BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg337726 Length=552 Score E Sequences producing significant alignments: (Bits) Value AT1G54400.1 | Symbols: | HSP20-like chaperones superfamily pro... 815 0.0 > AT1G54400.1 | Symbols: | HSP20-like chaperones superfamily protein | chr1:20307667-20308768 FORWARD LENGTH=552 Length=552 Score = 815 bits (441), Expect = 0.0 Identities = 520/557 (93%), Gaps = 10/557 (2%) Strand=Plus/Plus Query 1 ATGGCAGTAAATATGGAAGGTGGAAACACACACTTTTACGATGAAATCGAACCCTTTTGT 60 ||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||| Sbjct 1 ATGGCAGTAAATATGGAAGGTTCACAGACACACTTTTACGATGAAATCGAACCCTTTTGT 60 Query 61 CGATGGAGAAGAATGGAAGACATCGACATTCTTGAGCTACATCTTCCTTCAGGTTTGAAG 120 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 CGATGGAGAAGAACGGAAGACATCGACATTCTTGAGCTACATCTTCCTTCAGGTTTGAAG 120 Query 121 AAAGAGCATCTTAAAATACAGATCAACCACAGTGGTGTACTAACAATAACAGGAGGCTGT 180 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 121 AAAGAGCATCTTAAAATACAGATCAACAACAGTGGTGTACTAACAATAACAGGAGGCTGT 180 Query 181 C-ATGTGGACCAGACCAAATCAATCAGGTTCATGAAAGAAACAAAAGTTGCGAAAA-ATT 238 | | |||||||| |||||| ||||||||||||||||||||||||||||||| |||| ||| Sbjct 181 CCA-GTGGACCAAACCAAAACAATCAGGTTCATGAAAGAAACAAAAGTTGC-AAAAGATT 238 Query 239 GTAAAAGAAATGAGATTCGCGCGAAGTTCTCAAAGGGAGTTTTGTATGTGACAATGCCAA 298 ||||||||||||||||||| || |||||||| |||||||||||||||||||| ||||||| Sbjct 239 GTAAAAGAAATGAGATTCGTGCAAAGTTCTCTAAGGGAGTTTTGTATGTGACGATGCCAA 298 Query 299 AGACAAGCCCTATAACAGCTGGTCCCTCGGTCGCTTTGAAGGGAGCCACATCACAA-ACT 357 |||||| ||||||| ||||||||| ||| || |||||||||||||||| ||||| | | Sbjct 299 AGACAATCCCTATAGCAGCTGGTCTCTCAGTTTCTTTGAAGGGAGCCACGCCACAACA-T 357 Query 358 CGAGACCC-TAAAACAGATGAGGATATGAGAAATGTAGCAAACTGTTCAAGTGAATTTTA 416 | | |||| |||||||||||||| |||||||||||| |||||||||||||| |||||||| Sbjct 358 CAA-ACCCCTAAAACAGATGAGGGTATGAGAAATGTTGCAAACTGTTCAAGCGAATTTTA 416 Query 417 TA-TCAAGTTTGGCTCATTGAAGCAAAGACTATGGAGGAAGACAGTAGTGGAGGGTGTGG 475 || | |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 417 TAGT-AAGTTTGGCTCATTGAAGCAAAGACTATGGAGGAAGACAGTAGTTGAGGGTGTGG 475 Query 476 CCGCTGTGGTGGTTGTGGCTGCTGCAGTTTTAGGTGTGGTTAAAGCGTACCAATATTTTA 535 |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct 476 CCGCTGTGGTGGTTGTGGCTGCTGCAGTTTTAGGAGTTGTTAAAGCGTACCAATATTTTA 535 Query 536 TGGCATCACCTGTGTGA 552 ||||||||||||||||| Sbjct 536 TGGCATCACCTGTGTGA 552 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 26473395469 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5