |||||||||||||||| |||||||||||||||| Sbjct 1927 CAAACAGTTTACTGAAGCATATTACTTTAGAGAACAATGAGAACAAACCTGTTACCAACA 1986 Query 1520 GTAGAGACACACAAGAGGTTAAGTTGGAGCAGGGTTTGAAGGTTGT-AAAGATTTTCAAG 1578 | ||||||||||||||||||||||||||||| ||||||||| |||| ||| ||||||||| Sbjct 1987 GCAGAGACACACAAGAGGTTAAGTTGGAGCAAGGTTTGAAGATTGTGAAA-ATTTTCAAG 2045 Query 1579 GAGCATACCAGCAAGACATGCATTTTGGATGATTTCTCGTTCTACGAGGCTCGACAAAAG 1638 ||||||| ||||||||| |||||||||||||||||||| |||||||||| |||||| ||| Sbjct 2046 GAGCATAGCAGCAAGACTTGCATTTTGGATGATTTCTCATTCTACGAGGTTCGACAGAAG 2105 Query 1639 ACTATTTTGGAGAAGAAAGCTAAGCA 1664 ||||| |||||||||||||| ||||| Sbjct 2106 ACTATCTTGGAGAAGAAAGCCAAGCA 2131 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 87097945575 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5